Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060320.seq
(658 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 130 7e-31
02_04_0017 + 18937774-18937864,18938505-18940945 130 7e-31
01_06_0662 + 30987187-30987277,30987825-30990214 128 4e-30
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 121 4e-28
03_05_0511 + 25056018-25059107 70 2e-12
02_04_0148 - 20198407-20201424 67 1e-11
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 66 2e-11
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 62 4e-10
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 54 1e-07
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 52 5e-07
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 50 2e-06
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 45 5e-05
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 43 2e-04
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 42 3e-04
02_04_0462 + 23131433-23132836 33 0.15
03_01_0548 + 4099386-4099847,4100435-4101316 31 0.61
03_01_0547 + 4093196-4093657,4094267-4095148 31 0.61
03_01_0544 + 4082528-4082989,4083585-4084466 31 0.61
03_01_0543 + 4076981-4077442,4078145-4079026 31 0.61
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 30 1.9
08_02_0059 - 11778739-11780998,11781744-11781751 29 2.5
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 29 3.3
05_04_0199 + 18980017-18980759,18981478-18981532 29 3.3
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 28 5.7
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 28 5.7
01_06_1466 + 37559600-37559795,37560597-37560730,37561252-375614... 28 7.5
01_01_0699 + 5405178-5405356,5405478-5405693,5405808-5405919,540... 28 7.5
09_04_0743 - 19862847-19864745,19865875-19866912 27 9.9
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 27 9.9
04_04_0577 + 26349205-26349669,26350384-26350482,26350887-263510... 27 9.9
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 130 bits (315), Expect = 7e-31
Identities = 69/133 (51%), Positives = 88/133 (66%)
Frame = +1
Query: 259 RCITIKSTAISMFFELEEKXLVFITNPDQREKSEXXFLINLIDSXGHVDFSSEVTAALRV 438
R ITIKST IS+F+E+ ++ L +R+ +E +LINLIDS GHVDFSSEVTAALR+
Sbjct: 66 RGITIKSTGISLFYEMSDESLKLYKG--ERDGNE--YLINLIDSPGHVDFSSEVTAALRI 121
Query: 439 TDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNKMDRXXXXXXXXXXXXYQTXQRI 618
TDGAL QTETVLR+A+ RI+P+L +NKMDR YQT R+
Sbjct: 122 TDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSRV 181
Query: 619 VENVNVLIATYND 657
+EN NV++ATY D
Sbjct: 182 IENANVIMATYED 194
Score = 74.1 bits (174), Expect = 9e-14
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +2
Query: 65 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 187
MV FTV+E+R +MDKK NIRNMSVIAHVDHGKSTLTDSLV+
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVA 41
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 130 bits (315), Expect = 7e-31
Identities = 69/133 (51%), Positives = 88/133 (66%)
Frame = +1
Query: 259 RCITIKSTAISMFFELEEKXLVFITNPDQREKSEXXFLINLIDSXGHVDFSSEVTAALRV 438
R ITIKST IS+F+E+ ++ L +R+ +E +LINLIDS GHVDFSSEVTAALR+
Sbjct: 66 RGITIKSTGISLFYEMSDESLKLYKG--ERDGNE--YLINLIDSPGHVDFSSEVTAALRI 121
Query: 439 TDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNKMDRXXXXXXXXXXXXYQTXQRI 618
TDGAL QTETVLR+A+ RI+P+L +NKMDR YQT R+
Sbjct: 122 TDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVEGEEAYQTFSRV 181
Query: 619 VENVNVLIATYND 657
+EN NV++ATY D
Sbjct: 182 IENANVIMATYED 194
Score = 74.1 bits (174), Expect = 9e-14
Identities = 34/41 (82%), Positives = 38/41 (92%)
Frame = +2
Query: 65 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 187
MV FTV+E+R +MDKK NIRNMSVIAHVDHGKSTLTDSLV+
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVA 41
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 128 bits (309), Expect = 4e-30
Identities = 68/133 (51%), Positives = 88/133 (66%)
Frame = +1
Query: 259 RCITIKSTAISMFFELEEKXLVFITNPDQREKSEXXFLINLIDSXGHVDFSSEVTAALRV 438
R ITIKST IS+++E+ ++ L + R+ +E +LINLIDS GHVDFSSEVTAALR+
Sbjct: 66 RGITIKSTGISLYYEMSDESLK--SYKGDRDGNE--YLINLIDSPGHVDFSSEVTAALRI 121
Query: 439 TDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNKMDRXXXXXXXXXXXXYQTXQRI 618
TDGAL QTETVLR+A+ RI+P+L +NKMDR YQT R+
Sbjct: 122 TDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVGGEEAYQTFSRV 181
Query: 619 VENVNVLIATYND 657
+EN NV++ATY D
Sbjct: 182 IENANVIMATYED 194
Score = 73.3 bits (172), Expect = 2e-13
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +2
Query: 65 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 187
MV FTV+E+R +MDKK NIRNMSV+AHVDHGKSTLTDSLV+
Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVA 41
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 121 bits (292), Expect = 4e-28
Identities = 64/133 (48%), Positives = 84/133 (63%)
Frame = +1
Query: 259 RCITIKSTAISMFFELEEKXLVFITNPDQREKSEXXFLINLIDSXGHVDFSSEVTAALRV 438
R ITIKST IS+++E+ + L + ++ +LINLIDS GH+DFSSEVTAALR+
Sbjct: 66 RGITIKSTGISLYYEMTDAAL----RSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRI 121
Query: 439 TDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNKMDRXXXXXXXXXXXXYQTXQRI 618
TDGAL QTETVLR+++A RIKP+L +NKMDR YQ R+
Sbjct: 122 TDGALVVVDCIEGVCVQTETVLRQSLAERIKPVLTVNKMDRCFLELQQSGEEAYQAFSRV 181
Query: 619 VENVNVLIATYND 657
+E+VNV +A Y D
Sbjct: 182 IESVNVTMAPYED 194
Score = 71.7 bits (168), Expect = 5e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +2
Query: 65 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 187
MV FT +E+R MDKK NIRNMSVIAHVDHGKSTLTDSLV+
Sbjct: 1 MVRFTAEELRASMDKKDNIRNMSVIAHVDHGKSTLTDSLVA 41
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 69.7 bits (163), Expect = 2e-12
Identities = 34/87 (39%), Positives = 47/87 (54%)
Frame = +1
Query: 373 INLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNK 552
+NLIDS GH+DF SEV++A R++D AL QT LR+A R++P L +NK
Sbjct: 77 VNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEGVHIQTHAALRQAFLERLRPCLVLNK 136
Query: 553 MDRXXXXXXXXXXXXYQTXQRIVENVN 633
+DR Y RI+ +VN
Sbjct: 137 LDRLISELHLTPAEAYTRLHRIISDVN 163
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +2
Query: 113 RNIRNMSVIAHVDHGKSTLTDSLVS 187
R +RN ++AHVDHGK+TL D LV+
Sbjct: 8 RRVRNTCILAHVDHGKTTLADHLVA 32
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/87 (39%), Positives = 46/87 (52%)
Frame = +1
Query: 373 INLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNK 552
++LIDS GH+DF SEV+AA R+ D AL QT LR+A R++P L +NK
Sbjct: 89 VHLIDSPGHIDFCSEVSAAARLADSALVLVDAAEGVRVQTHAALRQAFVERLRPCLVLNK 148
Query: 553 MDRXXXXXXXXXXXXYQTXQRIVENVN 633
+DR + +RIV VN
Sbjct: 149 VDRLVAELRLTPAEAHARLRRIVSEVN 175
Score = 37.1 bits (82), Expect = 0.012
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +2
Query: 113 RNIRNMSVIAHVDHGKSTLTDSLVS 187
R +RN ++AHVDHGK++L D L++
Sbjct: 14 RRVRNTCILAHVDHGKTSLADHLIA 38
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 66.1 bits (154), Expect = 2e-11
Identities = 41/137 (29%), Positives = 72/137 (52%)
Frame = +1
Query: 247 GRTXRCITIKSTAISMFFELEEKXLVFITNPDQREKSEXXFLINLIDSXGHVDFSSEVTA 426
G T + +T ++ IS+++E+ E L + D+R + LINLIDS + S++V
Sbjct: 248 GITSQEVTESNSLISLYYEMPEDSLR--SYKDKRAGN--GHLINLIDSPVCCNLSNDVQP 303
Query: 427 ALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNKMDRXXXXXXXXXXXXYQT 606
AL + DGAL T+T +R A+ +I+P+ +NK+DR YQT
Sbjct: 304 ALCIMDGALVVVDSFEGVTLWTKTSIREALNMKIQPVFTLNKIDRFFLEQNVDGEKAYQT 363
Query: 607 XQRIVENVNVLIATYND 657
++++VN ++++ D
Sbjct: 364 LSSLIDSVNATMSSHKD 380
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +2
Query: 83 DEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 187
+E+ +M K NIRN+ VIA HGK+ + DSLV+
Sbjct: 211 EELHSIMCNKNNIRNVLVIADAGHGKTAILDSLVA 245
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 62.1 bits (144), Expect = 4e-10
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +1
Query: 367 FLINLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFM 546
+L N++D+ GHV+FS E+TAALR+ DGA+ TE +R A R+ ++ +
Sbjct: 219 YLCNIMDTPGHVNFSDEMTAALRIADGAVLVVDAAEGVMVNTERAIRHATQERLPIVVVI 278
Query: 547 NKMDRXXXXXXXXXXXXYQTXQRIVENVNVLIAT 648
NK+DR Y + +E +N LI++
Sbjct: 279 NKVDRLITELKLPPNDAYFKLRHTLEAINDLISS 312
Score = 32.3 bits (70), Expect = 0.35
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 77 TVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 190
T D + G+ +RN++++ H+ HGK+ D LV +
Sbjct: 134 TTDFLLGLAANPALVRNVALVGHLQHGKTVFMDMLVEQ 171
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/65 (41%), Positives = 38/65 (58%)
Frame = +1
Query: 367 FLINLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFM 546
+ +N+ID+ GHVDF+ EV ALRV DGA+ Q+ TV R+ I + F+
Sbjct: 136 YQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEIPRVAFI 195
Query: 547 NKMDR 561
NK+DR
Sbjct: 196 NKLDR 200
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 86 EIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLV 184
E+ + +RN+ + AH+D GK+TLT+ ++
Sbjct: 57 EVARWRESMDRMRNIGISAHIDSGKTTLTERVL 89
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 51.6 bits (118), Expect = 5e-07
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +1
Query: 373 INLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNK 552
+N++D+ GH DF EV + + +GA+ QT+ VL +A+ ++PIL +NK
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLSKALKYGLRPILLLNK 184
Query: 553 MDR 561
+DR
Sbjct: 185 VDR 187
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2
Query: 95 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLV 184
G +D R IRN++VIAHVDHGK+TL D L+
Sbjct: 57 GALDPSR-IRNVAVIAHVDHGKTTLMDRLL 85
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 49.6 bits (113), Expect = 2e-06
Identities = 33/101 (32%), Positives = 46/101 (45%)
Frame = +1
Query: 259 RCITIKSTAISMFFELEEKXLVFITNPDQREKSEXXFLINLIDSXGHVDFSSEVTAALRV 438
R IT+K+ +MF+ L PD +L+NLID+ GHVDFS EV+ +L
Sbjct: 103 RGITVKAQTATMFYRHANNQLPASDQPDAPS-----YLLNLIDTPGHVDFSYEVSRSLAA 157
Query: 439 TDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNKMDR 561
GAL QT A + I +NK+D+
Sbjct: 158 CQGALLVVDAAQGVQAQTIANFYLAFESNLSIIPVINKIDQ 198
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2
Query: 119 IRNMSVIAHVDHGKSTLTDSLV 184
+RN S+IAHVDHGKSTL D L+
Sbjct: 57 VRNFSIIAHVDHGKSTLADRLL 78
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 45.2 bits (102), Expect = 5e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 373 INLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNK 552
IN+ID+ GH DF EV L + +G L QT VL++A+ ++ +NK
Sbjct: 184 INIIDTPGHSDFGGEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNK 243
Query: 553 MDR 561
+DR
Sbjct: 244 IDR 246
Score = 41.9 bits (94), Expect = 4e-04
Identities = 14/25 (56%), Positives = 24/25 (96%)
Frame = +2
Query: 110 KRNIRNMSVIAHVDHGKSTLTDSLV 184
+R++RN++++AHVDHGK+TL DS++
Sbjct: 116 RRDVRNIAIVAHVDHGKTTLVDSML 140
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +1
Query: 355 SEXXFLINLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKP 534
++ + +NLID+ GHVDFS EV+ +L +GAL QT + A+ ++
Sbjct: 139 NDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENDLEI 198
Query: 535 ILFMNKMD 558
I +NK+D
Sbjct: 199 IPVLNKID 206
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +2
Query: 116 NIRNMSVIAHVDHGKSTLTDSLV 184
NIRN S+IAH+DHGKSTL D L+
Sbjct: 76 NIRNFSIIAHIDHGKSTLADKLL 98
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 247 GRTXRCITIKSTAISM-FFELEEKXLVFITNPDQREKSEXXFLINLIDSXGHVDFSSEVT 423
GR + + ++M + E E++ + IT+P IN+ID+ GHVDF+ EV
Sbjct: 129 GRNYKIGEFQEGTVTMDWMEQEQERGITITSPPTTAFWNKH-RINIIDTPGHVDFTLEVE 187
Query: 424 AALRVTDGAL 453
ALRV DGA+
Sbjct: 188 RALRVLDGAI 197
>02_04_0462 + 23131433-23132836
Length = 467
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 92 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSL 181
RG ++ + N+ I HVDHGK+TLT +L
Sbjct: 61 RGKFERTKPHVNIGTIGHVDHGKTTLTAAL 90
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 101 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 190
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 30
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 101 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 190
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 30
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 101 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 190
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 30
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 101 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 190
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 30
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 125 NMSVIAHVDHGKSTLTDSL 181
N+ I HVDHGK+TLT ++
Sbjct: 69 NVGTIGHVDHGKTTLTAAI 87
>08_02_0059 - 11778739-11780998,11781744-11781751
Length = 755
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -2
Query: 237 SVKRVSPAXAPAM-IPALETNESVRVDLP*STWAITDMLRIFRFLSIIPRISSTVK 73
S++R+ P+ + ++ +S+ +LP S W IT + +F I+PR + +K
Sbjct: 470 SLRRIHPSIGNLKNLQTIDVRQSLVHELPCSFWKITSLRHVFGSELIVPRWTRELK 525
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 29.1 bits (62), Expect = 3.3
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 128 MSVIAHVDHGKSTLTDSL 181
++++ HVDHGK++L DSL
Sbjct: 200 VTIMGHVDHGKTSLLDSL 217
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = +1
Query: 373 INLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNK 552
I +D+ GH FS+ VTD + QT + A A + ++ +NK
Sbjct: 247 ITFLDTPGHAAFSAMRARGAAVTDIVVLVVAADDGVMPQTLEAMSHAKAANVPIVVAVNK 306
Query: 553 MDR 561
D+
Sbjct: 307 CDK 309
>05_04_0199 + 18980017-18980759,18981478-18981532
Length = 265
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 91 PWDDGQEAEYPQHVCDRPRRSRQVNPHGLVGFQGRYHCWC 210
PW GQ P + C R R P+G R C C
Sbjct: 190 PWKGGQGGNNPDYECLRAELRRMAPPNGRAVLLFRNRCGC 229
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 125 NMSVIAHVDHGKSTLTDSLV 184
N++++ HVD GKSTL+ L+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLL 268
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 28.3 bits (60), Expect = 5.7
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 125 NMSVIAHVDHGKSTLTDSLV 184
N++++ HVD GKSTL+ L+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLL 268
>01_06_1466 +
37559600-37559795,37560597-37560730,37561252-37561437,
37562538-37562753,37563008-37563119,37563493-37563663,
37564621-37564684,37565555-37565685,37566263-37566393,
37566843-37566945,37567322-37567398,37567813-37567860,
37568162-37568311,37568810-37569010
Length = 639
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 190 LGNQRVREG*LAVIDVGDHRHV-ADIPLLVHHPTDLVYREIHHFRWF 53
+GN+ +G A +D HRH+ A++PL PTD+ ++ F+WF
Sbjct: 585 IGNE---DGVAAAVD-SFHRHLPAELPL-APPPTDVKEEQLDFFQWF 626
>01_01_0699 +
5405178-5405356,5405478-5405693,5405808-5405919,
5406335-5406397,5406468-5406606,5406822-5406877,
5408088-5408161,5408270-5408417,5408505-5408678,
5408809-5408896,5408996-5409109,5409728-5409825,
5409927-5410017,5410440-5410534,5410672-5410825,
5410864-5410876,5411276-5411384
Length = 640
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +3
Query: 138 SPTSITASQPSRTRWFPRPVSLLVRXPERPVSLTR 242
SP A+ P R W PRP S P P+SL R
Sbjct: 18 SPLPFAAAHPCRASWTPRPTS-----PLPPLSLLR 47
>09_04_0743 - 19862847-19864745,19865875-19866912
Length = 978
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -3
Query: 164 LTCRDRRGRSQTCCGYSASCPSSHGS 87
+ CR RRG S+ CC S+SC + H S
Sbjct: 691 VVCRCRRGFSE-CCESSSSCFAGHFS 715
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 128 MSVIAHVDHGKSTLTD 175
++++ HVDHGK+TL D
Sbjct: 430 VTIMGHVDHGKTTLLD 445
>04_04_0577 +
26349205-26349669,26350384-26350482,26350887-26351064,
26351900-26352087,26352335-26352373
Length = 322
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +3
Query: 165 PSRTRWFPRPVSLLVRXPERPVSLTRVRTXXP 260
P+RTR RP LLV +RP S T + P
Sbjct: 36 PTRTRPLRRPTPLLVARAKRPGSRTAAASRQP 67
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,846,036
Number of Sequences: 37544
Number of extensions: 269556
Number of successful extensions: 686
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1644004708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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