Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060317.seq
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069550-1|AAL39695.1|  535|Drosophila melanogaster LD27564p pro...    63   3e-10
AE014297-4249|AAF56802.2|  535|Drosophila melanogaster CG9986-PA...    63   3e-10
BT025860-1|ABF85760.1|   89|Drosophila melanogaster IP15888p pro...    30   3.4  
BT015225-1|AAT94454.1| 1129|Drosophila melanogaster RE23320p pro...    29   6.0  
BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p pro...    29   6.0  
AE014296-98|AAF47384.1|  941|Drosophila melanogaster CG1233-PA, ...    29   6.0  
AE014296-97|AAG22219.2| 1129|Drosophila melanogaster CG1233-PB, ...    29   6.0  

>AY069550-1|AAL39695.1|  535|Drosophila melanogaster LD27564p
           protein.
          Length = 535

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 32/62 (51%), Positives = 42/62 (67%)
 Frame = +1

Query: 295 RPRLEESFTIHLGSQLKQTHNIRIVAMDLLDLCNVDHDNPTESSRRLQTSLSLYSSELSA 474
           +P +EESFTIHLGSQLK  HNIRI++ ++ +LC+  H    ES   L  +L LYSS L  
Sbjct: 258 QPSMEESFTIHLGSQLKHMHNIRILSANVTELCSPLH--AEESLNGLNMALGLYSSSLCG 315

Query: 475 VI 480
           V+
Sbjct: 316 VV 317



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
 Frame = +2

Query: 11  QTEEMEEKVRLLNTSTTEVEINELATQQFEEQALVSGRWGSQLDALCQTQRTHHRAWLMA 190
           Q +EM+ ++  L+ +TT  +IN L  QQ+  Q  V  R+ S+L+A+   Q+  +R W+ +
Sbjct: 173 QQQEMDSQINQLDITTTSEDINNLLAQQYTTQNYVRKRYESELEAMMGHQKNEYRNWITS 232

Query: 191 TLQEYQTTSALHTP--SNSPLGISRR---------------LHAHPYPRLQPDLVLKKAS 319
            + +    S + TP  + S + +S++                H H   R+    V +  S
Sbjct: 233 QVSQMFQVSPVATPLGNRSSMFVSQQPSMEESFTIHLGSQLKHMHNI-RILSANVTELCS 291

Query: 320 PYTSEVNSNRRTTFALSLWTCSTCAMLIMT 409
           P  +E + N     AL L++ S C ++++T
Sbjct: 292 PLHAEESLN-GLNMALGLYSSSLCGVVVLT 320



 Score = 31.1 bits (67), Expect = 1.5
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 528 LVDAAKSSTEYHFHDVEYQLREISKKVK 611
           ++  A  STE+HF  ++ Q+ +I K++K
Sbjct: 331 IIKNANKSTEFHFEQIDVQMEKIEKQIK 358


>AE014297-4249|AAF56802.2|  535|Drosophila melanogaster CG9986-PA
           protein.
          Length = 535

 Score = 63.3 bits (147), Expect = 3e-10
 Identities = 32/62 (51%), Positives = 42/62 (67%)
 Frame = +1

Query: 295 RPRLEESFTIHLGSQLKQTHNIRIVAMDLLDLCNVDHDNPTESSRRLQTSLSLYSSELSA 474
           +P +EESFTIHLGSQLK  HNIRI++ ++ +LC+  H    ES   L  +L LYSS L  
Sbjct: 258 QPSMEESFTIHLGSQLKHMHNIRILSANVTELCSPLH--AEESLNGLNMALGLYSSSLCG 315

Query: 475 VI 480
           V+
Sbjct: 316 VV 317



 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 39/150 (26%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
 Frame = +2

Query: 11  QTEEMEEKVRLLNTSTTEVEINELATQQFEEQALVSGRWGSQLDALCQTQRTHHRAWLMA 190
           Q +EM+ ++  L+ +TT  +IN L  QQ+  Q  V  R+ S+L+A+   Q+  +R W+ +
Sbjct: 173 QQQEMDSQINQLDITTTSEDINNLLAQQYTTQNYVRKRYESELEAMMGHQKNEYRNWITS 232

Query: 191 TLQEYQTTSALHTP--SNSPLGISRR---------------LHAHPYPRLQPDLVLKKAS 319
            + +    S + TP  + S + +S++                H H   R+    V +  S
Sbjct: 233 QVSQMFQVSPVATPLGNRSSMFVSQQPSMEESFTIHLGSQLKHMHNI-RILSANVTELCS 291

Query: 320 PYTSEVNSNRRTTFALSLWTCSTCAMLIMT 409
           P  +E + N     AL L++ S C ++++T
Sbjct: 292 PLHAEESLN-GLNMALGLYSSSLCGVVVLT 320



 Score = 31.1 bits (67), Expect = 1.5
 Identities = 10/28 (35%), Positives = 19/28 (67%)
 Frame = +3

Query: 528 LVDAAKSSTEYHFHDVEYQLREISKKVK 611
           ++  A  STE+HF  ++ Q+ +I K++K
Sbjct: 331 IIKNANKSTEFHFEQIDVQMEKIEKQIK 358


>BT025860-1|ABF85760.1|   89|Drosophila melanogaster IP15888p
           protein.
          Length = 89

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +2

Query: 35  VRLLNTSTTEVEINELAT-QQFEEQALVSGRWGSQLDALCQ 154
           + +LN S TE E +   T   F+E+    G+W + L A+C+
Sbjct: 14  INILNRSETESESDSETTFPTFKEEQRPRGKWENDLHAMCE 54


>BT015225-1|AAT94454.1| 1129|Drosophila melanogaster RE23320p
           protein.
          Length = 1129

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 263 DGEIYPAESCLVCAKLMWSGTPAMSPLTMLCDVFFAFDT 147
           DG+++ +E+ L     +    P+++PL  +C   F FD+
Sbjct: 425 DGDVFQSETLLTPTCQLPGFEPSLAPLAQMCSEAFPFDS 463


>BT011079-1|AAR82745.1| 1100|Drosophila melanogaster SD01102p
           protein.
          Length = 1100

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 263 DGEIYPAESCLVCAKLMWSGTPAMSPLTMLCDVFFAFDT 147
           DG+++ +E+ L     +    P+++PL  +C   F FD+
Sbjct: 487 DGDVFQSETLLTPTCQLPGFEPSLAPLAQMCSEAFPFDS 525


>AE014296-98|AAF47384.1|  941|Drosophila melanogaster CG1233-PA,
           isoform A protein.
          Length = 941

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 263 DGEIYPAESCLVCAKLMWSGTPAMSPLTMLCDVFFAFDT 147
           DG+++ +E+ L     +    P+++PL  +C   F FD+
Sbjct: 237 DGDVFQSETLLTPTCQLPGFEPSLAPLAQMCSEAFPFDS 275


>AE014296-97|AAG22219.2| 1129|Drosophila melanogaster CG1233-PB,
           isoform B protein.
          Length = 1129

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -1

Query: 263 DGEIYPAESCLVCAKLMWSGTPAMSPLTMLCDVFFAFDT 147
           DG+++ +E+ L     +    P+++PL  +C   F FD+
Sbjct: 425 DGDVFQSETLLTPTCQLPGFEPSLAPLAQMCSEAFPFDS 463


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,880,100
Number of Sequences: 53049
Number of extensions: 639422
Number of successful extensions: 2311
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2311
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)