Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060314.seq
         (685 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykin...    32   0.015
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           25   1.7  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   2.9  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           23   9.0  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   9.0  

>AJ439060-12|CAD27763.1|  450|Anopheles gambiae putative tachykinin
           receptor protein.
          Length = 450

 Score = 32.3 bits (70), Expect = 0.015
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +3

Query: 351 PLQFKF-RAKFYPEDVDDELIQEITLKLFYLQVKNAILSDEIYC 479
           P Q  F    +YPE      IQE+ L +++L + N++ +  IYC
Sbjct: 312 PFQIYFILTSYYPELTKKPYIQEVYLAIYWLAMSNSMYNPIIYC 355


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 614 DVPRGMGAEHHELVAGTPRDAS 679
           ++P   GA HHEL  G  R A+
Sbjct: 2   NIPARHGANHHELFVGIGRSAA 23


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 582 LLPQRVTDQHKMSREEWEQSITNWWQEH 665
           L+P   TD+ +   EE    +  W Q+H
Sbjct: 725 LVPATTTDEVRARAEEAVDQVQRWMQQH 752


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 396 DDELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASTRSKPDTENT 539
           +DE +QE+T KL   Q     L  E+    +    LA    + +TE T
Sbjct: 735 EDERLQEMTRKLHQRQQHMKKLQQELLTNEQQLQQLAGVVFEGETEET 782


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 609 HKMSREEWEQSITNWWQE 662
           H++  E W+ + TN++QE
Sbjct: 8   HELQEEGWKLNRTNYYQE 25


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 669 RGVPATSS*CSAPIPRGTSCV 607
           RG   T   C+AP+  G +CV
Sbjct: 23  RGQAQTCRNCAAPVHHGLNCV 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 736,758
Number of Sequences: 2352
Number of extensions: 15158
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)