Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060316.seq
         (463 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007055-1|AAP35704.1|  445|Homo sapiens myosin regulatory light...    32   0.84 
BC002860-1|AAH02860.1|  445|Homo sapiens myosin regulatory light...    32   0.84 
AL021407-5|CAI19548.1|  445|Homo sapiens myosin regulatory light...    32   0.84 
AF258586-1|AAG23789.1|  445|Homo sapiens PP5242 protein.               32   0.84 
AF187016-1|AAF18974.1|  445|Homo sapiens myosin regulatory light...    32   0.84 
AF006004-1|AAQ13409.1|  445|Homo sapiens BZF1 protein.                 32   0.84 
AF006003-1|AAQ13408.1|  445|Homo sapiens BZF1 protein.                 32   0.84 
BC142944-1|AAI42945.1| 1076|Homo sapiens RGSL1 protein protein.        29   7.8  

>BT007055-1|AAP35704.1|  445|Homo sapiens myosin regulatory light
           chain interacting protein protein.
          Length = 445

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +2

Query: 383 VSQPNSXILEIKVDPNAIGQECLEKVC 463
           V++P++ ++E++V+  A G++CL +VC
Sbjct: 5   VTRPDAVLMEVEVEAKANGEDCLNQVC 31


>BC002860-1|AAH02860.1|  445|Homo sapiens myosin regulatory light
           chain interacting protein protein.
          Length = 445

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +2

Query: 383 VSQPNSXILEIKVDPNAIGQECLEKVC 463
           V++P++ ++E++V+  A G++CL +VC
Sbjct: 5   VTRPDAVLMEVEVEAKANGEDCLNQVC 31


>AL021407-5|CAI19548.1|  445|Homo sapiens myosin regulatory light
           chain interacting protein protein.
          Length = 445

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +2

Query: 383 VSQPNSXILEIKVDPNAIGQECLEKVC 463
           V++P++ ++E++V+  A G++CL +VC
Sbjct: 5   VTRPDAVLMEVEVEAKANGEDCLNQVC 31


>AF258586-1|AAG23789.1|  445|Homo sapiens PP5242 protein.
          Length = 445

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +2

Query: 383 VSQPNSXILEIKVDPNAIGQECLEKVC 463
           V++P++ ++E++V+  A G++CL +VC
Sbjct: 5   VTRPDAVLMEVEVEAKANGEDCLNQVC 31


>AF187016-1|AAF18974.1|  445|Homo sapiens myosin regulatory light
           chain interacting protein MIR protein.
          Length = 445

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +2

Query: 383 VSQPNSXILEIKVDPNAIGQECLEKVC 463
           V++P++ ++E++V+  A G++CL +VC
Sbjct: 5   VTRPDAVLMEVEVEAKANGEDCLNQVC 31


>AF006004-1|AAQ13409.1|  445|Homo sapiens BZF1 protein.
          Length = 445

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +2

Query: 383 VSQPNSXILEIKVDPNAIGQECLEKVC 463
           V++P++ ++E++V+  A G++CL +VC
Sbjct: 5   VTRPDAVLMEVEVEAKANGEDCLNQVC 31


>AF006003-1|AAQ13408.1|  445|Homo sapiens BZF1 protein.
          Length = 445

 Score = 32.3 bits (70), Expect = 0.84
 Identities = 10/27 (37%), Positives = 22/27 (81%)
 Frame = +2

Query: 383 VSQPNSXILEIKVDPNAIGQECLEKVC 463
           V++P++ ++E++V+  A G++CL +VC
Sbjct: 5   VTRPDAVLMEVEVEAKANGEDCLNQVC 31


>BC142944-1|AAI42945.1| 1076|Homo sapiens RGSL1 protein protein.
          Length = 1076

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = +2

Query: 371 KMWLVSQPNSXILEIKVDPNAIGQECLEKVC 463
           KMW +  P+S  LE+ + P+AIG   L++ C
Sbjct: 254 KMWQLVDPDSWSLEMDLKPDAIGMP-LQETC 283


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,343,012
Number of Sequences: 237096
Number of extensions: 1155453
Number of successful extensions: 1440
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)