Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060306.seq
(687 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U89278-1|AAC51170.1| 433|Homo sapiens polyhomeotic 2 homolog pr... 30 6.7
BC130630-1|AAI30631.1| 830|Homo sapiens PHC2 protein protein. 30 6.7
BC110863-1|AAI10864.2| 323|Homo sapiens polyhomeotic homolog 2 ... 30 6.7
BC092492-1|AAH92492.1| 405|Homo sapiens PHC2 protein protein. 30 6.7
BC068573-1|AAH68573.1| 405|Homo sapiens PHC2 protein protein. 30 6.7
BC029269-1|AAH29269.1| 323|Homo sapiens polyhomeotic homolog 2 ... 30 6.7
BC028396-1|AAH28396.3| 323|Homo sapiens polyhomeotic homolog 2 ... 30 6.7
AL513327-5|CAI13957.1| 858|Homo sapiens polyhomeotic homolog 2 ... 30 6.7
AL513327-4|CAI13956.1| 464|Homo sapiens polyhomeotic homolog 2 ... 30 6.7
AL513327-3|CAI13955.1| 323|Homo sapiens polyhomeotic homolog 2 ... 30 6.7
AK128821-1|BAC87622.1| 267|Homo sapiens protein ( Homo sapiens ... 30 6.7
AJ419231-1|CAD11673.1| 858|Homo sapiens polyhomeotic 2 protein. 30 6.7
>U89278-1|AAC51170.1| 433|Homo sapiens polyhomeotic 2 homolog
protein.
Length = 433
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 GCVNTRXXAGR*PAGLPRQDHFNTLHTSSSDTY---SLHSGTQFRKHC--*SAVY*SPGH 486
G + + G P LP+QDH T + + Y S G + C V +
Sbjct: 172 GNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKF 231
Query: 487 KRSRRFCNRYANVFYRTSRGCTSNITL 567
KRS+RFC+ Y GCT + L
Sbjct: 232 KRSKRFCSMACAKRYNV--GCTKRVGL 256
>BC130630-1|AAI30631.1| 830|Homo sapiens PHC2 protein protein.
Length = 830
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 GCVNTRXXAGR*PAGLPRQDHFNTLHTSSSDTY---SLHSGTQFRKHC--*SAVY*SPGH 486
G + + G P LP+QDH T + + Y S G + C V +
Sbjct: 567 GNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKF 626
Query: 487 KRSRRFCNRYANVFYRTSRGCTSNITL 567
KRS+RFC+ Y GCT + L
Sbjct: 627 KRSKRFCSMACAKRYNV--GCTKRVGL 651
>BC110863-1|AAI10864.2| 323|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 323
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 GCVNTRXXAGR*PAGLPRQDHFNTLHTSSSDTY---SLHSGTQFRKHC--*SAVY*SPGH 486
G + + G P LP+QDH T + + Y S G + C V +
Sbjct: 60 GNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKF 119
Query: 487 KRSRRFCNRYANVFYRTSRGCTSNITL 567
KRS+RFC+ Y GCT + L
Sbjct: 120 KRSKRFCSMACAKRYNV--GCTKRVGL 144
>BC092492-1|AAH92492.1| 405|Homo sapiens PHC2 protein protein.
Length = 405
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 GCVNTRXXAGR*PAGLPRQDHFNTLHTSSSDTY---SLHSGTQFRKHC--*SAVY*SPGH 486
G + + G P LP+QDH T + + Y S G + C V +
Sbjct: 142 GNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKF 201
Query: 487 KRSRRFCNRYANVFYRTSRGCTSNITL 567
KRS+RFC+ Y GCT + L
Sbjct: 202 KRSKRFCSMACAKRYNV--GCTKRVGL 226
>BC068573-1|AAH68573.1| 405|Homo sapiens PHC2 protein protein.
Length = 405
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 GCVNTRXXAGR*PAGLPRQDHFNTLHTSSSDTY---SLHSGTQFRKHC--*SAVY*SPGH 486
G + + G P LP+QDH T + + Y S G + C V +
Sbjct: 142 GNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKF 201
Query: 487 KRSRRFCNRYANVFYRTSRGCTSNITL 567
KRS+RFC+ Y GCT + L
Sbjct: 202 KRSKRFCSMACAKRYNV--GCTKRVGL 226
>BC029269-1|AAH29269.1| 323|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 323
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 GCVNTRXXAGR*PAGLPRQDHFNTLHTSSSDTY---SLHSGTQFRKHC--*SAVY*SPGH 486
G + + G P LP+QDH T + + Y S G + C V +
Sbjct: 60 GNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKF 119
Query: 487 KRSRRFCNRYANVFYRTSRGCTSNITL 567
KRS+RFC+ Y GCT + L
Sbjct: 120 KRSKRFCSMACAKRYNV--GCTKRVGL 144
>BC028396-1|AAH28396.3| 323|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 323
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 GCVNTRXXAGR*PAGLPRQDHFNTLHTSSSDTY---SLHSGTQFRKHC--*SAVY*SPGH 486
G + + G P LP+QDH T + + Y S G + C V +
Sbjct: 60 GNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKF 119
Query: 487 KRSRRFCNRYANVFYRTSRGCTSNITL 567
KRS+RFC+ Y GCT + L
Sbjct: 120 KRSKRFCSMACAKRYNV--GCTKRVGL 144
>AL513327-5|CAI13957.1| 858|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 858
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 GCVNTRXXAGR*PAGLPRQDHFNTLHTSSSDTY---SLHSGTQFRKHC--*SAVY*SPGH 486
G + + G P LP+QDH T + + Y S G + C V +
Sbjct: 595 GNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKF 654
Query: 487 KRSRRFCNRYANVFYRTSRGCTSNITL 567
KRS+RFC+ Y GCT + L
Sbjct: 655 KRSKRFCSMACAKRYNV--GCTKRVGL 679
>AL513327-4|CAI13956.1| 464|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 464
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 GCVNTRXXAGR*PAGLPRQDHFNTLHTSSSDTY---SLHSGTQFRKHC--*SAVY*SPGH 486
G + + G P LP+QDH T + + Y S G + C V +
Sbjct: 201 GNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKF 260
Query: 487 KRSRRFCNRYANVFYRTSRGCTSNITL 567
KRS+RFC+ Y GCT + L
Sbjct: 261 KRSKRFCSMACAKRYNV--GCTKRVGL 285
>AL513327-3|CAI13955.1| 323|Homo sapiens polyhomeotic homolog 2
(Drosophila) protein.
Length = 323
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 GCVNTRXXAGR*PAGLPRQDHFNTLHTSSSDTY---SLHSGTQFRKHC--*SAVY*SPGH 486
G + + G P LP+QDH T + + Y S G + C V +
Sbjct: 60 GNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKF 119
Query: 487 KRSRRFCNRYANVFYRTSRGCTSNITL 567
KRS+RFC+ Y GCT + L
Sbjct: 120 KRSKRFCSMACAKRYNV--GCTKRVGL 144
>AK128821-1|BAC87622.1| 267|Homo sapiens protein ( Homo sapiens
cDNA FLJ46105 fis, clone TESTI2026024, highly similar
to Mus musculus early development regulator 2,
polyhomeotic 2 protein. ).
Length = 267
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 GCVNTRXXAGR*PAGLPRQDHFNTLHTSSSDTY---SLHSGTQFRKHC--*SAVY*SPGH 486
G + + G P LP+QDH T + + Y S G + C V +
Sbjct: 10 GNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKF 69
Query: 487 KRSRRFCNRYANVFYRTSRGCTSNITL 567
KRS+RFC+ Y GCT + L
Sbjct: 70 KRSKRFCSMACAKRYNV--GCTKRVGL 94
>AJ419231-1|CAD11673.1| 858|Homo sapiens polyhomeotic 2 protein.
Length = 858
Score = 30.3 bits (65), Expect = 6.7
Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 5/87 (5%)
Frame = +1
Query: 322 GCVNTRXXAGR*PAGLPRQDHFNTLHTSSSDTY---SLHSGTQFRKHC--*SAVY*SPGH 486
G + + G P LP+QDH T + + Y S G + C V +
Sbjct: 595 GNLKKKYAQGFLPEKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKF 654
Query: 487 KRSRRFCNRYANVFYRTSRGCTSNITL 567
KRS+RFC+ Y GCT + L
Sbjct: 655 KRSKRFCSMACAKRYNV--GCTKRVGL 679
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,963,493
Number of Sequences: 237096
Number of extensions: 2289848
Number of successful extensions: 3731
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3731
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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