Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060318.seq
         (639 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.1  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    23   2.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.6  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   6.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   6.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.6  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 176 SPSCRSDGIPTPKCSSANPRLENSS 250
           SPS     +PT + S++NP   + S
Sbjct: 76  SPSSTPSSLPTQRTSTSNPTYSSRS 100


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +3

Query: 204 LPPNVRRRIRALRTLQKSLSTLRPSFTVKYMH 299
           +P   +R++  L    + + +LRP  T KY H
Sbjct: 265 IPEAEKRKLIHLLQEYRCIFSLRPGLTHKYTH 296


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 270 RPSFTVKYMHSNAN 311
           +P FT KY H N N
Sbjct: 57  QPGFTGKYCHENIN 70


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = -2

Query: 332  EACKVFHICIRVHVL 288
            E+C  F++C+  H++
Sbjct: 1216 ESCSSFYVCVNGHLV 1230


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 355 NKSSFFIKRLVKFFIFAFECMYFTVKLGLNVDK 257
           N SSF +  ++   I  +  + FT+ LG++  K
Sbjct: 99  NNSSFVVANVLFQLIHVYYTVVFTLLLGVDFVK 131


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 355 NKSSFFIKRLVKFFIFAFECMYFTVKLGLNVDK 257
           N SSF +  ++   I  +  + FT+ LG++  K
Sbjct: 99  NNSSFVVANVLFQLIHVYYTVVFTLLLGVDFVK 131


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 355 NKSSFFIKRLVKFFIFAFECMYFTVKLGLNVDK 257
           N SSF +  ++   I  +  + FT+ LG++  K
Sbjct: 419 NNSSFVVANVLFQLIHVYYTVVFTLLLGVDFVK 451


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,121
Number of Sequences: 336
Number of extensions: 2635
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)