Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060321.seq
         (669 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36921-1|AAA74593.1|  104|Drosophila melanogaster enhancer of ru...   122   6e-28
BT001470-1|AAN71225.1|  104|Drosophila melanogaster LD03564p pro...   122   6e-28
AE014298-1245|AAF46422.1|  104|Drosophila melanogaster CG1871-PB...   122   6e-28
AE014298-1244|AAF46421.1|  104|Drosophila melanogaster CG1871-PA...   122   6e-28

>L36921-1|AAA74593.1|  104|Drosophila melanogaster enhancer of
           rudimentary protein protein.
          Length = 104

 Score =  122 bits (293), Expect = 6e-28
 Identities = 54/57 (94%), Positives = 55/57 (96%)
 Frame = +2

Query: 83  MSHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQL 253
           MSHTILLVQPG RPETRTY DYESVN+CMEGVCKIYEEHLKRRNPNTPTITYDISQL
Sbjct: 1   MSHTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQL 57



 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = +1

Query: 256 DFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQSD 390
           DF+D + D+SC+VYQKSTNTYAPYNKDWIKEKIYVLLRQAA  S+
Sbjct: 59  DFIDTMVDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAAFSSN 103


>BT001470-1|AAN71225.1|  104|Drosophila melanogaster LD03564p
           protein.
          Length = 104

 Score =  122 bits (293), Expect = 6e-28
 Identities = 54/57 (94%), Positives = 55/57 (96%)
 Frame = +2

Query: 83  MSHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQL 253
           MSHTILLVQPG RPETRTY DYESVN+CMEGVCKIYEEHLKRRNPNTPTITYDISQL
Sbjct: 1   MSHTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQL 57



 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = +1

Query: 256 DFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQSD 390
           DF+D + D+SC+VYQKSTNTYAPYNKDWIKEKIYVLLRQAA  S+
Sbjct: 59  DFIDTMVDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAAFSSN 103


>AE014298-1245|AAF46422.1|  104|Drosophila melanogaster CG1871-PB,
           isoform B protein.
          Length = 104

 Score =  122 bits (293), Expect = 6e-28
 Identities = 54/57 (94%), Positives = 55/57 (96%)
 Frame = +2

Query: 83  MSHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQL 253
           MSHTILLVQPG RPETRTY DYESVN+CMEGVCKIYEEHLKRRNPNTPTITYDISQL
Sbjct: 1   MSHTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQL 57



 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = +1

Query: 256 DFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQSD 390
           DF+D + D+SC+VYQKSTNTYAPYNKDWIKEKIYVLLRQAA  S+
Sbjct: 59  DFIDTMVDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAAFSSN 103


>AE014298-1244|AAF46421.1|  104|Drosophila melanogaster CG1871-PA,
           isoform A protein.
          Length = 104

 Score =  122 bits (293), Expect = 6e-28
 Identities = 54/57 (94%), Positives = 55/57 (96%)
 Frame = +2

Query: 83  MSHTILLVQPGPRPETRTYSDYESVNDCMEGVCKIYEEHLKRRNPNTPTITYDISQL 253
           MSHTILLVQPG RPETRTY DYESVN+CMEGVCKIYEEHLKRRNPNTPTITYDISQL
Sbjct: 1   MSHTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQL 57



 Score = 85.0 bits (201), Expect = 8e-17
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = +1

Query: 256 DFVDQLADLSCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAAGQSD 390
           DF+D + D+SC+VYQKSTNTYAPYNKDWIKEKIYVLLRQAA  S+
Sbjct: 59  DFIDTMVDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAAFSSN 103


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,746,232
Number of Sequences: 53049
Number of extensions: 591490
Number of successful extensions: 1293
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1269
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)