Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060318.seq
(639 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome ass... 39 0.005
BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p pro... 39 0.005
AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA... 39 0.005
AY058402-1|AAL13631.1| 375|Drosophila melanogaster GH17085p pro... 36 0.035
AL109630-5|CAB65874.1| 375|Drosophila melanogaster EG:BACR7A4.1... 36 0.035
AE014298-125|AAF45565.2| 375|Drosophila melanogaster CG3708-PA ... 36 0.035
AF172941-1|AAD56359.1| 1084|Drosophila melanogaster anon-15Ab pr... 31 1.3
AE014298-2443|AAF48640.1| 1084|Drosophila melanogaster CG15865-P... 31 1.3
AE014298-3208|ABI31001.1| 335|Drosophila melanogaster CG41476-P... 29 4.0
AY121626-1|AAM51953.1| 605|Drosophila melanogaster GH20068p pro... 29 5.3
AE013599-2758|AAF57644.2| 605|Drosophila melanogaster CG33147-P... 29 5.3
AE014298-764|AAF46054.1| 623|Drosophila melanogaster CG15776-PA... 28 9.3
>U39553-1|AAB07898.1| 370|Drosophila melanogaster nucleosome
assembly protein NAP-1 protein.
Length = 370
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 517 KGIPDFWYHIFRDVXMLSEMMQXTDEP 597
KGIP FW +FR+ ++SEM+Q DEP
Sbjct: 144 KGIPGFWLTVFRNTAIMSEMVQPHDEP 170
>BT001479-1|AAN71234.1| 370|Drosophila melanogaster LD21576p
protein.
Length = 370
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 517 KGIPDFWYHIFRDVXMLSEMMQXTDEP 597
KGIP FW +FR+ ++SEM+Q DEP
Sbjct: 144 KGIPGFWLTVFRNTAIMSEMVQPHDEP 170
>AE013599-3725|AAF47097.1| 370|Drosophila melanogaster CG5330-PA
protein.
Length = 370
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +1
Query: 517 KGIPDFWYHIFRDVXMLSEMMQXTDEP 597
KGIP FW +FR+ ++SEM+Q DEP
Sbjct: 144 KGIPGFWLTVFRNTAIMSEMVQPHDEP 170
>AY058402-1|AAL13631.1| 375|Drosophila melanogaster GH17085p
protein.
Length = 375
Score = 36.3 bits (80), Expect = 0.035
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 520 GIPDFWYHIFRDVXMLSEMMQXTDEP 597
G+P FW +F++V +LSE++Q DEP
Sbjct: 177 GVPRFWLTVFQNVPLLSELVQDHDEP 202
>AL109630-5|CAB65874.1| 375|Drosophila melanogaster EG:BACR7A4.18
protein.
Length = 375
Score = 36.3 bits (80), Expect = 0.035
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 520 GIPDFWYHIFRDVXMLSEMMQXTDEP 597
G+P FW +F++V +LSE++Q DEP
Sbjct: 177 GVPRFWLTVFQNVPLLSELVQDHDEP 202
>AE014298-125|AAF45565.2| 375|Drosophila melanogaster CG3708-PA
protein.
Length = 375
Score = 36.3 bits (80), Expect = 0.035
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +1
Query: 520 GIPDFWYHIFRDVXMLSEMMQXTDEP 597
G+P FW +F++V +LSE++Q DEP
Sbjct: 177 GVPRFWLTVFQNVPLLSELVQDHDEP 202
>AF172941-1|AAD56359.1| 1084|Drosophila melanogaster anon-15Ab
protein.
Length = 1084
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 389 CLNPWRDDTEEEELARAVQNAAITEGXEKKDDKAIXPP 502
CL PW + T++EE + A ++ E E D PP
Sbjct: 369 CLPPWLEQTDDEESSSAASSSDEDEKDEANSDNRKYPP 406
>AE014298-2443|AAF48640.1| 1084|Drosophila melanogaster CG15865-PA
protein.
Length = 1084
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 389 CLNPWRDDTEEEELARAVQNAAITEGXEKKDDKAIXPP 502
CL PW + T++EE + A ++ E E D PP
Sbjct: 369 CLPPWLEQTDDEESSSAASSSDEDEKDEANSDNRKYPP 406
>AE014298-3208|ABI31001.1| 335|Drosophila melanogaster CG41476-PA
protein.
Length = 335
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -3
Query: 529 LGYPLHXIHWRLDSLVILLFLTLSDGSILYR 437
LGYPL + R +V+L L +DGSI +R
Sbjct: 301 LGYPLSHLAGREFRVVVLAILQCADGSIAFR 331
>AY121626-1|AAM51953.1| 605|Drosophila melanogaster GH20068p
protein.
Length = 605
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -1
Query: 303 SSACTSL*NLASMSTNSSEEFSRRGFADEHLGVGMPSLLHEGDL*WPLSFHYGSRHF 133
+++ ++L + +S S+NS FS G A HL V + + L P+ F HF
Sbjct: 179 TASASALASSSSSSSNSGSSFSSAGGASNHLPVFVKPVPSSNQLSHPMVFPSSRVHF 235
>AE013599-2758|AAF57644.2| 605|Drosophila melanogaster CG33147-PA
protein.
Length = 605
Score = 29.1 bits (62), Expect = 5.3
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -1
Query: 303 SSACTSL*NLASMSTNSSEEFSRRGFADEHLGVGMPSLLHEGDL*WPLSFHYGSRHF 133
+++ ++L + +S S+NS FS G A HL V + + L P+ F HF
Sbjct: 179 TASASALASSSSSSSNSGSSFSSAGGASNHLPVFVKPVPSSNQLSHPMVFPSSRVHF 235
>AE014298-764|AAF46054.1| 623|Drosophila melanogaster CG15776-PA
protein.
Length = 623
Score = 28.3 bits (60), Expect = 9.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 395 NPWRDDTEEEELARAVQNAAITEGXEKKDDKAIXPPMDP 511
NP ++ EEE+ + ++ E E+ DDK+ PP P
Sbjct: 187 NPDEEEEEEEQEQASQEDTPKEEDEEEDDDKSTPPPPLP 225
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,393,832
Number of Sequences: 53049
Number of extensions: 480550
Number of successful extensions: 1417
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -