Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060321.seq
(669 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.42
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.42
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.42
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.42
AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory recept... 23 2.3
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 23 2.3
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 23 3.0
AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 22 4.0
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 5.2
DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8 prot... 21 6.9
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 21 6.9
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 21 6.9
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 21 6.9
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 9.1
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 21 9.1
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 25.4 bits (53), Expect = 0.42
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -3
Query: 205 FQMFLI-YFTHTLHAV-VDAFVV*VSPGFGPRTGLHQQNCVTHV*RTFKILIK*YKRSVV 32
F FLI +FT TLH V + + + P G NC+ V +L + K S
Sbjct: 164 FSHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSNKESQR 223
Query: 31 FI 26
F+
Sbjct: 224 FL 225
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 25.4 bits (53), Expect = 0.42
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -3
Query: 205 FQMFLI-YFTHTLHAV-VDAFVV*VSPGFGPRTGLHQQNCVTHV*RTFKILIK*YKRSVV 32
F FLI +FT TLH V + + + P G NC+ V +L + K S
Sbjct: 164 FSHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSNKESQR 223
Query: 31 FI 26
F+
Sbjct: 224 FL 225
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 25.4 bits (53), Expect = 0.42
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -3
Query: 205 FQMFLI-YFTHTLHAV-VDAFVV*VSPGFGPRTGLHQQNCVTHV*RTFKILIK*YKRSVV 32
F FLI +FT TLH V + + + P G NC+ V +L + K S
Sbjct: 164 FSHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSNKESQR 223
Query: 31 FI 26
F+
Sbjct: 224 FL 225
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 25.4 bits (53), Expect = 0.42
Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -3
Query: 205 FQMFLI-YFTHTLHAV-VDAFVV*VSPGFGPRTGLHQQNCVTHV*RTFKILIK*YKRSVV 32
F FLI +FT TLH V + + + P G NC+ V +L + K S
Sbjct: 164 FSHFLIVFFTETLHTVGIALLIFYILPDLDVVKGAMLTNCICFVPGVLGLLSRSNKESQR 223
Query: 31 FI 26
F+
Sbjct: 224 FL 225
>AM292356-1|CAL23168.2| 251|Tribolium castaneum gustatory receptor
candidate 35 protein.
Length = 251
Score = 23.0 bits (47), Expect = 2.3
Identities = 8/37 (21%), Positives = 20/37 (54%)
Frame = -1
Query: 360 NIYLFLYPIFVVGCVCVCRFLIN*TAQICQLVYKIES 250
N++LF+ + ++ + +C ++ I YK+E+
Sbjct: 155 NVWLFILWVGILSTIFLCDTILKKVDDILSQAYKLEA 191
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 23.0 bits (47), Expect = 2.3
Identities = 9/34 (26%), Positives = 19/34 (55%)
Frame = -3
Query: 490 IIISLLLYYVIQLCIFSSLHCTVFLKLSFFYNLN 389
+II L +YY I ++H + + + +FY ++
Sbjct: 232 LIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMH 265
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = +2
Query: 122 PETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTP 226
P+ R + V E + + EE+ + +PN P
Sbjct: 324 PDVRGIKSVQEVEMLREKIYGVLEEYTRTTHPNEP 358
>AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor
candidate 38 protein.
Length = 436
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/35 (25%), Positives = 16/35 (45%)
Frame = -2
Query: 521 LKSLTDNFSKHNNFSLTVLCYTTMYFFKFTLYGVL 417
L L + + +++T LC T+YG+L
Sbjct: 273 LSKLIRDVGNASGYTVTFLCLYLFLIITLTIYGLL 307
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.8 bits (44), Expect = 5.2
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 518 KSLTDNFSKHNNFSLTVLCYTT 453
+++ K+ N+S+ VL YT+
Sbjct: 1161 ETILHGLKKYTNYSMEVLAYTS 1182
>DQ659248-1|ABG47446.1| 496|Tribolium castaneum chitinase 8
protein.
Length = 496
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 111 PVRGPKPGLTQTTKASTT 164
PV P+P TQTT++ T
Sbjct: 395 PVPTPEPQPTQTTESEPT 412
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 465 MLYNYVFFQVYTV 427
MLY YVF+ V TV
Sbjct: 88 MLYAYVFYVVTTV 100
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 465 MLYNYVFFQVYTV 427
MLY YVF+ V TV
Sbjct: 88 MLYAYVFYVVTTV 100
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 465 MLYNYVFFQVYTV 427
MLY YVF+ V TV
Sbjct: 88 MLYAYVFYVVTTV 100
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.1
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = -3
Query: 511 LQIIFPNIIISLLLYYVIQLCIFSSLHCTV 422
LQ+I ++ + + YV+ + F S+ C++
Sbjct: 326 LQLINHRVVFTAMGLYVLNMEHFFSVKCSI 355
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 21.0 bits (42), Expect = 9.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 529 FDH*RVLQIIFPNIIISLLLYYVIQLCIFSSLHC 428
FD+ VL++ N SL Y + +F+ +HC
Sbjct: 505 FDYCTVLRVQRFNNYQSLAHYLRVFFTVFNVVHC 538
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,611
Number of Sequences: 336
Number of extensions: 3685
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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