Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060312.seq
(670 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1246 - 35226759-35226860,35227521-35227715,35227804-352283... 190 7e-49
08_02_0893 + 22327485-22327671,22327756-22328627 178 4e-45
06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143 171 4e-43
01_03_0220 - 13905808-13905831,13906694-13906885,13906960-139075... 161 6e-40
03_02_0491 + 8854438-8854657,8854897-8854942,8855268-8855307,885... 155 2e-38
05_01_0319 + 2503963-2504176,2504316-2504376,2504691-2504769,250... 117 1e-26
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482... 111 5e-25
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416... 111 6e-25
03_06_0366 + 33408671-33408745,33409342-33409398,33410398-334104... 107 8e-24
06_03_0542 + 21959533-21959785,21960732-21960846,21962815-219629... 105 2e-23
10_07_0165 + 13740611-13740706,13741159-13741215,13741523-137416... 103 1e-22
02_02_0075 - 6572385-6572558,6573416-6573607,6574553-6574630,657... 101 4e-22
05_02_0083 + 6450694-6450766,6451391-6451560,6451633-6451704,645... 100 1e-21
01_06_0339 + 28549449-28549529,28549768-28549914,28550027-285500... 96 2e-20
09_02_0241 + 6179869-6180116,6180406-6180436,6182038-6182190,618... 92 3e-19
03_01_0473 - 3639533-3639598,3639848-3639955,3640037-3640126,364... 85 6e-17
08_02_1232 + 25429955-25430392,25430885-25431388,25432657-254328... 73 2e-13
04_03_0847 - 20254736-20254933,20256127-20256201,20257538-202577... 36 0.029
12_02_0758 - 22858221-22858367,22859362-22859460,22859505-228595... 30 1.9
01_05_0343 + 21155237-21155496,21155596-21155842,21155939-211560... 28 5.9
10_03_0033 - 7248131-7248711,7248947-7249079,7249470-7249994,725... 28 7.7
>02_05_1246 -
35226759-35226860,35227521-35227715,35227804-35228363,
35229299-35229476
Length = 344
Score = 190 bits (464), Expect = 7e-49
Identities = 88/128 (68%), Positives = 101/128 (78%)
Frame = +1
Query: 259 SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSL 438
S+EIFL+QP LLELEAP+KICGD+HGQY DLLRLF+YGG+PP+SNYLFLGDYVDRGKQSL
Sbjct: 39 SKEIFLNQPNLLELEAPIKICGDVHGQYSDLLRLFDYGGYPPQSNYLFLGDYVDRGKQSL 98
Query: 439 ETICLXLAYKIKYPENFFLLRGNPSVPASIGFMGFTMSAKGGITLNYGRRSQTAFNCLPV 618
ETICL LAYKIKYPENFFLLRGN + GF K ++ + FNCLPV
Sbjct: 99 ETICLLLAYKIKYPENFFLLRGNHECASVNRIYGFYDECKRRFSVKLWKTFTDCFNCLPV 158
Query: 619 AAIVDEKI 642
AA++DEKI
Sbjct: 159 AALIDEKI 166
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +2
Query: 149 DELNIDNVIKKLLKVRGEKPGMNVQLTXIEIKGLC 253
D + +D++I++L++V+ KPG N QL+ EIK LC
Sbjct: 2 DPVLLDDIIRRLIEVKNLKPGKNAQLSESEIKQLC 36
>08_02_0893 + 22327485-22327671,22327756-22328627
Length = 352
Score = 178 bits (433), Expect = 4e-45
Identities = 81/127 (63%), Positives = 97/127 (76%)
Frame = +1
Query: 262 REIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE 441
++IFLSQP LLELEAP+ +CGDIHGQ+ DLLRLFE+GG PP +NYLFLGDYVDRGKQS+E
Sbjct: 43 KDIFLSQPNLLELEAPINVCGDIHGQFSDLLRLFEFGGLPPTANYLFLGDYVDRGKQSIE 102
Query: 442 TICLXLAYKIKYPENFFLLRGNPSVPASIGFMGFTMSAKGGITLNYGRRSQTAFNCLPVA 621
TICL LAYKIKYP+NFFLLRGN + GF K ++ + FNCLPVA
Sbjct: 103 TICLLLAYKIKYPDNFFLLRGNHECASINRIYGFYDECKRRFSVRLWKLFTDCFNCLPVA 162
Query: 622 AIVDEKI 642
A++D+KI
Sbjct: 163 AVIDDKI 169
>06_01_0457 - 3263519-3263749,3264565-3265175,3265966-3266143
Length = 339
Score = 171 bits (416), Expect = 4e-43
Identities = 87/145 (60%), Positives = 100/145 (68%), Gaps = 17/145 (11%)
Frame = +1
Query: 259 SREIFLSQPILLELEAPLKIC-----------------GDIHGQYYDLLRLFEYGGFPPE 387
++++FLSQP LLELEAP+KIC GDIHGQY DLLRLFEYGGFPPE
Sbjct: 39 AKDVFLSQPNLLELEAPIKICECDCIMLTIILPTYSLTGDIHGQYSDLLRLFEYGGFPPE 98
Query: 388 SNYLFLGDYVDRGKQSLETICLXLAYKIKYPENFFLLRGNPSVPASIGFMGFTMSAKGGI 567
+NYLFLGDYVDRGKQS+ETICL LAYKIKYPENFFLLRGN + GF K
Sbjct: 99 ANYLFLGDYVDRGKQSIETICLLLAYKIKYPENFFLLRGNHECASINRIYGFFDECKRRF 158
Query: 568 TLNYGRRSQTAFNCLPVAAIVDEKI 642
+ + FNCLPVAA++D+KI
Sbjct: 159 NVRIWKVFTDCFNCLPVAALIDDKI 183
>01_03_0220 -
13905808-13905831,13906694-13906885,13906960-13907519,
13910007-13910187
Length = 318
Score = 161 bits (390), Expect = 6e-40
Identities = 74/130 (56%), Positives = 92/130 (70%)
Frame = +1
Query: 253 LKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQ 432
++++ + LSQP LL + AP+KICGDIHGQ+ DLLRLF+ GG+PP S YLFLGDYVDRGKQ
Sbjct: 38 VEAKRVLLSQPNLLRIHAPVKICGDIHGQFVDLLRLFDLGGYPPTSTYLFLGDYVDRGKQ 97
Query: 433 SLETICLXLAYKIKYPENFFLLRGNPSVPASIGFMGFTMSAKGGITLNYGRRSQTAFNCL 612
SLETICL LAYK+KYP+ FLLRGN GF K + + FNCL
Sbjct: 98 SLETICLLLAYKVKYPDKIFLLRGNHEDAKINRVYGFYDECKRRFNVRLWKIFCDCFNCL 157
Query: 613 PVAAIVDEKI 642
P+AA++D+KI
Sbjct: 158 PMAALIDDKI 167
>03_02_0491 +
8854438-8854657,8854897-8854942,8855268-8855307,
8856025-8856090,8856237-8856318,8857036-8857595,
8857681-8857771,8858300-8858316
Length = 373
Score = 155 bits (377), Expect = 2e-38
Identities = 73/107 (68%), Positives = 80/107 (74%)
Frame = +1
Query: 322 GDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLXLAYKIKYPENFFLLR 501
GDIHGQY DLLRLFEYGGFPPE+NYLFLGDYVDRGKQSLETICL LAYKIKYPENFFLLR
Sbjct: 152 GDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLR 211
Query: 502 GNPSVPASIGFMGFTMSAKGGITLNYGRRSQTAFNCLPVAAIVDEKI 642
GN + GF K + + FNCLPVAA++D+KI
Sbjct: 212 GNHECASINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDDKI 258
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 259 SREIFLSQPILLELEAPLKICG 324
SREIFLSQP LLELEAP+KICG
Sbjct: 53 SREIFLSQPNLLELEAPIKICG 74
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/35 (45%), Positives = 26/35 (74%)
Frame = +2
Query: 149 DELNIDNVIKKLLKVRGEKPGMNVQLTXIEIKGLC 253
D + +D++I++LL+VR +PG VQL+ EI+ LC
Sbjct: 16 DAVLLDDIIRRLLEVRTARPGKQVQLSESEIRQLC 50
>05_01_0319 +
2503963-2504176,2504316-2504376,2504691-2504769,
2504861-2504940,2505046-2505140,2505748-2505847,
2506647-2506716,2507657-2507758,2507972-2508053,
2508257-2508304,2508841-2509009,2509089-2509314,
2509961-2510131,2510200-2510438,2510600-2510684,
2510778-2510876,2510954-2511153,2511232-2511307,
2511463-2511675,2511763-2511815,2511999-2512151,
2512474-2512606
Length = 915
Score = 117 bits (281), Expect = 1e-26
Identities = 62/147 (42%), Positives = 90/147 (61%), Gaps = 10/147 (6%)
Frame = +1
Query: 259 SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES------NYLFLGDYVD 420
+ +IF+ +P +L+L+AP+K+ GD+HGQ+ DL+RLF+ G+P + +YLFLGDYVD
Sbjct: 532 AEQIFMQEPTVLQLKAPIKVFGDLHGQFGDLMRLFDEYGYPSTAGDITYIDYLFLGDYVD 591
Query: 421 RGKQSLETICLXLAYKIKYPENFFLLRGNPSVPASIGFMGFTMSAKGGITLNYG----RR 588
RG+ SLETI L LA KI+YPEN L+RGN GF + + + G R
Sbjct: 592 RGQHSLETITLLLALKIEYPENVHLIRGNHEAADINALFGFRLECIERMGESDGIWAWTR 651
Query: 589 SQTAFNCLPVAAIVDEKIFWWSRAVXR 669
FN LP+AA++++KI + R
Sbjct: 652 FNQLFNYLPLAAMIEKKIICMHGGIGR 678
>03_05_0488 - 24847076-24847220,24847823-24847872,24848139-24848278,
24848358-24848493,24848584-24848683,24848837-24848949,
24849034-24849132,24849227-24849311,24849799-24850037,
24850202-24850372,24850544-24850784,24850899-24851172,
24851481-24851660,24852170-24852251,24852336-24852437,
24853315-24853384,24853725-24853824,24853931-24854025,
24854105-24854184,24854361-24854439,24854603-24854663,
24855570-24855984
Length = 1018
Score = 111 bits (267), Expect = 5e-25
Identities = 63/149 (42%), Positives = 88/149 (59%), Gaps = 12/149 (8%)
Frame = +1
Query: 259 SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES------NYLFLGDYVD 420
+ IF S+P +L+L+AP+KI GD+HGQ+ DL+RLF+ G P + +YLFLGDYVD
Sbjct: 683 AERIFSSEPSVLQLKAPVKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVD 742
Query: 421 RGKQSLETICLXLAYKIKYPENFFLLRGNPSVPASIGFMGF------TMSAKGGITLNYG 582
RG+ SLET+ L LA K++YP+N L+RGN GF M + GI
Sbjct: 743 RGQHSLETMTLLLALKVEYPQNVHLIRGNHEAADINALFGFRIECIERMGERDGIWT--W 800
Query: 583 RRSQTAFNCLPVAAIVDEKIFWWSRAVXR 669
R FN LP+AA++++KI + R
Sbjct: 801 HRMNRLFNWLPLAALIEKKIICMHGGIGR 829
>12_02_1128 - 26341118-26341204,26341302-26341441,26341567-26341663,
26341755-26341830,26341919-26342118,26342199-26342297,
26342395-26342479,26342786-26343024,26343233-26343403,
26343605-26343848,26343980-26344253,26344755-26344934,
26345342-26345423,26346209-26346278,26346802-26346901,
26347003-26347097,26347181-26347317,26347342-26347420,
26347591-26347651,26348580-26349009
Length = 981
Score = 111 bits (266), Expect = 6e-25
Identities = 64/149 (42%), Positives = 87/149 (58%), Gaps = 12/149 (8%)
Frame = +1
Query: 259 SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES------NYLFLGDYVD 420
+ IF S+P +L+L+AP+KI GD+HGQ+ DL+RLF+ G P + +YLFLGDYVD
Sbjct: 674 AERIFSSEPSVLQLKAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVD 733
Query: 421 RGKQSLETICLXLAYKIKYPENFFLLRGNPSVPASIGFMGF------TMSAKGGITLNYG 582
RG+ SLETI L LA K++YP N L+RGN GF M + GI
Sbjct: 734 RGQHSLETITLLLALKVEYPLNVHLIRGNHEAADINALFGFRIECIERMGERDGIWT--W 791
Query: 583 RRSQTAFNCLPVAAIVDEKIFWWSRAVXR 669
R FN LP+AA++++KI + R
Sbjct: 792 HRMNRLFNWLPLAALIEKKIICMHGGIGR 820
>03_06_0366 +
33408671-33408745,33409342-33409398,33410398-33410481,
33410575-33410646,33410768-33410839,33411011-33411051,
33411517-33411583,33411673-33411864,33411947-33412036,
33412111-33412218,33412513-33412578
Length = 307
Score = 107 bits (257), Expect = 8e-24
Identities = 52/133 (39%), Positives = 81/133 (60%), Gaps = 3/133 (2%)
Frame = +1
Query: 256 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 435
K++EI + + + +++P+ ICGDIHGQ++DL LF GG P++NYLF+GDYVDRG S
Sbjct: 32 KAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYS 91
Query: 436 LETICLXLAYKIKYPENFFLLRGN---PSVPASIGFMGFTMSAKGGITLNYGRRSQTAFN 606
+ET+ L +A K++YP+ +LRGN + GF + G N + F+
Sbjct: 92 VETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG--NANVWKTFTDLFD 149
Query: 607 CLPVAAIVDEKIF 645
P+ A+V+ +IF
Sbjct: 150 YFPLTALVESEIF 162
>06_03_0542 +
21959533-21959785,21960732-21960846,21962815-21962923,
21963027-21963104,21964200-21964391,21964995-21965168
Length = 306
Score = 105 bits (253), Expect = 2e-23
Identities = 54/148 (36%), Positives = 85/148 (57%), Gaps = 4/148 (2%)
Frame = +1
Query: 214 ECSVDGNRN*RAMLK-SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPES 390
EC G RA+ + ++ I + + + + P+ +CGDIHGQ+YDL+ LF GG P++
Sbjct: 16 ECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDT 75
Query: 391 NYLFLGDYVDRGKQSLETICLXLAYKIKYPENFFLLRGN---PSVPASIGFMGFTMSAKG 561
NYLF+GDYVDRG S+ET+ L +A K++Y + +LRGN + GF + G
Sbjct: 76 NYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYG 135
Query: 562 GITLNYGRRSQTAFNCLPVAAIVDEKIF 645
N + F+ LP+ A+V+ ++F
Sbjct: 136 --NANVWKYFTDLFDYLPLTALVENQVF 161
>10_07_0165 +
13740611-13740706,13741159-13741215,13741523-13741681,
13742315-13742398,13742496-13742567,13742810-13742881,
13743085-13743125,13743296-13743362,13744033-13744224,
13744314-13744403,13744742-13744849,13745089-13745154
Length = 367
Score = 103 bits (247), Expect = 1e-22
Identities = 55/142 (38%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
Frame = +1
Query: 229 GNRN*RAMLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLG 408
GN +K R+ +LS + +++P+ ICGDIHGQ++DL+ LF GG P++NYLF+G
Sbjct: 84 GNARKSYNMKRRK-YLSGIGMKPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMG 142
Query: 409 DYVDRGKQSLETICLXLAYKIKYPENFFLLRGN---PSVPASIGFMGFTMSAKGGITLNY 579
DYVDRG S+ET+ L +A K++YP+ +LRGN + GF + G + N
Sbjct: 143 DYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG--SANV 200
Query: 580 GRRSQTAFNCLPVAAIVDEKIF 645
+ F+ P+ A+V+ +IF
Sbjct: 201 WKIFTDLFDYFPLTALVESEIF 222
>02_02_0075 -
6572385-6572558,6573416-6573607,6574553-6574630,
6574712-6574820,6575442-6575556,6576280-6576535
Length = 307
Score = 101 bits (243), Expect = 4e-22
Identities = 48/133 (36%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Frame = +1
Query: 256 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 435
+++ I + + + + P+ +CGDIHGQ+YDL+ LF GG P++NYLF+GDYVDRG S
Sbjct: 32 QAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGEAPDTNYLFMGDYVDRGYYS 91
Query: 436 LETICLXLAYKIKYPENFFLLRGN---PSVPASIGFMGFTMSAKGGITLNYGRRSQTAFN 606
+ET+ L +A K++Y + +LRGN + GF + G N + F+
Sbjct: 92 VETVSLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYG--NANVWKYFTDLFD 149
Query: 607 CLPVAAIVDEKIF 645
LP+ A+++ ++F
Sbjct: 150 YLPLTALIENQVF 162
>05_02_0083 +
6450694-6450766,6451391-6451560,6451633-6451704,
6451893-6452043,6452709-6452817,6452906-6453023,
6453214-6453361,6453520-6453768,6454209-6454334,
6454474-6454574,6454728-6454802,6455160-6455219
Length = 483
Score = 100 bits (239), Expect = 1e-21
Identities = 50/137 (36%), Positives = 76/137 (55%), Gaps = 5/137 (3%)
Frame = +1
Query: 250 MLKSREIFLSQPILLELEAP----LKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDY 414
+L++ ++ S P L+++ P +CGD+HGQY+DLL +F+ G P E N YLF GD+
Sbjct: 198 VLQTVQLLRSVPSLVDVNVPDGSHFTVCGDVHGQYFDLLNIFKLNGLPSEENPYLFNGDF 257
Query: 415 VDRGKQSLETICLXLAYKIKYPENFFLLRGNPSVPASIGFMGFTMSAKGGITLNYGRRSQ 594
VDRG S+E I A+K YP +L RGN + GF + + +
Sbjct: 258 VDRGSFSVEVILTLFAFKCLYPTGMYLARGNHESKSMNKIYGFEGEVRSKLGEAFIELFA 317
Query: 595 TAFNCLPVAAIVDEKIF 645
AF CLP+A +++ K+F
Sbjct: 318 EAFCCLPLAHVINNKVF 334
>01_06_0339 +
28549449-28549529,28549768-28549914,28550027-28550094,
28550771-28550828,28551474-28551584,28551668-28551718,
28552308-28552451,28552570-28552665,28552781-28552852,
28553392-28553475
Length = 303
Score = 96.3 bits (229), Expect = 2e-20
Identities = 49/126 (38%), Positives = 73/126 (57%), Gaps = 2/126 (1%)
Frame = +1
Query: 262 REIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLE 441
+EI + + + + +P+ +CGDIHGQ++DL++LF GG PE+NY+F+GD+VDRG SLE
Sbjct: 29 KEILIEESNVQPVNSPVTVCGDIHGQFHDLMKLFATGGHVPETNYIFMGDFVDRGFNSLE 88
Query: 442 TICLXLAYKIKYPENFFLLRGNPSVPASIGFMGF--TMSAKGGITLNYGRRSQTAFNCLP 615
+ L K +YP + LLRGN GF K G N R F+ L
Sbjct: 89 VFTILLLLKARYPAHITLLRGNHESRQLTQVYGFYDECQRKYG-NANAWRYCTDVFDYLT 147
Query: 616 VAAIVD 633
++AI++
Sbjct: 148 LSAIIN 153
>09_02_0241 +
6179869-6180116,6180406-6180436,6182038-6182190,
6182921-6182983,6183396-6183664,6184055-6184133,
6184213-6184263
Length = 297
Score = 92.3 bits (219), Expect = 3e-19
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = +1
Query: 316 ICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLXLAYKIKYPENFFL 495
ICGDIHGQ+YD+ LF+ GG P++NYLFLGD+VDRG S+ET L LA K++YP+ L
Sbjct: 94 ICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITL 153
Query: 496 LRGN 507
+RGN
Sbjct: 154 IRGN 157
>03_01_0473 -
3639533-3639598,3639848-3639955,3640037-3640126,
3640203-3640394,3640952-3641018,3641472-3641512,
3641762-3641779,3641984-3642055,3642154-3642237,
3642296-3642373,3642703-3642759,3643374-3643469
Length = 322
Score = 84.6 bits (200), Expect = 6e-17
Identities = 36/67 (53%), Positives = 50/67 (74%)
Frame = +1
Query: 292 LELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLXLAYKI 471
L +++P+ ICGDIHGQ++DL+ LF GG P++NYLF+GDYVDRG S+ET+ L +A KI
Sbjct: 77 LPVKSPVTICGDIHGQFHDLVELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKI 136
Query: 472 KYPENFF 492
F+
Sbjct: 137 TQVYGFY 143
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/28 (60%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = +3
Query: 522 INRIYGFYDECKRRY-NIKLWKTFTDCF 602
I ++YGFYDEC R+Y N +WK FTD F
Sbjct: 136 ITQVYGFYDECLRKYGNANVWKIFTDLF 163
>08_02_1232 +
25429955-25430392,25430885-25431388,25432657-25432803,
25432999-25433106,25433242-25433331
Length = 428
Score = 73.3 bits (172), Expect = 2e-13
Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Frame = +1
Query: 316 ICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSLETICLXLAYKIKYPENFF 492
+ GD+HGQ +D++ L GFP + ++F GDYVDRG LET L LA+K+ P + F
Sbjct: 95 VVGDVHGQLHDVIFLLRDAGFPSDDRVFVFNGDYVDRGAWGLETFLLLLAWKVLLPNSVF 154
Query: 493 LLRGNPSVPASIGFMGFTMSA----KGGITLNYGRRSQTAFNCLPVAAIV 630
LLRGN GF KG Y R+ F LP+A I+
Sbjct: 155 LLRGNHESKYCTSVYGFEQEVNFKYKGQGPQVY-RKFLRCFEDLPLATII 203
>04_03_0847 -
20254736-20254933,20256127-20256201,20257538-20257717,
20257802-20257869,20258563-20259125,20259198-20259235
Length = 373
Score = 35.9 bits (79), Expect = 0.029
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Frame = +1
Query: 316 IC-GDIHGQYYDLLRLFE--YGGFPPESN----YLFLGDYVDRGKQSLETICLXLAYKIK 474
IC GD+HG L L+ PP++ +FLGDY DRG + E I LA +
Sbjct: 39 ICVGDVHGYISKLESLWANLQSALPPDAFATALVVFLGDYCDRGPSTREVIDFLLALPSR 98
Query: 475 YP-ENFFLLRGNPSVPASIGFMG 540
+P + L GN + A F+G
Sbjct: 99 HPAQRHAFLCGNHDL-AFAAFVG 120
>12_02_0758 -
22858221-22858367,22859362-22859460,22859505-22859557,
22859674-22859728,22860204-22860284,22860779-22861213
Length = 289
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/50 (26%), Positives = 25/50 (50%)
Frame = -1
Query: 439 PTTACHGPHSLRGRDSWTPEGSHHTQTTLRGHSIVHVCHRKFSKELQVQV 290
P P +L +++WTP + G+S H+C R+F+ + V++
Sbjct: 99 PCATISSPQALSRKETWTPYLLAVATNSSIGNSTRHICLRRFACKASVKL 148
>01_05_0343 + 21155237-21155496,21155596-21155842,21155939-21156064,
21156291-21156428,21156513-21156650,21156756-21157013,
21157404-21157541,21158023-21158092,21158267-21158480,
21158614-21158719,21159844-21160077,21160836-21161000,
21161083-21161232,21161308-21161399,21161631-21161712,
21161800-21161883,21161980-21162096,21162179-21162289,
21162698-21162892,21164495-21164575,21165671-21165720,
21165978-21165990,21166518-21166600,21166693-21166833,
21166879-21166936,21167023-21167072,21167474-21167582,
21167666-21167727,21168321-21168363
Length = 1204
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 200 HLVLLV-IFLLRYRCLTHLCLCLPSDI 123
HLVLL+ +FLL C LC+ SD+
Sbjct: 1030 HLVLLIHLFLLSIACCVDLCMRFTSDV 1056
>10_03_0033 -
7248131-7248711,7248947-7249079,7249470-7249994,
7250545-7250764,7250913-7251145
Length = 563
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -1
Query: 418 PHSLRGRDSWTPEGSHHTQTTLRGH 344
P SL G W P GS ++ +RGH
Sbjct: 74 PGSLGGMRGWVPPGSSSSEGRVRGH 98
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,012,541
Number of Sequences: 37544
Number of extensions: 376321
Number of successful extensions: 807
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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