Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060315.seq
         (686 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.8  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   6.8  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   6.8  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         23   9.0  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -1

Query: 314  HNLDNGHPNHHG 279
            H+L +GH +HHG
Sbjct: 1316 HHLHHGHHHHHG 1327


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = +3

Query: 162 VLDTIWVESKTKKAAIKLEKLDTDLKNYKTNQSKKVSEEAM 284
           VLD  W+  + K   I L     +LK Y   +  K + + +
Sbjct: 251 VLDHPWIRDRDKLQRIHLGDTVEELKRYNARRKLKAAVQTV 291


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 138  IAGSQDIPVLDTIWVESKTKKAAIKLEKLDTDLKNYKTNQSKKVSE 275
            IAG   +P +D  + +   K    +LEK +  LK Y     K + +
Sbjct: 943  IAGLGALPNVDASYQKMSLKSLFKELEKANQHLKKYNHVNKKALDQ 988


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 14/55 (25%), Positives = 26/55 (47%)
 Frame = +3

Query: 9   GPSLRLEALKMAISYVMTTYNVNLYHTLHKKLSEAVASAGLPDIAGSQDIPVLDT 173
           GP   +  L  ++      + +N+Y  L ++ ++A A AG      S D+ +L T
Sbjct: 73  GPRPAVRHLHSSVGKSAPQFLLNVYDQLQQEETDAPAGAGRIRKVRSTDMDILIT 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 651,108
Number of Sequences: 2352
Number of extensions: 12277
Number of successful extensions: 80
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)