Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060314.seq
(685 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 188 2e-48
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 188 2e-48
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 188 2e-48
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 188 2e-48
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 188 2e-48
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 188 2e-48
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 188 2e-48
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 188 2e-48
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 188 2e-48
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 108 3e-24
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 108 3e-24
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 108 3e-24
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 60 1e-09
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 60 1e-09
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical pr... 33 0.25
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 33 0.25
AL117207-16|CAH60778.1| 402|Caenorhabditis elegans Hypothetical... 31 0.58
Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z83216-8|CAB05677.1| 261|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF077537-7|AAC26276.1| 203|Caenorhabditis elegans Hypothetical ... 29 3.1
AL033514-28|CAA22089.1| 340|Caenorhabditis elegans Hypothetical... 28 5.4
Z81575-7|CAB04638.1| 367|Caenorhabditis elegans Hypothetical pr... 28 7.1
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 28 7.1
AL132948-26|CAD31827.1| 142|Caenorhabditis elegans Hypothetical... 27 9.4
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 188 bits (459), Expect = 2e-48
Identities = 86/138 (62%), Positives = 105/138 (76%)
Frame = +3
Query: 255 WFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVDDELIQEITLKLF 434
W+FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDV +E+IQ++T++LF
Sbjct: 45 WYFGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLF 104
Query: 435 YLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGPGFLANDRLLPQRVTDQHK 614
YLQVK+ ILSDEIYCPPETSVLLAS + + +P G L DRLLPQRV Q K
Sbjct: 105 YLQVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFK 164
Query: 615 MSREEWEQSITNWWQEHR 668
++ EEWE+ I WW +HR
Sbjct: 165 LNSEEWERRIMTWWADHR 182
Score = 73.3 bits (172), Expect = 1e-13
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +1
Query: 121 MVAGGKQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREV 255
MVA G +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+
Sbjct: 1 MVAAG-DINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREI 44
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 188 bits (459), Expect = 2e-48
Identities = 86/138 (62%), Positives = 105/138 (76%)
Frame = +3
Query: 255 WFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVDDELIQEITLKLF 434
W+FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDV +E+IQ++T++LF
Sbjct: 44 WYFGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLF 103
Query: 435 YLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGPGFLANDRLLPQRVTDQHK 614
YLQVK+ ILSDEIYCPPETSVLLAS + + +P G L DRLLPQRV Q K
Sbjct: 104 YLQVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFK 163
Query: 615 MSREEWEQSITNWWQEHR 668
++ EEWE+ I WW +HR
Sbjct: 164 LNSEEWERRIMTWWADHR 181
Score = 71.7 bits (168), Expect = 4e-13
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +1
Query: 136 KQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREV 255
K +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREI 43
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 188 bits (459), Expect = 2e-48
Identities = 86/138 (62%), Positives = 105/138 (76%)
Frame = +3
Query: 255 WFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVDDELIQEITLKLF 434
W+FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDV +E+IQ++T++LF
Sbjct: 44 WYFGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLF 103
Query: 435 YLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGPGFLANDRLLPQRVTDQHK 614
YLQVK+ ILSDEIYCPPETSVLLAS + + +P G L DRLLPQRV Q K
Sbjct: 104 YLQVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFK 163
Query: 615 MSREEWEQSITNWWQEHR 668
++ EEWE+ I WW +HR
Sbjct: 164 LNSEEWERRIMTWWADHR 181
Score = 71.7 bits (168), Expect = 4e-13
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +1
Query: 136 KQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREV 255
K +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREI 43
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 188 bits (459), Expect = 2e-48
Identities = 86/138 (62%), Positives = 105/138 (76%)
Frame = +3
Query: 255 WFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVDDELIQEITLKLF 434
W+FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDV +E+IQ++T++LF
Sbjct: 44 WYFGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLF 103
Query: 435 YLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGPGFLANDRLLPQRVTDQHK 614
YLQVK+ ILSDEIYCPPETSVLLAS + + +P G L DRLLPQRV Q K
Sbjct: 104 YLQVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFK 163
Query: 615 MSREEWEQSITNWWQEHR 668
++ EEWE+ I WW +HR
Sbjct: 164 LNSEEWERRIMTWWADHR 181
Score = 71.7 bits (168), Expect = 4e-13
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +1
Query: 136 KQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREV 255
K +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREI 43
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 188 bits (459), Expect = 2e-48
Identities = 86/138 (62%), Positives = 105/138 (76%)
Frame = +3
Query: 255 WFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVDDELIQEITLKLF 434
W+FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDV +E+IQ++T++LF
Sbjct: 45 WYFGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLF 104
Query: 435 YLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGPGFLANDRLLPQRVTDQHK 614
YLQVK+ ILSDEIYCPPETSVLLAS + + +P G L DRLLPQRV Q K
Sbjct: 105 YLQVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFK 164
Query: 615 MSREEWEQSITNWWQEHR 668
++ EEWE+ I WW +HR
Sbjct: 165 LNSEEWERRIMTWWADHR 182
Score = 73.3 bits (172), Expect = 1e-13
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +1
Query: 121 MVAGGKQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREV 255
MVA G +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+
Sbjct: 1 MVAAG-DINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREI 44
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 188 bits (459), Expect = 2e-48
Identities = 86/138 (62%), Positives = 105/138 (76%)
Frame = +3
Query: 255 WFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVDDELIQEITLKLF 434
W+FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDV +E+IQ++T++LF
Sbjct: 44 WYFGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLF 103
Query: 435 YLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGPGFLANDRLLPQRVTDQHK 614
YLQVK+ ILSDEIYCPPETSVLLAS + + +P G L DRLLPQRV Q K
Sbjct: 104 YLQVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFK 163
Query: 615 MSREEWEQSITNWWQEHR 668
++ EEWE+ I WW +HR
Sbjct: 164 LNSEEWERRIMTWWADHR 181
Score = 71.7 bits (168), Expect = 4e-13
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +1
Query: 136 KQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREV 255
K +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREI 43
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 188 bits (459), Expect = 2e-48
Identities = 86/138 (62%), Positives = 105/138 (76%)
Frame = +3
Query: 255 WFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVDDELIQEITLKLF 434
W+FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDV +E+IQ++T++LF
Sbjct: 44 WYFGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLF 103
Query: 435 YLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGPGFLANDRLLPQRVTDQHK 614
YLQVK+ ILSDEIYCPPETSVLLAS + + +P G L DRLLPQRV Q K
Sbjct: 104 YLQVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFK 163
Query: 615 MSREEWEQSITNWWQEHR 668
++ EEWE+ I WW +HR
Sbjct: 164 LNSEEWERRIMTWWADHR 181
Score = 71.7 bits (168), Expect = 4e-13
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +1
Query: 136 KQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREV 255
K +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREI 43
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 188 bits (459), Expect = 2e-48
Identities = 86/138 (62%), Positives = 105/138 (76%)
Frame = +3
Query: 255 WFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVDDELIQEITLKLF 434
W+FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDV +E+IQ++T++LF
Sbjct: 45 WYFGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLF 104
Query: 435 YLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGPGFLANDRLLPQRVTDQHK 614
YLQVK+ ILSDEIYCPPETSVLLAS + + +P G L DRLLPQRV Q K
Sbjct: 105 YLQVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFK 164
Query: 615 MSREEWEQSITNWWQEHR 668
++ EEWE+ I WW +HR
Sbjct: 165 LNSEEWERRIMTWWADHR 182
Score = 73.3 bits (172), Expect = 1e-13
Identities = 36/45 (80%), Positives = 41/45 (91%)
Frame = +1
Query: 121 MVAGGKQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREV 255
MVA G +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+
Sbjct: 1 MVAAG-DINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREI 44
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 188 bits (459), Expect = 2e-48
Identities = 86/138 (62%), Positives = 105/138 (76%)
Frame = +3
Query: 255 WFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVDDELIQEITLKLF 434
W+FGLQYTD+KG TW+KL KKV+ QDVKK+ L FKFRAKFYPEDV +E+IQ++T++LF
Sbjct: 44 WYFGLQYTDNKGFPTWLKLNKKVLSQDVKKDPTLVFKFRAKFYPEDVAEEIIQDVTMRLF 103
Query: 435 YLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGPGFLANDRLLPQRVTDQHK 614
YLQVK+ ILSDEIYCPPETSVLLAS + + +P G L DRLLPQRV Q K
Sbjct: 104 YLQVKDGILSDEIYCPPETSVLLASYAMQAKYGDYVPETHVAGCLTADRLLPQRVLGQFK 163
Query: 615 MSREEWEQSITNWWQEHR 668
++ EEWE+ I WW +HR
Sbjct: 164 LNSEEWERRIMTWWADHR 181
Score = 71.7 bits (168), Expect = 4e-13
Identities = 33/40 (82%), Positives = 38/40 (95%)
Frame = +1
Query: 136 KQMNVRVTTMDAELEFAIQQTTTGKQLFDQVVKTIGLREV 255
K +NVRVT+MD+ELEFAIQ +TTGKQLFDQVVKTIGLRE+
Sbjct: 4 KAINVRVTSMDSELEFAIQSSTTGKQLFDQVVKTIGLREI 43
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 108 bits (260), Expect = 3e-24
Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Frame = +3
Query: 255 WFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENP---LQFKFRAKFYPEDVDDELIQEITL 425
W+FGLQ+T+ K W++ K + QD++K+ F F KFYPEDV+ E+I + T
Sbjct: 53 WYFGLQFTNKKNIPCWLQNDKTICGQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATR 112
Query: 426 KLFYLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGP-GFLANDRLLPQRVT 602
LF+LQ++ AILS +YC PE SVLLAS + + CT G + D+ LP+ V
Sbjct: 113 HLFFLQIREAILSMNLYCSPEASVLLASFAVQAMHGD----CTEEVGPIDLDKHLPKSVI 168
Query: 603 DQHKMSREEWEQSITNWWQEH 665
DQ+ MS + W I WW +
Sbjct: 169 DQYDMSADMWRDRIKRWWSRN 189
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +1
Query: 136 KQMNVRVTTMDAELE-FAIQQTTTGKQLFDQVVKTIGLRE 252
K + +V+TMDA+LE I++T TG+ LF+ V + IGLRE
Sbjct: 12 KPIYAKVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRE 51
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 108 bits (260), Expect = 3e-24
Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Frame = +3
Query: 255 WFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENP---LQFKFRAKFYPEDVDDELIQEITL 425
W+FGLQ+T+ K W++ K + QD++K+ F F KFYPEDV+ E+I + T
Sbjct: 53 WYFGLQFTNKKNIPCWLQNDKTICGQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATR 112
Query: 426 KLFYLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGP-GFLANDRLLPQRVT 602
LF+LQ++ AILS +YC PE SVLLAS + + CT G + D+ LP+ V
Sbjct: 113 HLFFLQIREAILSMNLYCSPEASVLLASFAVQAMHGD----CTEEVGPIDLDKHLPKSVI 168
Query: 603 DQHKMSREEWEQSITNWWQEH 665
DQ+ MS + W I WW +
Sbjct: 169 DQYDMSADMWRDRIKRWWSRN 189
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +1
Query: 136 KQMNVRVTTMDAELE-FAIQQTTTGKQLFDQVVKTIGLRE 252
K + +V+TMDA+LE I++T TG+ LF+ V + IGLRE
Sbjct: 12 KPIYAKVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRE 51
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 108 bits (260), Expect = 3e-24
Identities = 57/141 (40%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Frame = +3
Query: 255 WFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENP---LQFKFRAKFYPEDVDDELIQEITL 425
W+FGLQ+T+ K W++ K + QD++K+ F F KFYPEDV+ E+I + T
Sbjct: 53 WYFGLQFTNKKNIPCWLQNDKTICGQDIQKDTSDGTFNFLFLVKFYPEDVEPEIILDATR 112
Query: 426 KLFYLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGP-GFLANDRLLPQRVT 602
LF+LQ++ AILS +YC PE SVLLAS + + CT G + D+ LP+ V
Sbjct: 113 HLFFLQIREAILSMNLYCSPEASVLLASFAVQAMHGD----CTEEVGPIDLDKHLPKSVI 168
Query: 603 DQHKMSREEWEQSITNWWQEH 665
DQ+ MS + W I WW +
Sbjct: 169 DQYDMSADMWRDRIKRWWSRN 189
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/40 (50%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +1
Query: 136 KQMNVRVTTMDAELE-FAIQQTTTGKQLFDQVVKTIGLRE 252
K + +V+TMDA+LE I++T TG+ LF+ V + IGLRE
Sbjct: 12 KPIYAKVSTMDADLEKIVIEKTWTGRHLFEAVCRIIGLRE 51
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 60.5 bits (140), Expect = 1e-09
Identities = 35/113 (30%), Positives = 57/113 (50%)
Frame = +3
Query: 258 FFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVDDELIQEITLKLFY 437
+FGLQYTD W+ KKV +Q V P +FR KF+ + L +E+T F+
Sbjct: 75 YFGLQYTDPFNVQHWLDPTKKVAKQ-VAIGPPFTLRFRVKFFTSEPSSNLKEELTRYQFF 133
Query: 438 LQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGPGFLANDRLLPQR 596
LQ+K I S + CP + ++ LA+ + + + P F++ R P++
Sbjct: 134 LQIKQDISSGRLQCPHQLAIELAAFALQSELGDYNPELHTALFISEFRFHPEQ 186
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 60.5 bits (140), Expect = 1e-09
Identities = 35/113 (30%), Positives = 57/113 (50%)
Frame = +3
Query: 258 FFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVDDELIQEITLKLFY 437
+FGLQYTD W+ KKV +Q V P +FR KF+ + L +E+T F+
Sbjct: 91 YFGLQYTDPFNVQHWLDPTKKVAKQ-VAIGPPFTLRFRVKFFTSEPSSNLKEELTRYQFF 149
Query: 438 LQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGPGFLANDRLLPQR 596
LQ+K I S + CP + ++ LA+ + + + P F++ R P++
Sbjct: 150 LQIKQDISSGRLQCPHQLAIELAAFALQSELGDYNPELHTALFISEFRFHPEQ 202
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 51.6 bits (118), Expect = 5e-07
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +3
Query: 258 FFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFY-PEDVDDELIQEITLKLF 434
+FGL + D G+ W+ K +++Q +F F KFY P +D L +E T LF
Sbjct: 85 YFGLSFIDINGNHCWLDREKTILRQITNGSTDAKFYFVVKFYTPNPID--LEEEYTRYLF 142
Query: 435 YLQVKNAILSDEIYCPPETSVLLAS 509
+Q+K + E++C T+ LL++
Sbjct: 143 TMQIKRDLALGELHCSDNTASLLSA 167
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 207 EATLRSSCEDDRPPRGWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFY 383
EA R D +F L + D +G W+ K + +Q K P +F F KFY
Sbjct: 59 EALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFY 116
Query: 384 PEDVDDELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLAS 509
P ++ + +LQ++ +L+ + +T LL S
Sbjct: 117 P-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGS 157
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 207 EATLRSSCEDDRPPRGWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFY 383
EA R D +F L + D +G W+ K + +Q K P +F F KFY
Sbjct: 48 EALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFY 105
Query: 384 PEDVDDELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLAS 509
P ++ + +LQ++ +L+ + +T LL S
Sbjct: 106 P-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGS 146
>Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 207 EATLRSSCEDDRPPRGWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFY 383
EA R D +F L + D +G W+ K + +Q K P +F F KFY
Sbjct: 48 EALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFY 105
Query: 384 PEDVDDELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLAS 509
P ++ + +LQ++ +L+ + +T LL S
Sbjct: 106 P-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGS 146
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 207 EATLRSSCEDDRPPRGWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFY 383
EA R D +F L + D +G W+ K + +Q K P +F F KFY
Sbjct: 48 EALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFY 105
Query: 384 PEDVDDELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLAS 509
P ++ + +LQ++ +L+ + +T LL S
Sbjct: 106 P-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGS 146
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 207 EATLRSSCEDDRPPRGWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFY 383
EA R D +F L + D +G W+ K + +Q K P +F F KFY
Sbjct: 59 EALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFY 116
Query: 384 PEDVDDELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLAS 509
P ++ + +LQ++ +L+ + +T LL S
Sbjct: 117 P-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGS 157
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 207 EATLRSSCEDDRPPRGWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFY 383
EA R D +F L + D +G W+ K + +Q K P +F F KFY
Sbjct: 48 EALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFY 105
Query: 384 PEDVDDELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLAS 509
P ++ + +LQ++ +L+ + +T LL S
Sbjct: 106 P-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGS 146
>Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 207 EATLRSSCEDDRPPRGWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFY 383
EA R D +F L + D +G W+ K + +Q K P +F F KFY
Sbjct: 48 EALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFY 105
Query: 384 PEDVDDELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLAS 509
P ++ + +LQ++ +L+ + +T LL S
Sbjct: 106 P-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGS 146
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 32.7 bits (71), Expect = 0.25
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = +3
Query: 207 EATLRSSCEDDRPPRGWFFGLQYTDS-KGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFY 383
EA R D +F L + D +G W+ K + +Q K P +F F KFY
Sbjct: 48 EALFRQVTRDLSIEEREYFSLCFYDKDEGTRHWLYNDKNIAKQI--KGLPWEFSFEVKFY 105
Query: 384 PEDVDDELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLAS 509
P ++ + +LQ++ +L+ + +T LL S
Sbjct: 106 P-TTPTTIVDDHARYYVFLQLRRDLLTGRLPATADTHSLLGS 146
>AL117207-16|CAH60778.1| 402|Caenorhabditis elegans Hypothetical
protein Y60A3A.24 protein.
Length = 402
Score = 31.5 bits (68), Expect = 0.58
Identities = 8/27 (29%), Positives = 21/27 (77%)
Frame = +3
Query: 591 QRVTDQHKMSREEWEQSITNWWQEHRE 671
Q++ +HK++++EW+++I++W + E
Sbjct: 280 QKIFQKHKIAKDEWDKTISDWKNKEEE 306
>Z81133-5|CAB03442.2| 1838|Caenorhabditis elegans Hypothetical protein
T28B8.3a protein.
Length = 1838
Score = 29.5 bits (63), Expect = 2.3
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +3
Query: 579 RLLPQRVTDQHKMSREEWEQSITNWWQEHREMLPR 683
RLL +++ D+H SR E +++ +W +E+++ R
Sbjct: 1204 RLLLEQLFDEHYTSRNEARETLAHWLKENKQKTVR 1238
>Z83216-8|CAB05677.1| 261|Caenorhabditis elegans Hypothetical
protein C08F11.10 protein.
Length = 261
Score = 29.1 bits (62), Expect = 3.1
Identities = 25/83 (30%), Positives = 39/83 (46%)
Frame = +3
Query: 225 SCEDDRPPRGWFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFRAKFYPEDVDDE 404
S DD P G F+GL ++ + L +K QQD E+ + R + Y + D
Sbjct: 8 SIADDGPYSGSFYGLAEDNANHGIFSSILKRKKRQQDKLSEDVKKRCGRVESY-KSCCDR 66
Query: 405 LIQEITLKLFYLQVKNAILSDEI 473
L Q L Y+ V+NA+ S ++
Sbjct: 67 LHQ----ALMYMLVENAVTSKQL 85
>AF077537-7|AAC26276.1| 203|Caenorhabditis elegans Hypothetical
protein F16G10.8 protein.
Length = 203
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +3
Query: 393 VDDELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASTRSKPDTENTIPLCTGPGFL 569
V + ++Q L F L + E CP SVL A+ DTE I L GF+
Sbjct: 65 VTEVILQLTNLSKFQLVSEQLCKISEATCPDLASVLSANVIITTDTEGCIELSCAYGFV 123
>AL033514-28|CAA22089.1| 340|Caenorhabditis elegans Hypothetical
protein Y75B8A.29 protein.
Length = 340
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 207 EATLRSSCEDDRPPRGWFFGLQYTDSKGDLTWIKLYKKVMQQDVKKENPLQFKFR 371
EA + ED+ + G D+ GDL W + +KK+ + K + Q + R
Sbjct: 66 EAKMLDDIEDEYTDNNYNEGYSKMDTDGDLEWEEEFKKLNKDPSKMDKREQERHR 120
>Z81575-7|CAB04638.1| 367|Caenorhabditis elegans Hypothetical
protein R08H2.8 protein.
Length = 367
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -1
Query: 529 VSGLDRVEASNTEVSGGQYISSDKIAFFT 443
V+GL E++N VSGGQY+S + +T
Sbjct: 82 VTGLQLSESNNQIVSGGQYLSVVMLGKYT 110
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 27.9 bits (59), Expect = 7.1
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +2
Query: 479 PSGDLGVAGFYAVQARHGEHNPALHGAGIPGQ*PFTS--SKSDRPTQDVPRG-MGAEHHE 649
PSG +G AG Q RHG P G G PG+ + RP PRG G E+
Sbjct: 148 PSGLVGPAGPAGDQGRHGPPGPT-GGQGGPGEQGDAGRPGAAGRPGPPGPRGEPGTEYRP 206
Query: 650 LVAG 661
AG
Sbjct: 207 GQAG 210
>AL132948-26|CAD31827.1| 142|Caenorhabditis elegans Hypothetical
protein Y39B6A.34 protein.
Length = 142
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/26 (34%), Positives = 18/26 (69%)
Frame = +3
Query: 606 QHKMSREEWEQSITNWWQEHREMLPR 683
Q++++REE Q +++W EH ++ R
Sbjct: 46 QYRLAREELNQWNSDFWAEHNQLFDR 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,156,389
Number of Sequences: 27780
Number of extensions: 350801
Number of successful extensions: 1025
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1016
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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