BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060321.seq
(669 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q24337 Cluster: Protein enhancer of rudimentary; n=33; ... 122 1e-26
UniRef50_Q93104 Cluster: Enhancer of rudimentary homolog; n=8; E... 121 1e-26
UniRef50_P84090 Cluster: Enhancer of rudimentary homolog; n=12; ... 109 4e-23
UniRef50_UPI0000F31727 Cluster: UPI0000F31727 related cluster; n... 71 3e-11
UniRef50_Q96319 Cluster: Enhancer of rudimentary homolog; n=26; ... 64 3e-09
UniRef50_Q20057 Cluster: Putative uncharacterized protein; n=2; ... 64 4e-09
UniRef50_A3FQA4 Cluster: Putative uncharacterized protein; n=1; ... 56 8e-07
UniRef50_A5KDS9 Cluster: Enhancer of rudimentary domain containi... 50 5e-05
UniRef50_A2Y411 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q4XLG6 Cluster: Pc-fam-4 protein, putative; n=3; Plasmo... 37 0.51
UniRef50_A5BQS2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q54VT8 Cluster: Putative uncharacterized protein; n=1; ... 34 2.7
UniRef50_Q7QV80 Cluster: GLP_438_8904_11054; n=1; Giardia lambli... 34 3.6
UniRef50_Q01DR4 Cluster: Modular polyketide synthase; n=1; Ostre... 33 6.2
UniRef50_Q67UF1 Cluster: Putative uncharacterized protein OJ1163... 33 8.2
UniRef50_A2EWP0 Cluster: Ankyrin repeat protein, putative; n=8; ... 33 8.2
UniRef50_Q6ZUP2 Cluster: CDNA FLJ43495 fis, clone PEBLM2000338; ... 33 8.2
>UniRef50_Q24337 Cluster: Protein enhancer of rudimentary; n=33;
Eukaryota|Rep: Protein enhancer of rudimentary -
Drosophila melanogaster (Fruit fly)
Length = 104
Score = 122 bits (293), Expect = 1e-26
Identities = 54/57 (94%), Positives = 55/57 (96%)
Frame = +2
Query: 83 MSHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQL 253
MSHTILLVQPG RPETRTY DYESVN+CMEGVCKIYEEHLKRRNPNTPTITYDISQL
Sbjct: 1 MSHTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQL 57
Score = 85.0 bits (201), Expect = 1e-15
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +1
Query: 256 DFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQSD 390
DF+D + D+SC+VYQKSTNTYAPYNKDWIKEKIYVLLRQAA S+
Sbjct: 59 DFIDTMVDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAAFSSN 103
>UniRef50_Q93104 Cluster: Enhancer of rudimentary homolog; n=8;
Eumetazoa|Rep: Enhancer of rudimentary homolog - Aedes
aegypti (Yellowfever mosquito)
Length = 103
Score = 121 bits (292), Expect = 1e-26
Identities = 54/57 (94%), Positives = 55/57 (96%)
Frame = +2
Query: 83 MSHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQL 253
MSHTILLVQPG PETRTYSDYESVN+CMEGVCKIYEEHLKRRNPNTPTITYDISQL
Sbjct: 1 MSHTILLVQPGRNPETRTYSDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQL 57
Score = 94.3 bits (224), Expect = 2e-18
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +1
Query: 256 DFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQSD 390
DFVDQLADLSCLVYQKSTNTYAPYNK+WIKEKIYVLLRQAAG +D
Sbjct: 59 DFVDQLADLSCLVYQKSTNTYAPYNKEWIKEKIYVLLRQAAGTTD 103
>UniRef50_P84090 Cluster: Enhancer of rudimentary homolog; n=12;
Tetrapoda|Rep: Enhancer of rudimentary homolog - Homo
sapiens (Human)
Length = 104
Score = 109 bits (263), Expect = 4e-23
Identities = 48/57 (84%), Positives = 53/57 (92%)
Frame = +2
Query: 83 MSHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQL 253
MSHTILLVQP RPE RTY+DYESVN+CMEGVCK+YEEHLKR NPN+P+ITYDISQL
Sbjct: 1 MSHTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQL 57
Score = 76.6 bits (180), Expect = 5e-13
Identities = 33/44 (75%), Positives = 37/44 (84%)
Frame = +1
Query: 256 DFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQS 387
DF+D LADLSCLVY+ T TY PYNKDWIKEKIYVLLR+ A Q+
Sbjct: 59 DFIDDLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQAQQA 102
>UniRef50_UPI0000F31727 Cluster: UPI0000F31727 related cluster; n=1;
Bos taurus|Rep: UPI0000F31727 UniRef100 entry - Bos
Taurus
Length = 103
Score = 70.5 bits (165), Expect = 3e-11
Identities = 30/36 (83%), Positives = 34/36 (94%)
Frame = +2
Query: 146 YESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQL 253
YESVN+ MEGVCK+YEEHLKR NPN+P+ITYDISQL
Sbjct: 20 YESVNERMEGVCKMYEEHLKRMNPNSPSITYDISQL 55
Score = 36.3 bits (80), Expect = 0.67
Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Frame = +1
Query: 88 SHNFAGAARSEARNQDXXXXXXXXXXHGGCV*NI*GTSEKAKP*YTHYHVRYITTLDFVD 267
SH+ AG A EAR Q+ G C ++ P DF+D
Sbjct: 2 SHHLAGIAYQEARRQNLRYESVNERMEGVCK-MYEEHLKRMNPNSPSITYDISQLFDFID 60
Query: 268 QLADL--SCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAA 378
LADL SCL+ +K ++T + W K I++ AA
Sbjct: 61 DLADLSFSCLLKKKKSSTDFTQLRQWSKNNIFLWAFPAA 99
>UniRef50_Q96319 Cluster: Enhancer of rudimentary homolog; n=26;
Magnoliophyta|Rep: Enhancer of rudimentary homolog -
Arabidopsis thaliana (Mouse-ear cress)
Length = 109
Score = 64.1 bits (149), Expect = 3e-09
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = +2
Query: 89 HTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQL 253
HTI+L+Q P TRT+ DY+S+ M+G+C +YE LK NP+ I+YDI+ L
Sbjct: 9 HTIILLQNSPSRATRTFMDYDSIGQAMDGICGLYERKLKEINPSLRNISYDIADL 63
Score = 48.4 bits (110), Expect = 2e-04
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1
Query: 256 DFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAA 378
+F+D LADLS LVY S + Y PY++ WIK+K + L++ A
Sbjct: 65 NFIDGLADLSALVYDHSISAYLPYDRQWIKQKAFHHLKRIA 105
>UniRef50_Q20057 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 113
Score = 63.7 bits (148), Expect = 4e-09
Identities = 25/56 (44%), Positives = 42/56 (75%)
Frame = +2
Query: 86 SHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQL 253
SHT+LL+Q PR ++RT+ DYESV D ++ +CK++E+ L ++ + +TYD+SQ+
Sbjct: 5 SHTVLLIQTSPRLDSRTWGDYESVTDALDALCKMFEDFLSKK--SAAPVTYDVSQV 58
Score = 39.1 bits (87), Expect = 0.095
Identities = 12/38 (31%), Positives = 27/38 (71%)
Frame = +1
Query: 256 DFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLR 369
+F+D+L+D+S +++ + T Y + WIK+++Y ++R
Sbjct: 60 EFLDKLSDVSMMIFNRETGQYIGRTRAWIKQQVYEMMR 97
>UniRef50_A3FQA4 Cluster: Putative uncharacterized protein; n=1;
Cryptosporidium parvum Iowa II|Rep: Putative
uncharacterized protein - Cryptosporidium parvum Iowa II
Length = 106
Score = 56.0 bits (129), Expect = 8e-07
Identities = 24/55 (43%), Positives = 35/55 (63%)
Frame = +2
Query: 89 HTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQL 253
HT+LL+Q TR+Y DY+SV+ ++GVC+IYE+ +K N +TY I L
Sbjct: 8 HTLLLIQYSNNISTRSYMDYDSVSQAVDGVCQIYEQSIKCAFSNLKEVTYSIEDL 62
>UniRef50_A5KDS9 Cluster: Enhancer of rudimentary domain containing
protein; n=3; Plasmodium|Rep: Enhancer of rudimentary
domain containing protein - Plasmodium vivax
Length = 105
Score = 50.0 bits (114), Expect = 5e-05
Identities = 20/56 (35%), Positives = 36/56 (64%)
Frame = +2
Query: 86 SHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQL 253
S +LLVQ + E+RT+ +Y S+ + G+C++YE+ +K +P ITY+++ L
Sbjct: 6 SDVVLLVQFSRKIESRTFVEYNSLKLALNGICQLYEQAIKENDPTVQRITYNMNDL 61
Score = 35.5 bits (78), Expect = 1.2
Identities = 11/42 (26%), Positives = 27/42 (64%)
Frame = +1
Query: 259 FVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQ 384
++D + ++ +++ + + TY P++K WIK+K+ ++ GQ
Sbjct: 64 YIDNIQKMTLMLFHQPSWTYKPHDKKWIKQKLVEHIKDQIGQ 105
>UniRef50_A2Y411 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 376
Score = 44.0 bits (99), Expect = 0.003
Identities = 16/43 (37%), Positives = 31/43 (72%)
Frame = +1
Query: 256 DFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQ 384
+F+D L D+S LV+ +S + + PY++ WIK++++ L++ A Q
Sbjct: 334 NFIDGLTDISALVFDRSLHAFLPYDRRWIKQEMFQHLKRLAQQ 376
>UniRef50_Q4XLG6 Cluster: Pc-fam-4 protein, putative; n=3;
Plasmodium chabaudi|Rep: Pc-fam-4 protein, putative -
Plasmodium chabaudi
Length = 622
Score = 36.7 bits (81), Expect = 0.51
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Frame = +1
Query: 247 TTLDFVDQLADLSCLVYQKS--TNTYAPYNKD---WIKEKIYVLLRQAAGQSD-*DYKKN 408
T D ++ LA +++++S TN Y+ Y++ W+ +K+Y + ++ GQ D +Y
Sbjct: 38 TNEDSINALAAYIIMIFKRSIKTNEYSHYDECLLMWLSDKLYKMHLKSIGQKDTAEYMDG 97
Query: 409 STLRTPYSVNLKKYIV 456
+TL Y LK Y V
Sbjct: 98 TTLNQAYDNYLKNYKV 113
>UniRef50_A5BQS2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 128
Score = 34.7 bits (76), Expect = 2.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +2
Query: 170 EGVCKIYEEHLKRRNPNTPTITYDISQL 253
+G+C +YE LK NP ITYDI+ L
Sbjct: 47 KGICGLYERKLKDLNPANQNITYDIADL 74
>UniRef50_Q54VT8 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 539
Score = 34.3 bits (75), Expect = 2.7
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 44 FILFN*NLKGPLNMSHTILLVQPGPRP---ETRTYSDYESVNDCMEGVCKIYEEH 199
FILF+ N G + +SH ILL Q P P E ESVN C++ V K Y E+
Sbjct: 17 FILFDKN--GDIVLSHQILLTQHHPHPGWVEHDGNEILESVNKCIQVVMKQYYEN 69
>UniRef50_Q7QV80 Cluster: GLP_438_8904_11054; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_438_8904_11054 - Giardia lamblia
ATCC 50803
Length = 716
Score = 33.9 bits (74), Expect = 3.6
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Frame = -3
Query: 463 VIQLCIFSSLHCTVFLKLSFFYNLNHSVRPLDAIKHISFPLSNLCCRVRMCL*ISDKLN- 287
V QLCI T+ KLS FY++N S+ L AI+++ + +L C+ + I+D +N
Sbjct: 363 VYQLCI-QKRPFTIVEKLSTFYSVNRSIVTLQAIEYVR-RIDSLLCK-SLSRSINDVVNM 419
Query: 286 SSDLPTGL-QNREL*YIVRDSGCIRVSPFQMFLIYFTHTLHAVVDAFVV 143
+SD + L L ++ R + F+++FT L + AF V
Sbjct: 420 ASDTLSRLAMATSLGNVLNLDRIYRKFCYSHFMVWFTE-LDTIKSAFSV 467
>UniRef50_Q01DR4 Cluster: Modular polyketide synthase; n=1;
Ostreococcus tauri|Rep: Modular polyketide synthase -
Ostreococcus tauri
Length = 6222
Score = 33.1 bits (72), Expect = 6.2
Identities = 26/73 (35%), Positives = 34/73 (46%)
Frame = -3
Query: 439 SLHCTVFLKLSFFYNLNHSVRPLDAIKHISFPLSNLCCRVRMCL*ISDKLNSSDLPTGLQ 260
++H F++ + H V L H F L + C R+ L LN L T L
Sbjct: 81 AVHTATFMRDTLGAEPGHVVGVLSRNSHEVFVLHHACAMARVKL-----LN---LNTHLV 132
Query: 259 NREL*YIVRDSGC 221
REL YIVRD+GC
Sbjct: 133 ARELSYIVRDAGC 145
>UniRef50_Q67UF1 Cluster: Putative uncharacterized protein
OJ1163_C07.30; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OJ1163_C07.30 - Oryza sativa subsp. japonica (Rice)
Length = 231
Score = 32.7 bits (71), Expect = 8.2
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 204 KGETLIHPLSRTIYHNSRFCRPVGRSELFSLSEIYKHIR 320
KG TL+ P + N R C G S + S E+ KH+R
Sbjct: 117 KGYTLVEPAREQLNQNKRSCMQDGCSYMGSYGELCKHVR 155
>UniRef50_A2EWP0 Cluster: Ankyrin repeat protein, putative; n=8;
Trichomonas vaginalis G3|Rep: Ankyrin repeat protein,
putative - Trichomonas vaginalis G3
Length = 342
Score = 32.7 bits (71), Expect = 8.2
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = -3
Query: 472 LYYVIQLCIF-SSLHCTVFLKLSFFYNLNHSVRPLDAIKHISFPLSNLCCRVRM----CL 308
+Y +++LC + S++C FL+ F +NH+ + + N C + + C+
Sbjct: 67 VYSLLELCCYYGSVNCFKFLRTEFNLQINHTCLEFSFLGG-KPDIMNECLKYQTPDQNCM 125
Query: 307 *ISDKLNSSDLPTGLQNREL*YIVRDSGCIRVSPFQMFLIYFTHT 173
++ ++ D T L N E + S CI+ + Q F +Y T
Sbjct: 126 VLAIASHNIDFVTFLMN-EYDLKIDLSACIKFNNLQAFFVYLDQT 169
>UniRef50_Q6ZUP2 Cluster: CDNA FLJ43495 fis, clone PEBLM2000338;
n=2; Homo sapiens|Rep: CDNA FLJ43495 fis, clone
PEBLM2000338 - Homo sapiens (Human)
Length = 148
Score = 32.7 bits (71), Expect = 8.2
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = -1
Query: 438 VYTVRCS*S*VFFIILITLSGRLTQ*NIYLFLYPIFVVGCVCVCRFLIN*TAQICQLVYK 259
VYT C ++ I I + + +Y+++ I++ CVCVC I+ +C +
Sbjct: 3 VYTYICEYRCIYVCIYIHVFVYVCYIYLYVYVCVIYIHVCVCVCVLYIHVCVYVCVYALR 62
Query: 258 IESC 247
++C
Sbjct: 63 RQNC 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,051,177
Number of Sequences: 1657284
Number of extensions: 12718286
Number of successful extensions: 28152
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 27290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28137
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -