Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060305.seq
(693 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 27 0.17
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 26 0.39
AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein ... 24 1.6
DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 22 4.8
AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 22 4.8
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 6.4
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 6.4
AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein. 21 8.4
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 8.4
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 8.4
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 27.1 bits (57), Expect = 0.17
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Frame = +1
Query: 334 CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTC-HIFYNSGEF---EKGDDGSELY-CRWC 498
C C+R S + ++IH R C C F SG+ + G + Y C+ C
Sbjct: 150 CDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKAC 209
Query: 499 GQGDKYSVVLTV 534
G+G S L V
Sbjct: 210 GKGFTCSKQLKV 221
Score = 25.4 bits (53), Expect = 0.52
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Frame = +1
Query: 316 TSQRLH-CTACDRHLGSSSRNLSRVKIHPLLRTLVCQTCHIFYNSGE----FEKGDDGSE 480
T +R H CT C + S + + ++ H + VC+ C + + + G +
Sbjct: 171 TGERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRTHTGEK 230
Query: 481 LY-CRWCGQGDKYSVVL 528
Y C CG+ Y+ VL
Sbjct: 231 PYTCDICGKSFGYNHVL 247
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 25.8 bits (54), Expect = 0.39
Identities = 9/33 (27%), Positives = 15/33 (45%)
Frame = +1
Query: 331 HCTACDRHLGSSSRNLSRVKIHPLLRTLVCQTC 429
HC+ CDR + +++H R C+ C
Sbjct: 39 HCSHCDRQFVQVANLRRHLRVHTGERPYACELC 71
>AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein
protein.
Length = 87
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 176 APEKPASSDENVQFPPLPEPTDED 247
A P S+ V FPP P P +ED
Sbjct: 38 AMRDPRSNRGPVLFPPGPPPNNED 61
>DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2
protein.
Length = 117
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 257 SPENLHQLVQVKAGIVHSHPKKPAFLVQ 174
SPE Q+ +V + I ++PK+ + +VQ
Sbjct: 84 SPEETRQIKKVLSHIQRTYPKEWSKIVQ 111
>AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein
protein.
Length = 117
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -2
Query: 257 SPENLHQLVQVKAGIVHSHPKKPAFLVQ 174
SPE Q+ +V + I ++PK+ + +VQ
Sbjct: 84 SPEETRQIKKVLSHIQRTYPKEWSKIVQ 111
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 293 LVLIYSFSSSLRSPENL 243
++ I+S S SLR+P N+
Sbjct: 78 VIWIFSTSKSLRTPSNM 94
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 293 LVLIYSFSSSLRSPENL 243
++ I+S S SLR+P N+
Sbjct: 78 VIWIFSTSKSLRTPSNM 94
>AJ849455-1|CAH60991.1| 366|Apis mellifera twist protein protein.
Length = 366
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 664 HTARRCFKHSGLHLKHFQSSTHLI 593
H+A +S H + F STHL+
Sbjct: 33 HSAESSASNSPDHYERFSPSTHLM 56
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 508 LLGHTIDSKVQIHHHLSQTLH 446
LL H+++ QIH + +T+H
Sbjct: 193 LLVHSLEFSDQIHGYRCRTMH 213
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 8.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -3
Query: 508 LLGHTIDSKVQIHHHLSQTLH 446
LL H+++ QIH + +T+H
Sbjct: 193 LLVHSLEFSDQIHGYRCRTMH 213
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,695
Number of Sequences: 438
Number of extensions: 3813
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21195810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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