Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060305.seq
         (693 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   5.2  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   5.2  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   6.9  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 480  TLLSMVWPRRQVFCCSDCPHVFCAKC 557
            T  ++ W   +   C  C  +FCA+C
Sbjct: 1813 TCQTVFWIGLRKHHCRSCGQIFCAEC 1838


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +3

Query: 480  TLLSMVWPRRQVFCCSDCPHVFCAKC 557
            T  ++ W   +   C  C  +FCA+C
Sbjct: 1814 TCQTVFWIGLRKHHCRSCGQIFCAEC 1839


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +2

Query: 194  SSDENVQFPPLPEPTDEDFQVI 259
            + +EN   PP P P  E+  ++
Sbjct: 1047 TENENYMVPPSPRPVSEELHLV 1068


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 652,588
Number of Sequences: 2352
Number of extensions: 11749
Number of successful extensions: 79
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)