Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060322.seq
(692 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical ... 58 8e-09
AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical ... 58 8e-09
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 33 0.15
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 31 0.78
Z79603-11|CAI79234.1| 75|Caenorhabditis elegans Hypothetical p... 31 1.0
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical pr... 29 3.2
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 29 4.2
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 28 7.3
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 27 9.6
>AL032652-6|CAA21710.2| 752|Caenorhabditis elegans Hypothetical
protein Y63D3A.6b protein.
Length = 752
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/82 (28%), Positives = 42/82 (51%)
Frame = +3
Query: 264 CQCPNCVSKQLIIEQSQPYKSVKNFFVKLAIVSGWVLLGFLAYKVSQFDYEMSNFDPYEI 443
CQC C K+ ++P++ K + +V W + + K ++ + ++DPY+I
Sbjct: 52 CQCDGCDKKRRQKAANKPWRRTKKIITIVVLVVAWAIFAIIVKKTTEIEQTHKDYDPYQI 111
Query: 444 LGLPPGATQAEIXKSYRKQSLV 509
LGL GA + I K++R S +
Sbjct: 112 LGLDQGADEKAIKKAWRDMSKI 133
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1
Query: 118 MGGQKFEYDESGSTFFYFVLSFLALILVPATFYYWPKKRKEDP 246
MG FEYDE G+TF+Y +++F A+IL PAT+ P K +P
Sbjct: 1 MGRASFEYDEVGNTFYYVLVAFYAIILFPATYLCLPGASKPEP 43
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +1
Query: 574 VGTXWYRSNRFSGEQVLFDTTRMYF*XCHKTPSMPLKR 687
VG WY S ++S ++VL DTTRMY+ ++TP M + R
Sbjct: 211 VGMWWYSSIKYSADKVLLDTTRMYYYFINRTPRMEIGR 248
>AL032652-5|CAB63399.1| 579|Caenorhabditis elegans Hypothetical
protein Y63D3A.6a protein.
Length = 579
Score = 57.6 bits (133), Expect = 8e-09
Identities = 23/82 (28%), Positives = 42/82 (51%)
Frame = +3
Query: 264 CQCPNCVSKQLIIEQSQPYKSVKNFFVKLAIVSGWVLLGFLAYKVSQFDYEMSNFDPYEI 443
CQC C K+ ++P++ K + +V W + + K ++ + ++DPY+I
Sbjct: 52 CQCDGCDKKRRQKAANKPWRRTKKIITIVVLVVAWAIFAIIVKKTTEIEQTHKDYDPYQI 111
Query: 444 LGLPPGATQAEIXKSYRKQSLV 509
LGL GA + I K++R S +
Sbjct: 112 LGLDQGADEKAIKKAWRDMSKI 133
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +1
Query: 118 MGGQKFEYDESGSTFFYFVLSFLALILVPATFYYWPKKRKEDP 246
MG FEYDE G+TF+Y +++F A+IL PAT+ P K +P
Sbjct: 1 MGRASFEYDEVGNTFYYVLVAFYAIILFPATYLCLPGASKPEP 43
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = +1
Query: 574 VGTXWYRSNRFSGEQVLFDTTRMYF*XCHKTPSMPLKR 687
VG WY S ++S ++VL DTTRMY+ ++TP M + R
Sbjct: 211 VGMWWYSSIKYSADKVLLDTTRMYYYFINRTPRMEIGR 248
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRKQSL 506
D Y++LG+ GAT EI K+YRK +L
Sbjct: 4 DYYKVLGISKGATDDEIKKAYRKMAL 29
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 31.1 bits (67), Expect = 0.78
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRKQSL 506
+PY+IL L G T EI K+YR Q L
Sbjct: 8 NPYKILHLEKGCTDKEIQKAYRAQCL 33
>Z79603-11|CAI79234.1| 75|Caenorhabditis elegans Hypothetical
protein M163.9 protein.
Length = 75
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 108 DTYNGRSKIRI*RKWIYILLFCFIISCINISTSYILLLA*KTKR 239
D+++ ++ RKW Y +L C+ I+ + T +IL K+ R
Sbjct: 22 DSFHTLQTEKVARKWAYSILICYTIAAVAFMTIFILWFFKKSGR 65
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 435 YEILGLPPGATQAEIXKSYRKQSL 506
Y++LG+ P A+ E+ K+YRK +L
Sbjct: 8 YDVLGVKPDASDNELKKAYRKMAL 31
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +3
Query: 414 EMSNFDPYEILGLPPGATQAEIXKSYRKQSL 506
++S D Y++LG+ A++AEI +YRK +L
Sbjct: 12 KVSEMDFYQLLGVEKMASEAEIKSAYRKLAL 42
>Z49071-4|CAA88877.1| 166|Caenorhabditis elegans Hypothetical
protein T22C8.5 protein.
Length = 166
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3
Query: 231 TKRRSCKIAERCQCPNC 281
TKRR C ERC CPNC
Sbjct: 50 TKRRKC---ERCTCPNC 63
>Z68005-3|CAA91990.1| 1227|Caenorhabditis elegans Hypothetical
protein F59F3.1 protein.
Length = 1227
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 151 GSTFFYFVLSFLALILVPATFYYWPKKRKEDPAKLPKDVSV 273
GS FFY+ L+ L LI + A F K R + KD+++
Sbjct: 763 GSLFFYWFLALLLLISIIAVFLLTCKLRASNRLTKQKDIAL 803
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 435 YEILGLPPGATQAEIXKSYRKQSL 506
Y +LG+ AT EI K+YRK +L
Sbjct: 40 YNVLGIQKNATDDEIKKAYRKLAL 63
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 27.9 bits (59), Expect = 7.3
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRK 497
D Y+ILG+ A++ EI K+YRK
Sbjct: 379 DYYKILGVKRNASKREITKAYRK 401
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +3
Query: 429 DPYEILGLPPGATQAEIXKSYRKQS 503
D Y+ILG+ A + EI K+YRK +
Sbjct: 380 DYYKILGVRRNANKREITKAYRKMA 404
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,676,371
Number of Sequences: 27780
Number of extensions: 322521
Number of successful extensions: 809
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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