Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060303.seq
(693 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13092-1|CAA73533.1| 939|Drosophila melanogaster alpha-adaptin ... 190 1e-48
Y11104-1|CAA71991.1| 940|Drosophila melanogaster alpha-adaptin ... 190 1e-48
BT003458-1|AAO39461.1| 799|Drosophila melanogaster RH30202p pro... 190 1e-48
AE014134-99|AAS64634.1| 952|Drosophila melanogaster CG4260-PB, ... 190 1e-48
AE014134-98|AAF56103.2| 940|Drosophila melanogaster CG4260-PA, ... 190 1e-48
BT023757-1|AAZ41765.1| 976|Drosophila melanogaster RE56180p pro... 57 3e-08
AE014298-1280|AAF46446.2| 963|Drosophila melanogaster CG9113-PA... 57 3e-08
AE014298-1279|AAS65301.1| 969|Drosophila melanogaster CG9113-PE... 57 3e-08
AE014298-1278|AAO41643.2| 969|Drosophila melanogaster CG9113-PC... 57 3e-08
AE014298-1277|AAN09243.2| 976|Drosophila melanogaster CG9113-PB... 57 3e-08
AE014298-1276|AAO41644.2| 982|Drosophila melanogaster CG9113-PD... 57 3e-08
U31351-1|AAB97618.1| 810|Drosophila melanogaster protein ( Dros... 51 1e-06
AF002164-1|AAC14585.1| 1034|Drosophila melanogaster AP-3 delta-a... 51 1e-06
AE014298-1950|AAF48307.2| 1034|Drosophila melanogaster CG10986-P... 51 1e-06
AF044287-1|AAC01743.1| 810|Drosophila melanogaster delta adapti... 50 3e-06
BT011188-1|AAR88549.1| 1034|Drosophila melanogaster RE06749p pro... 50 4e-06
>Y13092-1|CAA73533.1| 939|Drosophila melanogaster alpha-adaptin
protein.
Length = 939
Score = 190 bits (464), Expect = 1e-48
Identities = 97/112 (86%), Positives = 100/112 (89%)
Frame = +1
Query: 256 HLATSEFSHEAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLAYLE 435
HLATSEFSHE VKKHQE+VILSMKMEKDVSVRQ AVDLLYAMCD+ NAEEIVQEML YLE
Sbjct: 355 HLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLE 414
Query: 436 TADYSIREEMVVKVAILAEKYATDSLGMWDVIPNPIRIAGDYVSEEVXYRVI 591
TADYSIREEMV+KVAILAEKYATD DVI N IRIAGDYVSEEV YRVI
Sbjct: 415 TADYSIREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVI 466
Score = 153 bits (370), Expect = 3e-37
Identities = 74/83 (89%), Positives = 77/83 (92%)
Frame = +2
Query: 5 TREPGVRGRLSECLETIFNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHNDSEPNLLVRA 184
T E GVR RL+E LETI NKAQEPPKSKKVQHSNAKNAVLFEAI+LIIH+DSEP LLVRA
Sbjct: 271 TEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAKNAVLFEAINLIIHSDSEPELLVRA 330
Query: 185 CNQLGQFLSNRETNLRYLALESM 253
CNQLGQFLSNRETNLRYLALESM
Sbjct: 331 CNQLGQFLSNRETNLRYLALESM 353
Score = 38.3 bits (85), Expect = 0.010
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +2
Query: 593 QIVINRDEVQAYAAKTVFGSITSP 664
QIVINR+EVQ YAAKTVF ++ P
Sbjct: 467 QIVINREEVQGYAAKTVFEALQPP 490
>Y11104-1|CAA71991.1| 940|Drosophila melanogaster alpha-adaptin
protein.
Length = 940
Score = 190 bits (464), Expect = 1e-48
Identities = 97/112 (86%), Positives = 100/112 (89%)
Frame = +1
Query: 256 HLATSEFSHEAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLAYLE 435
HLATSEFSHE VKKHQE+VILSMKMEKDVSVRQ AVDLLYAMCD+ NAEEIVQEML YLE
Sbjct: 355 HLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLE 414
Query: 436 TADYSIREEMVVKVAILAEKYATDSLGMWDVIPNPIRIAGDYVSEEVXYRVI 591
TADYSIREEMV+KVAILAEKYATD DVI N IRIAGDYVSEEV YRVI
Sbjct: 415 TADYSIREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVI 466
Score = 155 bits (376), Expect = 5e-38
Identities = 75/83 (90%), Positives = 78/83 (93%)
Frame = +2
Query: 5 TREPGVRGRLSECLETIFNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHNDSEPNLLVRA 184
T E GVR RL+E LETI NKAQEPPKSKKVQHSNAKNAVLFEAI+LIIH+DSEPNLLVRA
Sbjct: 271 TEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAKNAVLFEAINLIIHSDSEPNLLVRA 330
Query: 185 CNQLGQFLSNRETNLRYLALESM 253
CNQLGQFLSNRETNLRYLALESM
Sbjct: 331 CNQLGQFLSNRETNLRYLALESM 353
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2
Query: 593 QIVINRDEVQAYAAKTVFGSITSP 664
QIVINR+EVQ YAAKTVF ++ +P
Sbjct: 467 QIVINREEVQGYAAKTVFEALQAP 490
>BT003458-1|AAO39461.1| 799|Drosophila melanogaster RH30202p
protein.
Length = 799
Score = 190 bits (464), Expect = 1e-48
Identities = 97/112 (86%), Positives = 100/112 (89%)
Frame = +1
Query: 256 HLATSEFSHEAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLAYLE 435
HLATSEFSHE VKKHQE+VILSMKMEKDVSVRQ AVDLLYAMCD+ NAEEIVQEML YLE
Sbjct: 214 HLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLE 273
Query: 436 TADYSIREEMVVKVAILAEKYATDSLGMWDVIPNPIRIAGDYVSEEVXYRVI 591
TADYSIREEMV+KVAILAEKYATD DVI N IRIAGDYVSEEV YRVI
Sbjct: 274 TADYSIREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVI 325
Score = 155 bits (376), Expect = 5e-38
Identities = 75/83 (90%), Positives = 78/83 (93%)
Frame = +2
Query: 5 TREPGVRGRLSECLETIFNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHNDSEPNLLVRA 184
T E GVR RL+E LETI NKAQEPPKSKKVQHSNAKNAVLFEAI+LIIH+DSEPNLLVRA
Sbjct: 130 TEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAKNAVLFEAINLIIHSDSEPNLLVRA 189
Query: 185 CNQLGQFLSNRETNLRYLALESM 253
CNQLGQFLSNRETNLRYLALESM
Sbjct: 190 CNQLGQFLSNRETNLRYLALESM 212
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2
Query: 593 QIVINRDEVQAYAAKTVFGSITSP 664
QIVINR+EVQ YAAKTVF ++ +P
Sbjct: 326 QIVINREEVQGYAAKTVFEALQAP 349
>AE014134-99|AAS64634.1| 952|Drosophila melanogaster CG4260-PB,
isoform B protein.
Length = 952
Score = 190 bits (464), Expect = 1e-48
Identities = 97/112 (86%), Positives = 100/112 (89%)
Frame = +1
Query: 256 HLATSEFSHEAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLAYLE 435
HLATSEFSHE VKKHQE+VILSMKMEKDVSVRQ AVDLLYAMCD+ NAEEIVQEML YLE
Sbjct: 367 HLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLE 426
Query: 436 TADYSIREEMVVKVAILAEKYATDSLGMWDVIPNPIRIAGDYVSEEVXYRVI 591
TADYSIREEMV+KVAILAEKYATD DVI N IRIAGDYVSEEV YRVI
Sbjct: 427 TADYSIREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVI 478
Score = 155 bits (376), Expect = 5e-38
Identities = 75/83 (90%), Positives = 78/83 (93%)
Frame = +2
Query: 5 TREPGVRGRLSECLETIFNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHNDSEPNLLVRA 184
T E GVR RL+E LETI NKAQEPPKSKKVQHSNAKNAVLFEAI+LIIH+DSEPNLLVRA
Sbjct: 283 TEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAKNAVLFEAINLIIHSDSEPNLLVRA 342
Query: 185 CNQLGQFLSNRETNLRYLALESM 253
CNQLGQFLSNRETNLRYLALESM
Sbjct: 343 CNQLGQFLSNRETNLRYLALESM 365
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2
Query: 593 QIVINRDEVQAYAAKTVFGSITSP 664
QIVINR+EVQ YAAKTVF ++ +P
Sbjct: 479 QIVINREEVQGYAAKTVFEALQAP 502
>AE014134-98|AAF56103.2| 940|Drosophila melanogaster CG4260-PA,
isoform A protein.
Length = 940
Score = 190 bits (464), Expect = 1e-48
Identities = 97/112 (86%), Positives = 100/112 (89%)
Frame = +1
Query: 256 HLATSEFSHEAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLAYLE 435
HLATSEFSHE VKKHQE+VILSMKMEKDVSVRQ AVDLLYAMCD+ NAEEIVQEML YLE
Sbjct: 355 HLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLE 414
Query: 436 TADYSIREEMVVKVAILAEKYATDSLGMWDVIPNPIRIAGDYVSEEVXYRVI 591
TADYSIREEMV+KVAILAEKYATD DVI N IRIAGDYVSEEV YRVI
Sbjct: 415 TADYSIREEMVLKVAILAEKYATDYTWYVDVILNLIRIAGDYVSEEVWYRVI 466
Score = 155 bits (376), Expect = 5e-38
Identities = 75/83 (90%), Positives = 78/83 (93%)
Frame = +2
Query: 5 TREPGVRGRLSECLETIFNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHNDSEPNLLVRA 184
T E GVR RL+E LETI NKAQEPPKSKKVQHSNAKNAVLFEAI+LIIH+DSEPNLLVRA
Sbjct: 271 TEEAGVRARLNETLETILNKAQEPPKSKKVQHSNAKNAVLFEAINLIIHSDSEPNLLVRA 330
Query: 185 CNQLGQFLSNRETNLRYLALESM 253
CNQLGQFLSNRETNLRYLALESM
Sbjct: 331 CNQLGQFLSNRETNLRYLALESM 353
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2
Query: 593 QIVINRDEVQAYAAKTVFGSITSP 664
QIVINR+EVQ YAAKTVF ++ +P
Sbjct: 467 QIVINREEVQGYAAKTVFEALQAP 490
>BT023757-1|AAZ41765.1| 976|Drosophila melanogaster RE56180p
protein.
Length = 976
Score = 56.8 bits (131), Expect = 3e-08
Identities = 30/110 (27%), Positives = 62/110 (56%)
Frame = +1
Query: 247 INVHLATSEFSHEAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLA 426
+N L T AV++H+ ++ +K + DVS+R++A++L +A+ + N + +E+L
Sbjct: 370 LNTLLRTVHADTSAVQRHRTTILECLK-DPDVSIRRRAMELSFALINAQNIRTMTKELLL 428
Query: 427 YLETADYSIREEMVVKVAILAEKYATDSLGMWDVIPNPIRIAGDYVSEEV 576
+LE AD + + + + AE+Y+ + D + + AG+YV ++V
Sbjct: 429 FLEKADAEFKAQCSSGMILAAERYSPTTRWHLDTQLSVLIAAGNYVRDDV 478
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 104 NAKNAVLFEAISLIIHNDSEPNLLVRACNQLGQFLSNRETNLRYLALESMFI*LH 268
N N +L+E + I+ SE L V A N LG+FL N + N+RY+AL ++ +H
Sbjct: 324 NVGNTILYETVLSIMDIRSEGGLRVLAVNILGRFLLNSDKNIRYVALNTLLRTVH 378
>AE014298-1280|AAF46446.2| 963|Drosophila melanogaster CG9113-PA,
isoform A protein.
Length = 963
Score = 56.8 bits (131), Expect = 3e-08
Identities = 30/110 (27%), Positives = 62/110 (56%)
Frame = +1
Query: 247 INVHLATSEFSHEAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLA 426
+N L T AV++H+ ++ +K + DVS+R++A++L +A+ + N + +E+L
Sbjct: 357 LNTLLRTVHADTSAVQRHRTTILECLK-DPDVSIRRRAMELSFALINAQNIRTMTKELLL 415
Query: 427 YLETADYSIREEMVVKVAILAEKYATDSLGMWDVIPNPIRIAGDYVSEEV 576
+LE AD + + + + AE+Y+ + D + + AG+YV ++V
Sbjct: 416 FLEKADAEFKAQCSSGMILAAERYSPTTRWHLDTQLSVLIAAGNYVRDDV 465
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 104 NAKNAVLFEAISLIIHNDSEPNLLVRACNQLGQFLSNRETNLRYLALESMFI*LH 268
N N +L+E + I+ SE L V A N LG+FL N + N+RY+AL ++ +H
Sbjct: 311 NVGNTILYETVLSIMDIRSEGGLRVLAVNILGRFLLNSDKNIRYVALNTLLRTVH 365
>AE014298-1279|AAS65301.1| 969|Drosophila melanogaster CG9113-PE,
isoform E protein.
Length = 969
Score = 56.8 bits (131), Expect = 3e-08
Identities = 30/110 (27%), Positives = 62/110 (56%)
Frame = +1
Query: 247 INVHLATSEFSHEAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLA 426
+N L T AV++H+ ++ +K + DVS+R++A++L +A+ + N + +E+L
Sbjct: 363 LNTLLRTVHADTSAVQRHRTTILECLK-DPDVSIRRRAMELSFALINAQNIRTMTKELLL 421
Query: 427 YLETADYSIREEMVVKVAILAEKYATDSLGMWDVIPNPIRIAGDYVSEEV 576
+LE AD + + + + AE+Y+ + D + + AG+YV ++V
Sbjct: 422 FLEKADAEFKAQCSSGMILAAERYSPTTRWHLDTQLSVLIAAGNYVRDDV 471
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 104 NAKNAVLFEAISLIIHNDSEPNLLVRACNQLGQFLSNRETNLRYLALESMFI*LH 268
N N +L+E + I+ SE L V A N LG+FL N + N+RY+AL ++ +H
Sbjct: 317 NVGNTILYETVLSIMDIRSEGGLRVLAVNILGRFLLNSDKNIRYVALNTLLRTVH 371
>AE014298-1278|AAO41643.2| 969|Drosophila melanogaster CG9113-PC,
isoform C protein.
Length = 969
Score = 56.8 bits (131), Expect = 3e-08
Identities = 30/110 (27%), Positives = 62/110 (56%)
Frame = +1
Query: 247 INVHLATSEFSHEAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLA 426
+N L T AV++H+ ++ +K + DVS+R++A++L +A+ + N + +E+L
Sbjct: 363 LNTLLRTVHADTSAVQRHRTTILECLK-DPDVSIRRRAMELSFALINAQNIRTMTKELLL 421
Query: 427 YLETADYSIREEMVVKVAILAEKYATDSLGMWDVIPNPIRIAGDYVSEEV 576
+LE AD + + + + AE+Y+ + D + + AG+YV ++V
Sbjct: 422 FLEKADAEFKAQCSSGMILAAERYSPTTRWHLDTQLSVLIAAGNYVRDDV 471
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 104 NAKNAVLFEAISLIIHNDSEPNLLVRACNQLGQFLSNRETNLRYLALESMFI*LH 268
N N +L+E + I+ SE L V A N LG+FL N + N+RY+AL ++ +H
Sbjct: 317 NVGNTILYETVLSIMDIRSEGGLRVLAVNILGRFLLNSDKNIRYVALNTLLRTVH 371
>AE014298-1277|AAN09243.2| 976|Drosophila melanogaster CG9113-PB,
isoform B protein.
Length = 976
Score = 56.8 bits (131), Expect = 3e-08
Identities = 30/110 (27%), Positives = 62/110 (56%)
Frame = +1
Query: 247 INVHLATSEFSHEAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLA 426
+N L T AV++H+ ++ +K + DVS+R++A++L +A+ + N + +E+L
Sbjct: 370 LNTLLRTVHADTSAVQRHRTTILECLK-DPDVSIRRRAMELSFALINAQNIRTMTKELLL 428
Query: 427 YLETADYSIREEMVVKVAILAEKYATDSLGMWDVIPNPIRIAGDYVSEEV 576
+LE AD + + + + AE+Y+ + D + + AG+YV ++V
Sbjct: 429 FLEKADAEFKAQCSSGMILAAERYSPTTRWHLDTQLSVLIAAGNYVRDDV 478
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 104 NAKNAVLFEAISLIIHNDSEPNLLVRACNQLGQFLSNRETNLRYLALESMFI*LH 268
N N +L+E + I+ SE L V A N LG+FL N + N+RY+AL ++ +H
Sbjct: 324 NVGNTILYETVLSIMDIRSEGGLRVLAVNILGRFLLNSDKNIRYVALNTLLRTVH 378
>AE014298-1276|AAO41644.2| 982|Drosophila melanogaster CG9113-PD,
isoform D protein.
Length = 982
Score = 56.8 bits (131), Expect = 3e-08
Identities = 30/110 (27%), Positives = 62/110 (56%)
Frame = +1
Query: 247 INVHLATSEFSHEAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLA 426
+N L T AV++H+ ++ +K + DVS+R++A++L +A+ + N + +E+L
Sbjct: 376 LNTLLRTVHADTSAVQRHRTTILECLK-DPDVSIRRRAMELSFALINAQNIRTMTKELLL 434
Query: 427 YLETADYSIREEMVVKVAILAEKYATDSLGMWDVIPNPIRIAGDYVSEEV 576
+LE AD + + + + AE+Y+ + D + + AG+YV ++V
Sbjct: 435 FLEKADAEFKAQCSSGMILAAERYSPTTRWHLDTQLSVLIAAGNYVRDDV 484
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +2
Query: 104 NAKNAVLFEAISLIIHNDSEPNLLVRACNQLGQFLSNRETNLRYLALESMFI*LH 268
N N +L+E + I+ SE L V A N LG+FL N + N+RY+AL ++ +H
Sbjct: 330 NVGNTILYETVLSIMDIRSEGGLRVLAVNILGRFLLNSDKNIRYVALNTLLRTVH 384
>U31351-1|AAB97618.1| 810|Drosophila melanogaster protein (
Drosophila melanogastergarnet mRNA, complete cds. ).
Length = 810
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/66 (37%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +1
Query: 283 EAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLAYLETADYS-IRE 459
++V+ H+++++ + +KD S+R +A+DLLY M K N EIV+ +L ++E A+ S R+
Sbjct: 271 KSVQAHKDLILACLD-DKDESIRLRALDLLYGMVSKKNLMEIVKRLLGHMERAEGSAYRD 329
Query: 460 EMVVKV 477
E++ KV
Sbjct: 330 ELLYKV 335
>AF002164-1|AAC14585.1| 1034|Drosophila melanogaster AP-3
delta-adaptin subunit protein.
Length = 1034
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/66 (37%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +1
Query: 283 EAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLAYLETADYS-IRE 459
++V+ H+++++ + +KD S+R +A+DLLY M K N EIV+ +L ++E A+ S R+
Sbjct: 337 KSVQAHKDLILACLD-DKDESIRLRALDLLYGMVSKKNLMEIVKRLLGHMERAEGSAYRD 395
Query: 460 EMVVKV 477
E++ KV
Sbjct: 396 ELLYKV 401
>AE014298-1950|AAF48307.2| 1034|Drosophila melanogaster CG10986-PB
protein.
Length = 1034
Score = 51.2 bits (117), Expect = 1e-06
Identities = 25/66 (37%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +1
Query: 283 EAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLAYLETADYS-IRE 459
++V+ H+++++ + +KD S+R +A+DLLY M K N EIV+ +L ++E A+ S R+
Sbjct: 337 KSVQAHKDLILACLD-DKDESIRLRALDLLYGMVSKKNLMEIVKRLLGHMERAEGSAYRD 395
Query: 460 EMVVKV 477
E++ KV
Sbjct: 396 ELLYKV 401
>AF044287-1|AAC01743.1| 810|Drosophila melanogaster delta adaptin
subunit of AP-3 protein.
Length = 810
Score = 50.0 bits (114), Expect = 3e-06
Identities = 25/66 (37%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Frame = +1
Query: 283 EAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLAYLETADYS-IRE 459
++V+ H+++++ + +KD S+R +A+DLLY M K N EIV+ +L ++E A+ S R
Sbjct: 271 KSVQAHKDLILACLD-DKDESIRLRALDLLYGMVSKKNLMEIVKRLLGHMERAEGSAYRT 329
Query: 460 EMVVKV 477
E++ KV
Sbjct: 330 ELLYKV 335
>BT011188-1|AAR88549.1| 1034|Drosophila melanogaster RE06749p
protein.
Length = 1034
Score = 49.6 bits (113), Expect = 4e-06
Identities = 24/66 (36%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +1
Query: 283 EAVKKHQEIVILSMKMEKDVSVRQQAVDLLYAMCDKTNAEEIVQEMLAYLETADYS-IRE 459
++V+ H+++++ + ++D S+R +A+DLLY M K N EIV+ +L ++E A+ S R+
Sbjct: 337 KSVQAHKDLILACLD-DEDESIRLRALDLLYGMVSKKNLMEIVKRLLGHMERAEGSAYRD 395
Query: 460 EMVVKV 477
E++ KV
Sbjct: 396 ELLYKV 401
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,854,361
Number of Sequences: 53049
Number of extensions: 441380
Number of successful extensions: 952
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -