Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060316.seq
         (463 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8SWW8 Cluster: LD18186p; n=1; Drosophila melanogaster|...    39   0.046
UniRef50_UPI0000F2038A Cluster: PREDICTED: hypothetical protein;...    36   0.32 
UniRef50_Q6TEM9 Cluster: E3 ubiquitin-protein ligase MYLIP; n=13...    36   0.32 
UniRef50_Q5KZ93 Cluster: Transposase; n=7; Bacillaceae|Rep: Tran...    36   0.56 
UniRef50_UPI0000587F1B Cluster: PREDICTED: similar to myosin reg...    35   0.99 
UniRef50_Q17NT7 Cluster: Putative uncharacterized protein; n=1; ...    35   0.99 
UniRef50_Q8WY64 Cluster: E3 ubiquitin-protein ligase MYLIP; n=22...    32   5.3  
UniRef50_Q8IBR4 Cluster: Putative uncharacterized protein PF07_0...    32   7.0  
UniRef50_A5K2I4 Cluster: Putative uncharacterized protein; n=2; ...    31   9.2  

>UniRef50_Q8SWW8 Cluster: LD18186p; n=1; Drosophila
           melanogaster|Rep: LD18186p - Drosophila melanogaster
           (Fruit fly)
          Length = 676

 Score = 39.1 bits (87), Expect = 0.046
 Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
 Frame = +2

Query: 374 MW-LVSQPNSXILEIKVDPNAIGQECLEKVC 463
           MW +V+ PN     +K DP A GQECLEKVC
Sbjct: 1   MWCIVNLPNGTQQAVKWDPKANGQECLEKVC 31


>UniRef50_UPI0000F2038A Cluster: PREDICTED: hypothetical protein;
           n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
           Danio rerio
          Length = 165

 Score = 36.3 bits (80), Expect = 0.32
 Identities = 12/27 (44%), Positives = 22/27 (81%)
 Frame = +2

Query: 383 VSQPNSXILEIKVDPNAIGQECLEKVC 463
           +++P+S +LE++VDP A G++ L K+C
Sbjct: 5   ITRPDSVVLEVEVDPKANGEDILNKIC 31


>UniRef50_Q6TEM9 Cluster: E3 ubiquitin-protein ligase MYLIP; n=13;
           Euteleostomi|Rep: E3 ubiquitin-protein ligase MYLIP -
           Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 472

 Score = 36.3 bits (80), Expect = 0.32
 Identities = 13/27 (48%), Positives = 22/27 (81%)
 Frame = +2

Query: 383 VSQPNSXILEIKVDPNAIGQECLEKVC 463
           V++P++ ++EI+VD  A G++CL KVC
Sbjct: 5   VTRPDAVVMEIEVDAKANGEDCLNKVC 31


>UniRef50_Q5KZ93 Cluster: Transposase; n=7; Bacillaceae|Rep:
           Transposase - Geobacillus kaustophilus
          Length = 478

 Score = 35.5 bits (78), Expect = 0.56
 Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
 Frame = -1

Query: 394 RLTD*PHFGQHFERKYVKFNKSGRKIFSLM------NLTHATIVXLTRAKYLLKKSFLIR 233
           RL   PH        YV F  S R+  + M      +++H T++    +  L  K F+ R
Sbjct: 222 RLAASPHVLGLVLTYYVNFGMSSRETAAAMKDIHGVSISHQTVLNYANSVALWIKPFVDR 281

Query: 232 SVKCLSRILCGSKTANTSKRRPXYVKFTTEMIKKIVTS 119
               LS   CG +T    K R  Y+ F  + +KKIV S
Sbjct: 282 FPYELSGSFCGDETYIRVKGRWHYLFFMFDAVKKIVLS 319


>UniRef50_UPI0000587F1B Cluster: PREDICTED: similar to myosin
           regulatory light chain interacting protein; n=1;
           Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
           myosin regulatory light chain interacting protein -
           Strongylocentrotus purpuratus
          Length = 429

 Score = 34.7 bits (76), Expect = 0.99
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +2

Query: 383 VSQPNSXILEIKVDPNAIGQECLEKVC 463
           + +P+  +LEI+V P A+G ECL+  C
Sbjct: 5   IKKPDGNVLEIEVGPKAVGLECLDLTC 31


>UniRef50_Q17NT7 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 523

 Score = 34.7 bits (76), Expect = 0.99
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 374 MW-LVSQPNSXILEIKVDPNAIGQECLEKVC 463
           MW L++ PN     ++ DP    QECLEKVC
Sbjct: 1   MWCLINLPNGTTSGVQCDPKKNSQECLEKVC 31


>UniRef50_Q8WY64 Cluster: E3 ubiquitin-protein ligase MYLIP; n=22;
           Euteleostomi|Rep: E3 ubiquitin-protein ligase MYLIP -
           Homo sapiens (Human)
          Length = 445

 Score = 32.3 bits (70), Expect = 5.3
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +2

Query: 383 VSQPNSXILEIKVDPNAIGQECLEKVC 463
           V++P++ ++E++V+  A G++CL +VC
Sbjct: 5   VTRPDAVLMEVEVEAKANGEDCLNQVC 31


>UniRef50_Q8IBR4 Cluster: Putative uncharacterized protein
           PF07_0075; n=3; Plasmodium|Rep: Putative uncharacterized
           protein PF07_0075 - Plasmodium falciparum (isolate 3D7)
          Length = 457

 Score = 31.9 bits (69), Expect = 7.0
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +3

Query: 222 HFTERIK-KDFFNKYFARVRXTIVACVKFINENILRPDLLNFTYFRSKC 365
           H TE+ K  D  NK F       + C  +INENIL+  +   T+F S C
Sbjct: 156 HNTEKRKGMDINNKIF---NIKYITCAFYINENILQCSIQLLTFFLSSC 201


>UniRef50_A5K2I4 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1328

 Score = 31.5 bits (68), Expect = 9.2
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -1

Query: 361 FERKYVKFNKSG-RKIFSLMNLTHATIVXLTRAKYLLKKS 245
           F +K  K N+SG +KIFSL +  H+ +  LT   YLL  S
Sbjct: 205 FRKKVYKVNESGGKKIFSLEDDLHSIVNILTVCDYLLTYS 244


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 437,583,949
Number of Sequences: 1657284
Number of extensions: 7771103
Number of successful extensions: 16529
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16527
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24771286585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)