Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060317.seq
         (692 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.         24   4.0  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      24   5.2  

>AF063021-4|AAC16248.1|   93|Anopheles gambiae unknown protein.
          Length = 93

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 558 TQSRTWPRPLAVWWGARSFR 499
           T+ R WPRP    W +R  R
Sbjct: 21  TRGRRWPRPPTSCWPSRRSR 40


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 12/29 (41%), Positives = 14/29 (48%)
 Frame = +1

Query: 328 LGSQLKQTHNIRIVAMDLLDLCNVDHDNP 414
           +G+   Q H   IV  D  DLCN D   P
Sbjct: 134 VGTVSPQLHGKSIVCCDNEDLCNQDLQPP 162


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,200
Number of Sequences: 2352
Number of extensions: 14640
Number of successful extensions: 25
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)