Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060315.seq
         (686 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.1  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   4.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.5  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   9.5  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.5  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   9.5  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   9.5  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   9.5  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = +2

Query: 287 DLGDHYLDCGDLTSALKCYSRARDYCTSG--KHL 382
           D GD ++ CG     LK +   +   TSG  KH+
Sbjct: 394 DTGDKHIQCGRRADVLKFWFMWKAKGTSGLEKHV 427


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 359 YCTSGKHLVMMCLNVVKVS 415
           +C   KHLV +  N+VKV+
Sbjct: 226 FCNKIKHLVNLHKNLVKVA 244


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +3

Query: 54  VMTTYNVNLYHTLHKKLSEAVASAGLPDIAGSQDIPVLDTIWVESKTKKAAI 209
           V++  N+   HT    L   VAS+ +     S  I V    +V S  K+A +
Sbjct: 472 VVSHLNITAIHTNDGGLYRCVASSKVGSADHSARINVYGLPFVRSMEKQAIV 523


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 307 RLWRSHQCLEMLLES*RLLHKWK 375
           R  + HQ L +L++   L+ KW+
Sbjct: 124 RFSQPHQILTLLMDIDSLITKWR 146


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 307 RLWRSHQCLEMLLES*RLLHKWK 375
           R  + HQ L +L++   L+ KW+
Sbjct: 284 RFSQPHQILTLLMDIDSLITKWR 306


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 307 RLWRSHQCLEMLLES*RLLHKWK 375
           R  + HQ L +L++   L+ KW+
Sbjct: 284 RFSQPHQILTLLMDIDSLITKWR 306


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 89  CVIQIYVICGHDIGYGHFQSFQSQ 18
           CV+  Y+     +  GH+++F SQ
Sbjct: 196 CVVNQYIKQVCKLNNGHYKNFLSQ 219


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory
          receptor candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 89 CVIQIYVICGHDIGYGHFQSFQSQ 18
          CV+  Y+     +  GH+++F SQ
Sbjct: 21 CVVNQYIKQVCKLNNGHYKNFLSQ 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,638
Number of Sequences: 336
Number of extensions: 2777
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)