Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060304.seq
         (631 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        26   1.1  
AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease pr...    25   1.5  
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      25   2.0  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    23   8.0  

>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 209 QTEAQSSHWCRRHGD 165
           QT +Q++HW + HGD
Sbjct: 222 QTLSQANHWLKSHGD 236


>AJ276486-1|CAB90818.1|  364|Anopheles gambiae serine protease
           protein.
          Length = 364

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 618 RRPLPRQCCPLYKNKNKTCNGRR 550
           ++P+P  CCP + N + TC  ++
Sbjct: 81  KKPIPLLCCPKFSN-SPTCGAQQ 102


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 397 KHTETCEKNPLPTKDVIEQEXS 462
           K+T TCE   LP +DV+  + S
Sbjct: 477 KNTTTCEDYALPYQDVVPSDPS 498


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 9/34 (26%), Positives = 20/34 (58%)
 Frame = +1

Query: 244 FIRRIEKFDSSQLKHTETQEKNPLPDKDAIEAEK 345
           F RR++KF+   +K  +  ++N   +++ +E  K
Sbjct: 288 FTRRVDKFEKCVVKRRQLMKQN---EREVVEKSK 318


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 623,655
Number of Sequences: 2352
Number of extensions: 12507
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)