Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060318.seq
(639 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1HQB9 Cluster: Nucleosome assembly protein isoform 1; ... 155 1e-36
UniRef50_P55209 Cluster: Nucleosome assembly protein 1-like 1; n... 52 2e-05
UniRef50_Q4R6R2 Cluster: Testis cDNA, clone: QtsA-17351, similar... 45 0.001
UniRef50_UPI00006A2268 Cluster: Nucleosome assembly protein 1-li... 43 0.005
UniRef50_Q9U602 Cluster: Putative nucleosome binding protein; n=... 42 0.017
UniRef50_Q9W1G7 Cluster: CG5330-PA; n=4; Sophophora|Rep: CG5330-... 39 0.088
UniRef50_Q4WTN7 Cluster: Nucleosome assembly protein Nap1, putat... 37 0.36
UniRef50_Q9U1L4 Cluster: EG:BACR7A4.18 protein; n=2; Sophophora|... 36 0.62
UniRef50_UPI0000F34542 Cluster: Nucleosome assembly protein 1-li... 36 1.1
UniRef50_Q16HP8 Cluster: Nucleosome assembly protein; n=2; Aedes... 35 1.4
UniRef50_Q794H2 Cluster: Nucleosome assembly protein 1-like 3; n... 35 1.4
UniRef50_A6GA25 Cluster: Putative uncharacterized protein; n=1; ... 35 1.9
UniRef50_Q99457 Cluster: Nucleosome assembly protein 1-like 3; n... 34 2.5
UniRef50_UPI0000EB4B18 Cluster: nucleosome assembly protein 1-li... 34 3.3
UniRef50_O59797 Cluster: Putative nucleosome assembly protein C3... 34 3.3
UniRef50_Q9ULW6 Cluster: Nucleosome assembly protein 1-like 2; n... 33 4.4
UniRef50_A6DC54 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
UniRef50_Q1HR22 Cluster: Nucleosome assembly protein NAP-17; n=2... 33 7.7
>UniRef50_Q1HQB9 Cluster: Nucleosome assembly protein isoform 1;
n=7; Coelomata|Rep: Nucleosome assembly protein isoform
1 - Bombyx mori (Silk moth)
Length = 395
Score = 155 bits (375), Expect = 1e-36
Identities = 82/135 (60%), Positives = 89/135 (65%), Gaps = 1/135 (0%)
Frame = +2
Query: 236 LENSSEEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDT 415
L +EFVDIEAKFYSEVHA RALIVNGTYEPNDDECLNPWRDDT
Sbjct: 70 LRTLQKEFVDIEAKFYSEVHALECKYEKLYKPLYEKRALIVNGTYEPNDDECLNPWRDDT 129
Query: 416 EEEELARAVQNAAITEGXEKKDDKAIXPPMDPM*R-VSQTFGTTYSGMSQCSAK*CKXLM 592
EEEELARAVQNAAITEG EKKDDKAI PPMDP + + + + +S S +
Sbjct: 130 EEEELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWYNIFRNVSMLSEMMQEHDE 189
Query: 593 NXSKMLQDIKVPMHE 637
K LQDIKV MHE
Sbjct: 190 PILKCLQDIKVQMHE 204
Score = 115 bits (276), Expect = 1e-24
Identities = 59/84 (70%), Positives = 60/84 (71%)
Frame = +3
Query: 30 MGTVERXGDDHTXXXXXXXXXXXXXXXXLAQHLLKSGVTRNEMIAAITNRLHAEAMASLP 209
MGTVER GDDHT LAQHLLKSGVTRNEMIAAITNRLHAEAMASLP
Sbjct: 1 MGTVERSGDDHTSEMESAEEEEVVGSGELAQHLLKSGVTRNEMIAAITNRLHAEAMASLP 60
Query: 210 PNVRRRIRALRTLQKSLSTLRPSF 281
PNVRRRIRALRTLQK + F
Sbjct: 61 PNVRRRIRALRTLQKEFVDIEAKF 84
>UniRef50_P55209 Cluster: Nucleosome assembly protein 1-like 1;
n=90; Eumetazoa|Rep: Nucleosome assembly protein 1-like
1 - Homo sapiens (Human)
Length = 391
Score = 51.6 bits (118), Expect = 2e-05
Identities = 31/88 (35%), Positives = 44/88 (50%)
Frame = +2
Query: 236 LENSSEEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDT 415
L+N + IEAKFY EVH R I+N YEP ++EC W+ D
Sbjct: 81 LKNLQVKCAQIEAKFYEEVHDLERKYAVLYQPLFDKRFEIINAIYEPTEEEC--EWKPD- 137
Query: 416 EEEELARAVQNAAITEGXEKKDDKAIXP 499
EE+E++ ++ A E EKKD++ P
Sbjct: 138 EEDEISEELKEKAKIE-DEKKDEEKEDP 164
Score = 40.7 bits (91), Expect = 0.029
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +1
Query: 517 KGIPDFWYHIFRDVXMLSEMMQXTDEP 597
KGIP+FW +F++V +LS+M+Q DEP
Sbjct: 165 KGIPEFWLTVFKNVDLLSDMVQEHDEP 191
>UniRef50_Q4R6R2 Cluster: Testis cDNA, clone: QtsA-17351, similar to
human nucleosome assembly protein 1-like 4 (NAP1L4),;
n=5; Euteleostomi|Rep: Testis cDNA, clone: QtsA-17351,
similar to human nucleosome assembly protein 1-like 4
(NAP1L4), - Macaca fascicularis (Crab eating macaque)
(Cynomolgus monkey)
Length = 217
Score = 45.2 bits (102), Expect = 0.001
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +1
Query: 517 KGIPDFWYHIFRDVXMLSEMMQXTDEP 597
KGIP+FW+ IFR+V MLSE++Q DEP
Sbjct: 157 KGIPEFWFTIFRNVDMLSELVQEYDEP 183
Score = 37.9 bits (84), Expect = 0.20
Identities = 26/68 (38%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +2
Query: 266 IEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDTEEEE-LARAV 442
IEAKFY EVH R + G EP D E + W + EEEE LA +
Sbjct: 80 IEAKFYEEVHDLERKYAALYQPLFDKRREFITGDVEPTDAE--SEWHSENEEEEKLAGDM 137
Query: 443 QN-AAITE 463
+N ITE
Sbjct: 138 KNKVVITE 145
>UniRef50_UPI00006A2268 Cluster: Nucleosome assembly protein 1-like
4 (Nucleosome assembly protein 2) (NAP2).; n=3;
Tetrapoda|Rep: Nucleosome assembly protein 1-like 4
(Nucleosome assembly protein 2) (NAP2). - Xenopus
tropicalis
Length = 374
Score = 43.2 bits (97), Expect = 0.005
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +1
Query: 496 ASNGSXVKGIPDFWYHIFRDVXMLSEMMQXTDEP 597
AS+ KGIPDFW IFR+V M+S ++Q DEP
Sbjct: 136 ASDVDKCKGIPDFWLTIFRNVDMISILLQEYDEP 169
>UniRef50_Q9U602 Cluster: Putative nucleosome binding protein; n=1;
Anisakis simplex|Rep: Putative nucleosome binding
protein - Anisakis simplex (Herring worm)
Length = 321
Score = 41.5 bits (93), Expect = 0.017
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +2
Query: 254 EFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDTEEEELA 433
E + +EAKFY+ VH R IV G +EP D+EC P + EEE+
Sbjct: 36 EGIHVEAKFYARVHQLEKEFAPMFDALHEKRKEIVTGEHEPTDEECNYPIINGLTEEEVK 95
Query: 434 RAVQNAA 454
+ + +A
Sbjct: 96 KMDEASA 102
Score = 38.3 bits (85), Expect = 0.15
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +1
Query: 517 KGIPDFWYHIFRDVXMLSEMMQXTDEP 597
KG+PDFW ++ + V L+EM+Q DEP
Sbjct: 110 KGVPDFWLNLLKSVDHLAEMIQEHDEP 136
>UniRef50_Q9W1G7 Cluster: CG5330-PA; n=4; Sophophora|Rep: CG5330-PA
- Drosophila melanogaster (Fruit fly)
Length = 370
Score = 39.1 bits (87), Expect = 0.088
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 517 KGIPDFWYHIFRDVXMLSEMMQXTDEP 597
KGIP FW +FR+ ++SEM+Q DEP
Sbjct: 144 KGIPGFWLTVFRNTAIMSEMVQPHDEP 170
>UniRef50_Q4WTN7 Cluster: Nucleosome assembly protein Nap1,
putative; n=19; Dikarya|Rep: Nucleosome assembly protein
Nap1, putative - Aspergillus fumigatus (Sartorya
fumigata)
Length = 423
Score = 37.1 bits (82), Expect = 0.36
Identities = 22/65 (33%), Positives = 31/65 (47%)
Frame = +2
Query: 236 LENSSEEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDT 415
L+ +E +EA+F EV RA IVNG EP DDE + +++
Sbjct: 93 LKGIQKEHAKLEAQFQEEVLELEKKYFAKFTPLYQRRATIVNGAAEPTDDE-VQAGKEEE 151
Query: 416 EEEEL 430
EEEE+
Sbjct: 152 EEEEV 156
>UniRef50_Q9U1L4 Cluster: EG:BACR7A4.18 protein; n=2;
Sophophora|Rep: EG:BACR7A4.18 protein - Drosophila
melanogaster (Fruit fly)
Length = 375
Score = 36.3 bits (80), Expect = 0.62
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 520 GIPDFWYHIFRDVXMLSEMMQXTDEP 597
G+P FW +F++V +LSE++Q DEP
Sbjct: 177 GVPRFWLTVFQNVPLLSELVQDHDEP 202
>UniRef50_UPI0000F34542 Cluster: Nucleosome assembly protein 1-like
3.; n=2; Eutheria|Rep: Nucleosome assembly protein
1-like 3. - Bos Taurus
Length = 331
Score = 35.5 bits (78), Expect = 1.1
Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 1/84 (1%)
Frame = +2
Query: 236 LENSSEEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWR-DD 412
L N +E ++A F +H R I+N YEP ++EC W +D
Sbjct: 66 LRNIQDECDKVDALFLEAIHDLERKYAELNRPLYNRRFQIINAEYEPTEEEC--EWNLED 123
Query: 413 TEEEELARAVQNAAITEGXEKKDD 484
E + +A A+ E K+D
Sbjct: 124 EEAKTEEKAESKDALEASPEVKED 147
>UniRef50_Q16HP8 Cluster: Nucleosome assembly protein; n=2; Aedes
aegypti|Rep: Nucleosome assembly protein - Aedes aegypti
(Yellowfever mosquito)
Length = 325
Score = 35.1 bits (77), Expect = 1.4
Identities = 20/73 (27%), Positives = 30/73 (41%)
Frame = +2
Query: 209 PKCSSANPRLENSSEEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDE 388
P ++ L E + EA+F+ VH+ R IV+G+YEP +
Sbjct: 62 PSINTKIQALNKIQHELLSKEAEFHKHVHSMEMEFQKTLGALYEKRKQIVSGSYEPIRKD 121
Query: 389 CLNPWRDDTEEEE 427
LNP +T E
Sbjct: 122 LLNPEEYETSPSE 134
Score = 32.7 bits (71), Expect = 7.7
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 517 KGIPDFWYHIFRDVXMLSEMMQXTDEP 597
KGIPDFW +F +L M+ DEP
Sbjct: 138 KGIPDFWLTVFTKAPLLQCMIWEADEP 164
>UniRef50_Q794H2 Cluster: Nucleosome assembly protein 1-like 3; n=3;
Murinae|Rep: Nucleosome assembly protein 1-like 3 - Mus
musculus (Mouse)
Length = 544
Score = 35.1 bits (77), Expect = 1.4
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 517 KGIPDFWYHIFRDVXMLSEMMQXTDEP 597
KGIPD+W + ++V L M+Q DEP
Sbjct: 347 KGIPDYWLTVLKNVDKLGPMIQKCDEP 373
>UniRef50_A6GA25 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 447
Score = 34.7 bits (76), Expect = 1.9
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 114 LAQHLLKSGVTRNEMIAAITNRLHAEAMASLPPNVRRRIRALR 242
LA LL+ + R ++A + +LH E LPP +RRR+ LR
Sbjct: 74 LAAQLLEDSLGRERLMAGLRGQLHVEP-DQLPPTMRRRVDVLR 115
>UniRef50_Q99457 Cluster: Nucleosome assembly protein 1-like 3;
n=10; Eutheria|Rep: Nucleosome assembly protein 1-like 3
- Homo sapiens (Human)
Length = 506
Score = 34.3 bits (75), Expect = 2.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +1
Query: 517 KGIPDFWYHIFRDVXMLSEMMQXTDEP 597
KGIPD+W + ++V L M+Q DEP
Sbjct: 309 KGIPDYWLIVLKNVDKLGPMIQKYDEP 335
Score = 33.9 bits (74), Expect = 3.3
Identities = 21/92 (22%), Positives = 35/92 (38%)
Frame = +2
Query: 236 LENSSEEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDT 415
L N +E ++ F +H R I+N YEP ++EC W +
Sbjct: 111 LRNIQDECDKVDTLFLKAIHDLERKYAELNKPLYDRRFQIINAEYEPTEEEC--EWNSED 168
Query: 416 EEEELARAVQNAAITEGXEKKDDKAIXPPMDP 511
EE VQ+ +E + ++ P +P
Sbjct: 169 EEFSSDEEVQDNTPSEMPPLEGEEEENPKENP 200
>UniRef50_UPI0000EB4B18 Cluster: nucleosome assembly protein 1-like
6 (NAP1L6), misc RNA; n=3; Canis lupus familiaris|Rep:
nucleosome assembly protein 1-like 6 (NAP1L6), misc RNA
- Canis familiaris
Length = 303
Score = 33.9 bits (74), Expect = 3.3
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 236 LENSSEEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDEC 391
L+N ++ +EA+FY + H R+ I+N +EP + EC
Sbjct: 17 LKNLQAQYAQVEAQFYRDFHDLEKKYAAFYQPLFDKRSEIINAIHEPTEGEC 68
>UniRef50_O59797 Cluster: Putative nucleosome assembly protein
C364.06; n=1; Schizosaccharomyces pombe|Rep: Putative
nucleosome assembly protein C364.06 -
Schizosaccharomyces pombe (Fission yeast)
Length = 393
Score = 33.9 bits (74), Expect = 3.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 505 GSXVKGIPDFWYHIFRDVXMLSEMMQXTDE 594
G KGIP+FW ++V LSEM+ DE
Sbjct: 158 GDDTKGIPEFWLTAMKNVLSLSEMITPEDE 187
>UniRef50_Q9ULW6 Cluster: Nucleosome assembly protein 1-like 2;
n=15; Eutheria|Rep: Nucleosome assembly protein 1-like 2
- Homo sapiens (Human)
Length = 460
Score = 33.5 bits (73), Expect = 4.4
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 517 KGIPDFWYHIFRDVXMLSEMMQXTDEP 597
KGIPDFW + ++V L+ +++ DEP
Sbjct: 238 KGIPDFWLTVLKNVDTLTPLIKKYDEP 264
>UniRef50_A6DC54 Cluster: Putative uncharacterized protein; n=1;
Caminibacter mediatlanticus TB-2|Rep: Putative
uncharacterized protein - Caminibacter mediatlanticus
TB-2
Length = 241
Score = 32.7 bits (71), Expect = 7.7
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -3
Query: 424 FFFSVITPWVETFIIIRFICAIHNKSSFFIKR--LVKFFIFAFECMYFTVKLGLNVDKL 254
F S+I V F+I+ I ++++ SFFI V FFIF+ +F KL + +++L
Sbjct: 12 FLISIIIG-VSLFLILNNIFYLNDELSFFISSSIFVLFFIFSSFLSFFVFKLKIKIEEL 69
>UniRef50_Q1HR22 Cluster: Nucleosome assembly protein NAP-17; n=2;
Culicidae|Rep: Nucleosome assembly protein NAP-17 -
Aedes aegypti (Yellowfever mosquito)
Length = 395
Score = 32.7 bits (71), Expect = 7.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +1
Query: 517 KGIPDFWYHIFRDVXMLSEMMQXTDEP 597
+GIP FW +F++ +++M+Q DEP
Sbjct: 149 QGIPAFWLTVFKNTQTMADMIQPHDEP 175
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 554,327,012
Number of Sequences: 1657284
Number of extensions: 9833023
Number of successful extensions: 25830
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 25139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25814
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -