Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060315.seq
(686 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051972-1|AAK93396.1| 525|Drosophila melanogaster LD43563p pro... 171 1e-42
AE014296-3080|AAF49212.1| 525|Drosophila melanogaster CG3889-PA... 171 1e-42
AF129080-1|AAD28605.1| 525|Drosophila melanogaster COP9 signalo... 169 4e-42
BT022388-1|AAY54804.1| 364|Drosophila melanogaster IP11532p pro... 76 5e-14
AE014134-2521|AAF53409.1| 364|Drosophila melanogaster CG4697-PA... 76 5e-14
AE014296-1462|AAF50412.1| 2444|Drosophila melanogaster CG6915-PA... 31 1.1
>AY051972-1|AAK93396.1| 525|Drosophila melanogaster LD43563p
protein.
Length = 525
Score = 171 bits (415), Expect = 1e-42
Identities = 84/136 (61%), Positives = 98/136 (72%)
Frame = +2
Query: 188 KNKKSCHKTGKARY*FEKL*NKSIKESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYCT 367
K KK+ K K + + SIKESIRRGHDDL DHYL CGDLT+ALKCYSRARDYCT
Sbjct: 166 KMKKAALKLEKLDSDLKNYKSNSIKESIRRGHDDLADHYLSCGDLTNALKCYSRARDYCT 225
Query: 368 SGKHLVMMCLNVVKVSVYLQNWAHVLNYVSKAEATPDFNEIPGKDSNSQF*LV*NVQQD* 547
SGKH+V MCLNV+KVS+YLQNWAHV++Y+SKAE+TPDF E K++N+Q
Sbjct: 226 SGKHVVNMCLNVIKVSIYLQNWAHVMSYISKAESTPDFAE-GSKEANAQVHTRLECAAGL 284
Query: 548 PSWATKKYKSAAKHFL 595
KKYK AAKHFL
Sbjct: 285 AELQQKKYKVAAKHFL 300
Score = 107 bits (257), Expect = 1e-23
Identities = 85/264 (32%), Positives = 126/264 (47%), Gaps = 39/264 (14%)
Frame = +3
Query: 12 PSLRLEALKMAISYVMTTYNVNLYHTLHKKLSE------------------------AVA 119
P L +EALKMAI+YV TTYNVNLY LHK+LS+ +A
Sbjct: 69 PVLAVEALKMAITYVQTTYNVNLYQVLHKRLSDLNAGNAPAPPANAGGDQAGAAAPGPLA 128
Query: 120 SAGLPDIAG--------------SQDIPVLDTIWVESKTKKAAIKLEKLDTDLKNYKTNQ 257
+A LPDIA +D D WV++K KKAA+KLEKLD+DLKNYK+N
Sbjct: 129 AAPLPDIAAQPVAQAQGQAQPAVEKDAFAYDAAWVDTKMKKAALKLEKLDSDLKNYKSNS 188
Query: 258 SKKVSEEAMMIWVTXXXXV-EISPVP*NATRELEITAQVENILS*CA*M*LKFQYIFKIG 434
K+ +++ +R + +++++ C + +K I+
Sbjct: 189 IKESIRRGHDDLADHYLSCGDLTNALKCYSRARDYCTSGKHVVNMCLNV-IKVS-IYLQN 246
Query: 435 LMF*IMYLKLKRPQTLMKFPEKTATVNFNSFKMCSRISRAGQRKSINLLQNIFWAASIDH 614
+ Y+ K A ++ C+ Q+K + F A+ DH
Sbjct: 247 WAHVMSYISKAESTPDFAEGSKEANAQVHTRLECAAGLAELQQKKYKVAAKHFLNANFDH 306
Query: 615 CEYPELMSSNNVAIYGGLCALATF 686
C++PE++S++NVA+YGGLCALATF
Sbjct: 307 CDFPEMISTSNVAVYGGLCALATF 330
>AE014296-3080|AAF49212.1| 525|Drosophila melanogaster CG3889-PA
protein.
Length = 525
Score = 171 bits (415), Expect = 1e-42
Identities = 84/136 (61%), Positives = 98/136 (72%)
Frame = +2
Query: 188 KNKKSCHKTGKARY*FEKL*NKSIKESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYCT 367
K KK+ K K + + SIKESIRRGHDDL DHYL CGDLT+ALKCYSRARDYCT
Sbjct: 166 KMKKAALKLEKLDSDLKNYKSNSIKESIRRGHDDLADHYLSCGDLTNALKCYSRARDYCT 225
Query: 368 SGKHLVMMCLNVVKVSVYLQNWAHVLNYVSKAEATPDFNEIPGKDSNSQF*LV*NVQQD* 547
SGKH+V MCLNV+KVS+YLQNWAHV++Y+SKAE+TPDF E K++N+Q
Sbjct: 226 SGKHVVNMCLNVIKVSIYLQNWAHVMSYISKAESTPDFAE-GSKEANAQVHTRLECAAGL 284
Query: 548 PSWATKKYKSAAKHFL 595
KKYK AAKHFL
Sbjct: 285 AELQQKKYKVAAKHFL 300
Score = 107 bits (257), Expect = 1e-23
Identities = 85/264 (32%), Positives = 126/264 (47%), Gaps = 39/264 (14%)
Frame = +3
Query: 12 PSLRLEALKMAISYVMTTYNVNLYHTLHKKLSE------------------------AVA 119
P L +EALKMAI+YV TTYNVNLY LHK+LS+ +A
Sbjct: 69 PVLAVEALKMAITYVQTTYNVNLYQVLHKRLSDLNAGNAPAPPANAGGDQAGAAAPGPLA 128
Query: 120 SAGLPDIAG--------------SQDIPVLDTIWVESKTKKAAIKLEKLDTDLKNYKTNQ 257
+A LPDIA +D D WV++K KKAA+KLEKLD+DLKNYK+N
Sbjct: 129 AAPLPDIAAQPVAQAQGQAQPAVEKDAFAYDAAWVDTKMKKAALKLEKLDSDLKNYKSNS 188
Query: 258 SKKVSEEAMMIWVTXXXXV-EISPVP*NATRELEITAQVENILS*CA*M*LKFQYIFKIG 434
K+ +++ +R + +++++ C + +K I+
Sbjct: 189 IKESIRRGHDDLADHYLSCGDLTNALKCYSRARDYCTSGKHVVNMCLNV-IKVS-IYLQN 246
Query: 435 LMF*IMYLKLKRPQTLMKFPEKTATVNFNSFKMCSRISRAGQRKSINLLQNIFWAASIDH 614
+ Y+ K A ++ C+ Q+K + F A+ DH
Sbjct: 247 WAHVMSYISKAESTPDFAEGSKEANAQVHTRLECAAGLAELQQKKYKVAAKHFLNANFDH 306
Query: 615 CEYPELMSSNNVAIYGGLCALATF 686
C++PE++S++NVA+YGGLCALATF
Sbjct: 307 CDFPEMISTSNVAVYGGLCALATF 330
>AF129080-1|AAD28605.1| 525|Drosophila melanogaster COP9
signalosome subunit 1 CSN1 protein.
Length = 525
Score = 169 bits (410), Expect = 4e-42
Identities = 83/136 (61%), Positives = 98/136 (72%)
Frame = +2
Query: 188 KNKKSCHKTGKARY*FEKL*NKSIKESIRRGHDDLGDHYLDCGDLTSALKCYSRARDYCT 367
K KK+ K K + + SIKESIRRGHDDL DHYL CGDLT+ALKCYSRAR+YCT
Sbjct: 166 KMKKAALKLEKLDSDLKNYKSNSIKESIRRGHDDLADHYLSCGDLTNALKCYSRARNYCT 225
Query: 368 SGKHLVMMCLNVVKVSVYLQNWAHVLNYVSKAEATPDFNEIPGKDSNSQF*LV*NVQQD* 547
SGKH+V MCLNV+KVS+YLQNWAHV++Y+SKAE+TPDF E K++N+Q
Sbjct: 226 SGKHVVNMCLNVIKVSIYLQNWAHVMSYISKAESTPDFAE-GSKEANAQVHTRLECAAGL 284
Query: 548 PSWATKKYKSAAKHFL 595
KKYK AAKHFL
Sbjct: 285 AELQQKKYKVAAKHFL 300
Score = 78.6 bits (185), Expect = 7e-15
Identities = 54/123 (43%), Positives = 67/123 (54%), Gaps = 38/123 (30%)
Frame = +3
Query: 12 PSLRLEALKMAISYVMTTYNVNLYHTLHKKLSE------------------------AVA 119
P L +EALKMAI+YV TTYNVNLY LHK+LS+ +A
Sbjct: 69 PVLAVEALKMAITYVQTTYNVNLYQVLHKRLSDLNAGNAPAPPANAGGDQAGAAAPGPLA 128
Query: 120 SAGLPDIAG--------------SQDIPVLDTIWVESKTKKAAIKLEKLDTDLKNYKTNQ 257
+A LPDIA +D D WV++K KKAA+KLEKLD+DLKNYK+N
Sbjct: 129 AAPLPDIAAQPVAQAQGQAQPAVEKDAFAYDAAWVDTKMKKAALKLEKLDSDLKNYKSNS 188
Query: 258 SKK 266
K+
Sbjct: 189 IKE 191
Score = 56.4 bits (130), Expect = 3e-08
Identities = 22/43 (51%), Positives = 32/43 (74%)
Frame = +3
Query: 558 QRKSINLLQNIFWAASIDHCEYPELMSSNNVAIYGGLCALATF 686
Q+K + F A+ DHC++PE++S++NVA+YGG CALATF
Sbjct: 288 QQKKYKVAAKHFLNANFDHCDFPEMISTSNVAVYGGFCALATF 330
>BT022388-1|AAY54804.1| 364|Drosophila melanogaster IP11532p
protein.
Length = 364
Score = 75.8 bits (178), Expect = 5e-14
Identities = 39/109 (35%), Positives = 67/109 (61%)
Frame = +2
Query: 269 IRRGHDDLGDHYLDCGDLTSALKCYSRARDYCTSGKHLVMMCLNVVKVSVYLQNWAHVLN 448
+RR +++GDH+ G+L A+K Y+RAR YCTS ++++ M N+++VS+Y++NW HVL
Sbjct: 139 VRRILEEIGDHHEKSGNLQMAVKFYARARPYCTSSENVINMFRNLIRVSIYMENWWHVLT 198
Query: 449 YVSKAEATPDFNEIPGKDSNSQF*LV*NVQQD*PSWATKKYKSAAKHFL 595
Y+ +A+ E ++ ++ V + K YKSAA++FL
Sbjct: 199 YIDEAKQYAYGFENLAQEVPARLSCVAGLAH----LGLKIYKSAAQYFL 243
Score = 42.7 bits (96), Expect = 5e-04
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 18/99 (18%)
Frame = +3
Query: 12 PSLRLEALKMAISYVMTTYNVNLYHTLHKKL---------SEAVASAGLPDIAGSQD--- 155
P L + AL++A+++V TTYNV LY L+K L +++ + L GS+
Sbjct: 35 PELSVLALELALNHVKTTYNVKLYDELYKTLCVEVDRKYPNQSKGNEELHTTGGSEPSTS 94
Query: 156 ------IPVLDTIWVESKTKKAAIKLEKLDTDLKNYKTN 254
+ D+ WVE +A + L++LD +L K+N
Sbjct: 95 SGRGRVVVPYDSYWVEDNIMEATLMLQELDAELNFKKSN 133
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 618 EYPELMSSNNVAIYGGLCALATF 686
+Y ++++ +V +Y GLCALATF
Sbjct: 251 DYDKIVAPEDVTLYAGLCALATF 273
>AE014134-2521|AAF53409.1| 364|Drosophila melanogaster CG4697-PA
protein.
Length = 364
Score = 75.8 bits (178), Expect = 5e-14
Identities = 39/109 (35%), Positives = 67/109 (61%)
Frame = +2
Query: 269 IRRGHDDLGDHYLDCGDLTSALKCYSRARDYCTSGKHLVMMCLNVVKVSVYLQNWAHVLN 448
+RR +++GDH+ G+L A+K Y+RAR YCTS ++++ M N+++VS+Y++NW HVL
Sbjct: 139 VRRILEEIGDHHEKSGNLQMAVKFYARARPYCTSSENVINMFRNLIRVSIYMENWWHVLT 198
Query: 449 YVSKAEATPDFNEIPGKDSNSQF*LV*NVQQD*PSWATKKYKSAAKHFL 595
Y+ +A+ E ++ ++ V + K YKSAA++FL
Sbjct: 199 YIDEAKQYAYGFENLAQEVPARLSCVAGLAH----LGLKIYKSAAQYFL 243
Score = 42.7 bits (96), Expect = 5e-04
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 18/99 (18%)
Frame = +3
Query: 12 PSLRLEALKMAISYVMTTYNVNLYHTLHKKL---------SEAVASAGLPDIAGSQD--- 155
P L + AL++A+++V TTYNV LY L+K L +++ + L GS+
Sbjct: 35 PELSVLALELALNHVKTTYNVKLYDELYKTLCVEVDRKYPNQSKGNEELHTTGGSEPSTS 94
Query: 156 ------IPVLDTIWVESKTKKAAIKLEKLDTDLKNYKTN 254
+ D+ WVE +A + L++LD +L K+N
Sbjct: 95 SGRGRVVVPYDSYWVEDNIMEATLMLQELDAELNFKKSN 133
Score = 31.5 bits (68), Expect = 1.1
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +3
Query: 618 EYPELMSSNNVAIYGGLCALATF 686
+Y ++++ +V +Y GLCALATF
Sbjct: 251 DYDKIVAPEDVTLYAGLCALATF 273
>AE014296-1462|AAF50412.1| 2444|Drosophila melanogaster CG6915-PA
protein.
Length = 2444
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/66 (27%), Positives = 29/66 (43%)
Frame = +2
Query: 275 RGHDDLGDHYLDCGDLTSALKCYSRARDYCTSGKHLVMMCLNVVKVSVYLQNWAHVLNYV 454
R +LG + G ALKCY R + T M CL + +V L+ ++Y+
Sbjct: 966 RALSNLGSVHESLGQQAEALKCYERQLELSTDRLAKAMACLALGRVHHQLEQHNQAVDYL 1025
Query: 455 SKAEAT 472
+ A+
Sbjct: 1026 RQGLAS 1031
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,522,134
Number of Sequences: 53049
Number of extensions: 503170
Number of successful extensions: 1365
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1359
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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