Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060322.seq
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0283 + 13887388-13887573,13887711-13887806,13888517-138886... 61 9e-10
04_04_0712 + 27476319-27476569,27477150-27477402,27477535-274779... 34 0.12
03_02_0650 + 10174905-10175000,10175321-10175376,10175467-101755... 33 0.16
02_05_0183 + 26537676-26537752,26538481-26538649,26538736-265389... 33 0.22
01_05_0090 + 18038219-18038421,18039365-18039488,18040229-180403... 32 0.38
06_03_0949 - 26262993-26263130,26263602-26263670,26263809-26264030 32 0.50
02_05_0699 + 31013176-31013345,31013749-31013872,31013950-310140... 32 0.50
11_08_0055 - 28095996-28096934 31 0.87
06_01_0929 - 7171395-7171676,7172019-7172219,7172438-7172524,717... 31 0.87
03_06_0226 + 32495088-32495237,32496189-32496351,32496438-324965... 31 0.87
03_05_0497 + 24932336-24932485,24934037-24934199,24934306-249344... 31 0.87
05_01_0411 + 3243025-3243092,3243348-3243496,3243740-3243872,324... 29 2.6
10_08_0184 - 15570471-15570684,15571085-15571354,15571489-155717... 29 3.5
05_01_0207 + 1493224-1493385,1493475-1493839,1494313-1494390,149... 29 3.5
01_05_0327 + 20984336-20985478 29 3.5
07_01_0042 - 334417-334431,334563-334688,334852-335136,335220-33... 29 4.6
01_04_0140 + 16572497-16572528,16572958-16573063,16573509-165735... 29 4.6
09_04_0165 + 15274448-15277336 28 6.1
08_02_1300 + 25972496-25972582,25972664-25972723,25973786-259738... 28 6.1
02_01_0717 + 5351504-5351602,5353401-5353499,5353574-5353675,535... 28 6.1
09_04_0594 - 18831011-18831360,18831562-18832111,18832364-188334... 28 8.1
06_01_1123 + 9257674-9258126,9258205-9258972 28 8.1
06_01_1119 - 9218735-9219529,9219809-9220330 28 8.1
06_01_1080 + 8836289-8836347,8836525-8836783,8836911-8837444,883... 28 8.1
05_04_0027 - 17298727-17299830 28 8.1
02_02_0600 + 12018256-12018502,12018943-12019073,12019104-12019553 28 8.1
01_01_1212 + 9763949-9764412,9765183-9765252,9765356-9765457 28 8.1
01_01_1190 + 9463973-9465732,9466210-9466440,9467664-9467793,946... 28 8.1
>04_03_0283 +
13887388-13887573,13887711-13887806,13888517-13888637,
13888734-13888840,13888949-13889166,13890219-13890396,
13890492-13890611,13891601-13891687,13892401-13892511,
13892618-13893439
Length = 681
Score = 60.9 bits (141), Expect = 9e-10
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 8/114 (7%)
Frame = +3
Query: 189 INISTSYILLLA*KTKRRSCKIAE------RCQCPNCVSKQLIIEQSQPYKSVKNFFV-- 344
I I T L L T R C+ A C+C C + YK + NF
Sbjct: 13 IFILTMIALPLVPYTIMRLCRAANVKAKTIHCRCSGCHRSGKY--RKSIYKRISNFSTCS 70
Query: 345 KLAIVSGWVLLGFLAYKVSQFDYEMSNFDPYEILGLPPGATQAEIXKSYRKQSL 506
L I+ W+++ FL Y + E+ F+PY ILGL PGA++++I KSYR+ S+
Sbjct: 71 NLTILLLWIVMIFLVYYIKHVSREVQVFEPYSILGLEPGASESDIKKSYRRLSI 124
>04_04_0712 +
27476319-27476569,27477150-27477402,27477535-27477914,
27479738-27479864,27479945-27480110,27480221-27480359,
27481854-27481987,27482087-27482229,27482367-27482565,
27482688-27483010
Length = 704
Score = 33.9 bits (74), Expect = 0.12
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +3
Query: 405 FDYEMSNFDPYEILGLPPGATQAEIXKSYRKQSL 506
F E +N YE+LG+P A++ E+ K+YRK ++
Sbjct: 292 FGMESNNTKYYEVLGVPKTASKDELKKAYRKAAI 325
>03_02_0650 +
10174905-10175000,10175321-10175376,10175467-10175540,
10176215-10176753,10176845-10177186,10177520-10177879,
10177982-10178193,10178881-10179169,10179469-10180152
Length = 883
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 423 NFDPYEILGLPPGATQAEIXKSYRKQSL 506
N DPY++LG+ A+Q +I K++ K SL
Sbjct: 27 NLDPYKVLGVDKSASQRDIQKAFHKLSL 54
>02_05_0183 +
26537676-26537752,26538481-26538649,26538736-26538910,
26539008-26539137,26540425-26540558,26540629-26540771,
26540894-26541092,26541183-26541514
Length = 452
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 381 FLAYKVSQFDYEMSNFDPYEILGLPPGATQAEIXKSYRKQSL 506
FL+ + + +N YE+LG+ ATQ E+ K+YRK ++
Sbjct: 29 FLSVMYGRMPKKSNNTKYYEVLGVSKTATQDELKKAYRKAAI 70
>01_05_0090 +
18038219-18038421,18039365-18039488,18040229-18040311,
18040401-18040473,18040584-18040688,18040803-18040853,
18041705-18041781,18041879-18042037,18043548-18043692,
18043776-18043884,18043959-18044107,18044175-18044258,
18044784-18044825,18045811-18046014
Length = 535
Score = 32.3 bits (70), Expect = 0.38
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRKQSLVCIL 518
DPYE+L +P ++ EI +YRK +L +L
Sbjct: 18 DPYEVLSVPRDSSDQEIKSAYRKLALKFVL 47
>06_03_0949 - 26262993-26263130,26263602-26263670,26263809-26264030
Length = 142
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRKQSL 506
D Y L LPPGAT+ E+ +++R+ +L
Sbjct: 48 DHYRTLRLPPGATKGEVKRAFRRLAL 73
>02_05_0699 +
31013176-31013345,31013749-31013872,31013950-31014032,
31014106-31014217,31014297-31014401,31014809-31014859,
31015893-31015979,31016325-31016402,31016477-31016530,
31016608-31016892
Length = 382
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRKQSL 506
DPYE+LG+ AT+ EI ++R+ +L
Sbjct: 31 DPYEVLGVGRNATEQEIKSAFRRMAL 56
>11_08_0055 - 28095996-28096934
Length = 312
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +1
Query: 118 MGGQKFEYDESGSTFFYFVLSFLALILVPATFYYWPKKRKEDPA 249
M Q+ + F+F+LS LA+ PA YY P+ +++ A
Sbjct: 1 MASQRRRSSAATIAVFFFLLSLLAVFFQPAAAYYHPQGKRQTVA 44
>06_01_0929 -
7171395-7171676,7172019-7172219,7172438-7172524,
7172973-7173023,7173883-7173987,7174074-7174185,
7174284-7174366,7174434-7174557,7174822-7174973
Length = 398
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRKQSL 506
DPYE+LG+ AT EI ++R+ +L
Sbjct: 25 DPYEVLGVGRNATDQEIKSAFRRMAL 50
>03_06_0226 +
32495088-32495237,32496189-32496351,32496438-32496576,
32496669-32496945,32497051-32497249,32497379-32497704
Length = 417
Score = 31.1 bits (67), Expect = 0.87
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 435 YEILGLPPGATQAEIXKSYRKQSL 506
YE+LG+P A+Q ++ K+YRK ++
Sbjct: 15 YEVLGVPKDASQDDLKKAYRKAAI 38
>03_05_0497 +
24932336-24932485,24934037-24934199,24934306-24934447,
24934528-24934804,24934887-24935085,24935169-24935491
Length = 417
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = +3
Query: 435 YEILGLPPGATQAEIXKSYRKQSL 506
YEILG+P A+Q ++ K+YRK ++
Sbjct: 15 YEILGVPKTASQDDLKKAYRKAAI 38
>05_01_0411 +
3243025-3243092,3243348-3243496,3243740-3243872,
3244740-3244860,3245065-3245181,3245303-3245389,
3245941-3246000,3246097-3246174,3246587-3246658,
3246767-3246925
Length = 347
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 435 YEILGLPPGATQAEIXKSYRKQSL 506
Y++L +P GA++ +I +SYRK +L
Sbjct: 27 YDVLQVPKGASEDQIKRSYRKLAL 50
>10_08_0184 -
15570471-15570684,15571085-15571354,15571489-15571711,
15571809-15571875,15571996-15572137,15572226-15572290
Length = 326
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 180 ISCINISTSYILLLA*KTKRRSCKIAERC 266
I+ NI +Y+LLL+ TK +SC C
Sbjct: 241 ITAANILLNYVLLLSRNTKSKSCPFCRAC 269
>05_01_0207 +
1493224-1493385,1493475-1493839,1494313-1494390,
1496134-1496157,1496213-1496654
Length = 356
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRKQSL 506
D Y++LG+ GAT E+ +SYR+ ++
Sbjct: 4 DYYKVLGVGRGATDEELKRSYRRLAM 29
>01_05_0327 + 20984336-20985478
Length = 380
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRKQSL 506
D Y+ILGL T ++ K+YRK SL
Sbjct: 130 DYYQILGLEKDCTVEDVRKAYRKLSL 155
>07_01_0042 -
334417-334431,334563-334688,334852-335136,335220-335368,
336239-336536,337030-337131,337245-337613,337973-338115,
338334-338518,339246-339475,339734-339821,340158-340253,
340397-340512,340604-340852,340950-341175,341411-341622
Length = 962
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 378 GFLAY-KVSQFDYEMSNFDPYEILGLPPGATQAE 476
G LAY S F YEM F PYE PP +AE
Sbjct: 403 GDLAYPNPSSFTYEMRFFSPYEYALQPPPWYRAE 436
>01_04_0140 +
16572497-16572528,16572958-16573063,16573509-16573567,
16573615-16573681,16573964-16573989,16574787-16574913,
16576542-16576609,16577223-16577329,16577837-16577902,
16579332-16579438
Length = 254
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Frame = -3
Query: 675 HGRSLMTXLKVHSCCIKQYLFPRESI*TI------PXSANLVCPL*ALMKAFS 535
H +++ ++ CCI QY+ +SI +I P +++C L A+ K FS
Sbjct: 119 HHANVVLSFQIRPCCIDQYIQHDDSIISIHEDIVYPDKNSIICRLEAIEKYFS 171
>09_04_0165 + 15274448-15277336
Length = 962
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 239 KILQNCRKMSVSKLC*QTTNHRTIAALQKREKFLCETCYSIWMGATWIS 385
K++Q R ++ + T IAALQ+ E FL +S+WM T ++
Sbjct: 912 KLMQEMRIKGIA--ADRVTYTNLIAALQRNENFLEAVKWSLWMKQTGVA 958
>08_02_1300 +
25972496-25972582,25972664-25972723,25973786-25973868,
25974120-25974166,25975194-25975352,25975466-25975644,
25975738-25975818,25975903-25976046,25976246-25976347
Length = 313
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3
Query: 435 YEILGLPPGATQAEIXKSY 491
Y++LG+ P AT++EI K+Y
Sbjct: 8 YDVLGVSPTATESEIKKAY 26
>02_01_0717 +
5351504-5351602,5353401-5353499,5353574-5353675,
5353756-5353815,5353900-5354006,5354114-5354196,
5354372-5354462,5354561-5354768
Length = 282
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +3
Query: 435 YEILGLPPGATQAEIXKSYRKQSL 506
YEILG+ A+Q EI K+Y K +L
Sbjct: 32 YEILGVERTASQQEIKKAYHKLAL 55
>09_04_0594 -
18831011-18831360,18831562-18832111,18832364-18833406,
18833496-18833760,18835194-18835340,18835431-18835511,
18835626-18835804,18835935-18836093,18836269-18836398,
18836935-18837094,18837337-18837419,18837865-18837915,
18838035-18838151,18838273-18838359
Length = 1133
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +3
Query: 435 YEILGLPPGATQAEIXKSY 491
Y++LG+ P AT+ EI K+Y
Sbjct: 8 YDVLGVSPTATEVEIKKAY 26
>06_01_1123 + 9257674-9258126,9258205-9258972
Length = 406
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 375 LGFLAYKVSQFDYEMSNFDPYEILGLPPGATQAEIXKSYRK---QSLVCILTK 524
LGFL ++ E+ FD L L G + A + S + QSL+C+L+K
Sbjct: 99 LGFLRWRWRPERCELPRFDAAAFLDLLRGKSMAFVGDSLSRNHMQSLLCLLSK 151
>06_01_1119 - 9218735-9219529,9219809-9220330
Length = 438
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 375 LGFLAYKVSQFDYEMSNFDPYEILGLPPGATQAEIXKSYRK---QSLVCILTK 524
LGFL ++ E+ FD L L G + A + S + QSL+C+L+K
Sbjct: 122 LGFLRWRWRPERCELPRFDAAAFLELVRGKSMAFVGDSLARNHMQSLMCLLSK 174
>06_01_1080 +
8836289-8836347,8836525-8836783,8836911-8837444,
8837527-8837636,8843938-8844129,8845062-8845203
Length = 431
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +3
Query: 375 LGFLAYKVSQFDYEMSNFDPYEILGLPPGATQAEIXKSYRK---QSLVCILTK 524
LGF+ ++ ++ DP L G T A I S K SL+C+LT+
Sbjct: 54 LGFVQWRWRPDGCDLPRLDPLRFLSAMRGKTLAFIGDSLAKNHMNSLICLLTR 106
>05_04_0027 - 17298727-17299830
Length = 367
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +3
Query: 423 NFDPYEILGLPPGATQAEIXKSYRKQSL 506
N D Y ILG+ + EI K+YRK SL
Sbjct: 104 NKDYYAILGVERSCSVEEIRKAYRKLSL 131
>02_02_0600 + 12018256-12018502,12018943-12019073,12019104-12019553
Length = 275
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRKQSL 506
D Y++L + GAT+ E+ K+YRK ++
Sbjct: 4 DYYKLLQVERGATEEELKKAYRKLAM 29
>01_01_1212 + 9763949-9764412,9765183-9765252,9765356-9765457
Length = 211
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRKQSL 506
D Y+ LGL AT+AE+ ++R+++L
Sbjct: 4 DHYQTLGLRQDATKAEVKAAFRRRAL 29
>01_01_1190 + 9463973-9465732,9466210-9466440,9467664-9467793,
9468723-9468888,9469528-9469859,9470284-9470513,
9471535-9471613,9471689-9471865
Length = 1034
Score = 27.9 bits (59), Expect = 8.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 435 YEILGLPPGATQAEIXKSYRKQSL 506
Y ILG+ P T +I K+YRK +L
Sbjct: 947 YLILGIEPSCTFLDIKKAYRKAAL 970
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,336,758
Number of Sequences: 37544
Number of extensions: 331227
Number of successful extensions: 741
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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