Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060305.seq
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    24   1.0  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   4.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.5  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   7.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/37 (24%), Positives = 17/37 (45%)
 Frame = -3

Query: 508 LLGHTIDSKVQIHHHLSQTLHCCKRCDMSDTLVFVVK 398
           +L   I+  +  + H    +  CK CD+   L  ++K
Sbjct: 191 ILNRYIEESISKYKHAELVMPLCKSCDLHHRLSKLIK 227



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 562 LIHFAQKT*-GQSEQQNTCLLGHTIDSKVQIHHHLSQ 455
           LI + QK   G  E + T    +T++    +HHHLS+
Sbjct: 478 LIEYFQKNKIGPVETKGTNKQLNTLNKICALHHHLSK 514


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/33 (27%), Positives = 13/33 (39%)
 Frame = +1

Query: 334 CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCH 432
           C  C+R  G      +  + H   +   CQ CH
Sbjct: 137 CEVCNRSFGYKHVLQNHERTHTGEKPFECQECH 169


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = -3

Query: 562 LIHFAQKT*-GQSEQQNTCLLGHTIDSKVQIHHHLSQ 455
           LI + QK   G  E + T    +T++    +HHHLS+
Sbjct: 203 LIEYFQKNKIGPVETKGTNKQLNTLNKICALHHHLSK 239


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 481 LYCRWCGQGDKYSVVLTVLMFFVRNVLNGILDNQ 582
           L C WCGQ  +    +T  M   ++  N I   Q
Sbjct: 479 LKCMWCGQSFRSLAEMTSHMQQTQHYTNIISQEQ 512


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 526 LTVLMFFVRNVLNGILDNQKY 588
           L  L+FFV  + + + +N KY
Sbjct: 4   LVPLLFFVIAIASSLAENSKY 24


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 675 NKPNIQHAGVLSIQDCT*NISNHQHI 598
           N  ++  A +LS +DC   +SN  H+
Sbjct: 80  NAAHLAAANILSPEDCELVLSNPTHM 105


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -1

Query: 675 NKPNIQHAGVLSIQDCT*NISNHQHI 598
           N  ++  A +LS +DC   +SN  H+
Sbjct: 80  NAAHLAAANILSPEDCELVLSNPTHM 105


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -2

Query: 563 FNTFRTKNMRTVRTTEYLSPWPHH 492
           FN+  T    +V T  Y SP P H
Sbjct: 307 FNSVATPTPTSVMTELYPSPVPGH 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,590
Number of Sequences: 336
Number of extensions: 3180
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)