Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060306.seq
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119114-1|AAM50974.1|  699|Drosophila melanogaster RE15216p pro...    31   1.1  
AE014296-3764|ABI31272.1|  309|Drosophila melanogaster CG41454-P...    31   1.1  
AE014296-3763|AAS64918.1|  699|Drosophila melanogaster CG33217-P...    31   1.1  
AY119613-1|AAM50267.1| 1000|Drosophila melanogaster LD42233p pro...    29   6.0  
AE014297-3016|AAF55899.2| 1000|Drosophila melanogaster CG7956-PA...    29   6.0  
AE014297-3015|AAX52970.2| 1122|Drosophila melanogaster CG7956-PB...    29   6.0  
AE014297-3014|ABI31191.1| 1192|Drosophila melanogaster CG7956-PC...    29   6.0  

>AY119114-1|AAM50974.1|  699|Drosophila melanogaster RE15216p
           protein.
          Length = 699

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
 Frame = +2

Query: 146 IISRIETLANNRPKI*ACISNEGPNKGSIYTHGPRR--CKMDSRDLCAMMVFDNDRHYQG 319
           +IS IET+ANN+        N G +  S+    P    CK DS+DL A     N      
Sbjct: 574 LISAIETIANNKDN----QKNPGYDNNSLNKKKPFEVVCKNDSKDLIAEDTPKNINEIPD 629

Query: 320 QDA*TQXXXQGDSLRACHVKITSTHSTLHHLIPTVCIQEHNL 445
               +      +SL+   ++I + ++   +LI + C  E ++
Sbjct: 630 GPLLSSKINSSESLQGQPLEILNGNNVNSNLISSCCSAEESV 671


>AE014296-3764|ABI31272.1|  309|Drosophila melanogaster CG41454-PA
           protein.
          Length = 309

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
 Frame = +2

Query: 146 IISRIETLANNRPKI*ACISNEGPNKGSIYTHGPRR--CKMDSRDLCAMMVFDNDRHYQG 319
           +IS IET+ANN+        N G +  S+    P    CK DS+DL A     N      
Sbjct: 121 LISAIETIANNKDN----QKNPGYDNNSLNKKKPFEVVCKNDSKDLIAEDTPKNINEIPD 176

Query: 320 QDA*TQXXXQGDSLRACHVKITSTHSTLHHLIPTVCIQEHNL 445
               +      +SL+   ++I + ++   +LI + C  E ++
Sbjct: 177 GPLLSSKINSSESLQGQPLEILNGNNVNSNLISSCCSAEESV 218


>AE014296-3763|AAS64918.1|  699|Drosophila melanogaster CG33217-PA
           protein.
          Length = 699

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
 Frame = +2

Query: 146 IISRIETLANNRPKI*ACISNEGPNKGSIYTHGPRR--CKMDSRDLCAMMVFDNDRHYQG 319
           +IS IET+ANN+        N G +  S+    P    CK DS+DL A     N      
Sbjct: 574 LISAIETIANNKDN----QKNPGYDNNSLNKKKPFEVVCKNDSKDLIAEDTPKNINEIPD 629

Query: 320 QDA*TQXXXQGDSLRACHVKITSTHSTLHHLIPTVCIQEHNL 445
               +      +SL+   ++I + ++   +LI + C  E ++
Sbjct: 630 GPLLSSKINSSESLQGQPLEILNGNNVNSNLISSCCSAEESV 671


>AY119613-1|AAM50267.1| 1000|Drosophila melanogaster LD42233p protein.
          Length = 1000

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +2

Query: 458  DQLCTSLQDIKDHEDSVIGMPTCSIEQAEAVRPI----LRCISSSE 583
            D L  S+  + DH    +G+PT  +E A A+RPI    L C+ + E
Sbjct: 927  DVLTISITSVTDH----VGLPTGLLENAPAIRPITPNPLICVEAHE 968


>AE014297-3016|AAF55899.2| 1000|Drosophila melanogaster CG7956-PA,
            isoform A protein.
          Length = 1000

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +2

Query: 458  DQLCTSLQDIKDHEDSVIGMPTCSIEQAEAVRPI----LRCISSSE 583
            D L  S+  + DH    +G+PT  +E A A+RPI    L C+ + E
Sbjct: 927  DVLTISITSVTDH----VGLPTGLLENAPAIRPITPNPLICVEAHE 968


>AE014297-3015|AAX52970.2| 1122|Drosophila melanogaster CG7956-PB,
            isoform B protein.
          Length = 1122

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +2

Query: 458  DQLCTSLQDIKDHEDSVIGMPTCSIEQAEAVRPI----LRCISSSE 583
            D L  S+  + DH    +G+PT  +E A A+RPI    L C+ + E
Sbjct: 1049 DVLTISITSVTDH----VGLPTGLLENAPAIRPITPNPLICVEAHE 1090


>AE014297-3014|ABI31191.1| 1192|Drosophila melanogaster CG7956-PC,
            isoform C protein.
          Length = 1192

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
 Frame = +2

Query: 458  DQLCTSLQDIKDHEDSVIGMPTCSIEQAEAVRPI----LRCISSSE 583
            D L  S+  + DH    +G+PT  +E A A+RPI    L C+ + E
Sbjct: 1049 DVLTISITSVTDH----VGLPTGLLENAPAIRPITPNPLICVEAHE 1090


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,697,380
Number of Sequences: 53049
Number of extensions: 696945
Number of successful extensions: 1638
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)