Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060320.seq
(658 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 130 1e-30
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 71 5e-13
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 60 1e-09
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 60 1e-09
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 60 1e-09
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 57 1e-08
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 53 1e-07
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 53 1e-07
At5g13650.2 68418.m01585 elongation factor family protein contai... 47 1e-05
At5g13650.1 68418.m01584 elongation factor family protein contai... 46 2e-05
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 45 4e-05
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 45 5e-05
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 41 8e-04
At2g31060.1 68415.m03790 elongation factor family protein contai... 31 0.51
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 30 1.2
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 30 1.2
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 30 1.2
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 30 1.2
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 30 1.2
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 30 1.6
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 29 3.6
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 28 4.8
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 28 4.8
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 28 6.3
At4g05632.1 68417.m00875 hypothetical protein 27 8.3
At3g09040.1 68416.m01063 pentatricopeptide (PPR) repeat-containi... 27 8.3
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 130 bits (313), Expect = 1e-30
Identities = 69/133 (51%), Positives = 88/133 (66%)
Frame = +1
Query: 259 RCITIKSTAISMFFELEEKXLVFITNPDQREKSEXXFLINLIDSXGHVDFSSEVTAALRV 438
R ITIKST IS+++E+ ++ L T R+ +E +LINLIDS GHVDFSSEVTAALR+
Sbjct: 66 RGITIKSTGISLYYEMTDESLKSFTGA--RDGNE--YLINLIDSPGHVDFSSEVTAALRI 121
Query: 439 TDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNKMDRXXXXXXXXXXXXYQTXQRI 618
TDGAL QTETVLR+A+ RI+P+L +NKMDR YQT R+
Sbjct: 122 TDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDRCFLELQVDGEEAYQTFSRV 181
Query: 619 VENVNVLIATYND 657
+EN NV++ATY D
Sbjct: 182 IENANVIMATYED 194
Score = 71.3 bits (167), Expect = 5e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +2
Query: 65 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 187
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVA 41
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 71.3 bits (167), Expect = 5e-13
Identities = 37/95 (38%), Positives = 51/95 (53%)
Frame = +1
Query: 367 FLINLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFM 546
+ +NLIDS GH+DF SEV+ A R++DGAL QT VLR+A ++ P L +
Sbjct: 74 YSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQAWIEKLTPCLVL 133
Query: 547 NKMDRXXXXXXXXXXXXYQTXQRIVENVNVLIATY 651
NK+DR Y RIV VN +++ Y
Sbjct: 134 NKIDRLIFELRLSPMEAYTRLIRIVHEVNGIVSAY 168
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +2
Query: 113 RNIRNMSVIAHVDHGKSTLTDSLVS 187
R +RN+ ++AHVDHGK+TL D L++
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIA 31
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/98 (32%), Positives = 50/98 (51%)
Frame = +1
Query: 340 DQREKSEXXFLINLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIA 519
D R KS +L N++D+ GHV+FS E+TA+LR+ DGA+ TE +R AI
Sbjct: 203 DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQ 259
Query: 520 XRIKPILFMNKMDRXXXXXXXXXXXXYQTXQRIVENVN 633
+ ++ +NK+DR Y + +E +N
Sbjct: 260 DHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVIN 297
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 95 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 190
G+M +RN++++ H+ HGK+ D LV +
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQ 161
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/98 (32%), Positives = 50/98 (51%)
Frame = +1
Query: 340 DQREKSEXXFLINLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIA 519
D R KS +L N++D+ GHV+FS E+TA+LR+ DGA+ TE +R AI
Sbjct: 203 DSRSKS---YLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQ 259
Query: 520 XRIKPILFMNKMDRXXXXXXXXXXXXYQTXQRIVENVN 633
+ ++ +NK+DR Y + +E +N
Sbjct: 260 DHLPIVVVINKVDRLITELKLPPRDAYYKLRHTIEVIN 297
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 95 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 190
G+M +RN++++ H+ HGK+ D LV +
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQ 161
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 60.1 bits (139), Expect = 1e-09
Identities = 31/63 (49%), Positives = 39/63 (61%)
Frame = +1
Query: 373 INLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNK 552
IN+ID+ GHVDF+ EV ALRV DGA+ Q+ETV R+A + I F+NK
Sbjct: 163 INIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNK 222
Query: 553 MDR 561
MDR
Sbjct: 223 MDR 225
Score = 29.1 bits (62), Expect = 2.7
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = +2
Query: 113 RNIRNMSVIAHVDHGKSTLTDSLV 184
++ RN+ ++AH+D GK+T T+ ++
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERIL 117
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 56.8 bits (131), Expect = 1e-08
Identities = 31/98 (31%), Positives = 50/98 (51%)
Frame = +1
Query: 340 DQREKSEXXFLINLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIA 519
D R KS +L N++D+ G+V+FS E+TA+LR+ DGA+ TE +R AI
Sbjct: 189 DSRSKS---YLCNIMDTPGNVNFSDEMTASLRLADGAVFIVDAAQGVMVNTERAIRHAIQ 245
Query: 520 XRIKPILFMNKMDRXXXXXXXXXXXXYQTXQRIVENVN 633
+ ++ +NK+DR Y + +E +N
Sbjct: 246 DHLPIVVVINKVDRLITELKLPPRDAYYKLRYTIEVIN 283
Score = 32.3 bits (70), Expect = 0.29
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2
Query: 95 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 190
G+M +RN++++ H+ HGK+ D LV +
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQ 147
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +1
Query: 367 FLINLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFM 546
+ +N+ID+ GHVDF+ EV ALRV DGA+ Q+ TV R+ + + F+
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFI 192
Query: 547 NKMDR 561
NK+DR
Sbjct: 193 NKLDR 197
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 101 MDKKRNIRNMSVIAHVDHGKSTLTDSLV 184
MDK +RN+ + AH+D GK+TLT+ ++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVL 86
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/65 (40%), Positives = 38/65 (58%)
Frame = +1
Query: 367 FLINLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFM 546
+ +N+ID+ GHVDF+ EV ALRV DGA+ Q+ TV R+ + + F+
Sbjct: 133 YKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRVAFI 192
Query: 547 NKMDR 561
NK+DR
Sbjct: 193 NKLDR 197
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +2
Query: 101 MDKKRNIRNMSVIAHVDHGKSTLTDSLV 184
MDK +RN+ + AH+D GK+TLT+ ++
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVL 86
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 47.2 bits (107), Expect = 1e-05
Identities = 18/43 (41%), Positives = 32/43 (74%)
Frame = +2
Query: 56 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLV 184
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSML 104
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 373 INLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNK 552
+N+ID+ GH DF EV L + DG L QT VL++A+ ++ +NK
Sbjct: 148 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNK 207
Query: 553 MDR 561
+DR
Sbjct: 208 IDR 210
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +1
Query: 373 INLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNK 552
+N+ID+ GH DF EV L + DG L QT VL++A+ ++ +NK
Sbjct: 147 VNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNK 206
Query: 553 MDR 561
+DR
Sbjct: 207 IDR 209
Score = 45.2 bits (102), Expect = 4e-05
Identities = 15/28 (53%), Positives = 26/28 (92%)
Frame = +2
Query: 101 MDKKRNIRNMSVIAHVDHGKSTLTDSLV 184
+D++ N+RN++++AHVDHGK+TL DS++
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSML 103
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 45.2 bits (102), Expect = 4e-05
Identities = 32/101 (31%), Positives = 48/101 (47%)
Frame = +1
Query: 259 RCITIKSTAISMFFELEEKXLVFITNPDQREKSEXXFLINLIDSXGHVDFSSEVTAALRV 438
R IT+K+ +MF+E + +E S +L+NLID+ GHVDFS EV+ +L
Sbjct: 110 RGITVKAQTATMFYE---------NKVEDQEAS--GYLLNLIDTPGHVDFSYEVSRSLSA 158
Query: 439 TDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNKMDR 561
GAL QT A + + +NK+D+
Sbjct: 159 CQGALLVVDAAQGVQAQTVANFYLAFEANLTIVPVINKIDQ 199
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2
Query: 119 IRNMSVIAHVDHGKSTLTDSLV 184
IRN S+IAH+DHGKSTL D L+
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLM 87
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +1
Query: 367 FLINLIDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFM 546
F +NLID+ GHVDFS EV+ +L +GAL QT + A+ ++ I +
Sbjct: 152 FCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVL 211
Query: 547 NKMD 558
NK+D
Sbjct: 212 NKID 215
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +2
Query: 116 NIRNMSVIAHVDHGKSTLTDSLV 184
NIRN S+IAH+DHGKSTL D L+
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLL 107
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 71 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSL 181
+FTV RG ++K+ N+ I HVDHGK+TLT +L
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAAL 99
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 31.5 bits (68), Expect = 0.51
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +1
Query: 436 VTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNKMDR 561
+ +GA+ QT+ VL +A+ ++PIL +NK+DR
Sbjct: 1 MVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPILLLNKVDR 42
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 101 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 190
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYK 30
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 382 IDSXGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRRAIAXRIKPILFMNKMDR 561
+D+ GH F + RVTD A+ QT + A A + ++ +NK+D+
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDGIRPQTNEAIAHAKAAAVPIVIAINKIDK 616
Score = 27.5 bits (58), Expect = 8.3
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 128 MSVIAHVDHGKSTLTD 175
++++ HVDHGK+TL D
Sbjct: 504 ITIMGHVDHGKTTLLD 519
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 101 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 190
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYK 30
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 101 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 190
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYK 30
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 101 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 190
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYK 30
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 125 NMSVIAHVDHGKSTLTDSL 181
N+ I HVDHGK+TLT ++
Sbjct: 69 NVGTIGHVDHGKTTLTAAI 87
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 138 SPTSITASQPSRTRWFPRPVSLLV 209
SP+S T+++P R RW P+P +L+
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILI 31
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 125 NMSVIAHVDHGKSTLTDSLV 184
N++++ HVD GKSTL+ L+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLL 260
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 128 MSVIAHVDHGKSTLTDSL 181
++V+ HVDHGK++L D+L
Sbjct: 222 VTVMGHVDHGKTSLLDAL 239
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 138 SPTSITASQPSRTRWFPRPVSLLV 209
S + T+++P R+RW P+P +L+
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILI 43
>At4g05632.1 68417.m00875 hypothetical protein
Length = 197
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 228 VSLTRVRTXXPLHHH*IYGHLYVLR-A*REXFSIHHK 335
VSL+R + L HH +Y HL LR + E SIH +
Sbjct: 62 VSLSRTKQGSALEHHKLYMHLTKLRQSVLEASSIHDR 98
>At3g09040.1 68416.m01063 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 1028
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = -3
Query: 383 IKLIKKXFSLFSRWSGFVMNTKXFSSSSKNIEMAVDLM--VMQRXVRP 246
IK +K FS WS MN S N+E AV L ++ R V P
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTRGVNP 627
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,059,755
Number of Sequences: 28952
Number of extensions: 219615
Number of successful extensions: 519
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1373722560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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