Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060301.seq
(695 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 40 0.002
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 40 0.002
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 38 0.007
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 38 0.007
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 38 0.007
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 38 0.007
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 38 0.007
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 38 0.007
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 37 0.016
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 37 0.016
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 33 0.15
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 33 0.15
Z92972-6|CAB07485.1| 153|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 2.4
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 2.4
U80446-6|AAB37805.2| 783|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL132952-13|CAB61154.2| 283|Caenorhabditis elegans Hypothetical... 28 7.3
Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical pr... 27 9.7
Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical pr... 27 9.7
AC024761-10|AAP13759.1| 501|Caenorhabditis elegans Cop-9 signal... 27 9.7
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Frame = +2
Query: 230 FILCNHQVPAKFCNELD-KKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSL--GIPDD 400
F + + F N L +++V SPLS +L+L+ G + +++ +L G D+
Sbjct: 2 FDVAERRFALNFLNTLPVHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDE 61
Query: 401 DTIRXXXXXXXXXXXXIKGVTFNVANKIYIKEGDYESTQNLRRTLSRY 544
+ KGV +ANK+Y+K+G + L L Y
Sbjct: 62 QLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNY 109
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Frame = +2
Query: 230 FILCNHQVPAKFCNELD-KKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSL--GIPDD 400
F + + F N L +++V SPLS +L+L+ G + +++ +L G D+
Sbjct: 2 FDVAERRFALNFLNTLPVHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDE 61
Query: 401 DTIRXXXXXXXXXXXXIKGVTFNVANKIYIKEGDYESTQNLRRTLSRY 544
+ KGV +ANK+Y+K+G + L L Y
Sbjct: 62 QLVEHFSFVSKEVKNGTKGVEVYLANKVYLKKGFTVNPTFLSTALKNY 109
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 529 DAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSLDS 672
D ++++A ++FDN A A IN +V T + IK ++ DS++S
Sbjct: 105 DVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 529 DAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSLDS 672
D ++++A ++FDN A A IN +V T + IK ++ DS++S
Sbjct: 105 DVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 529 DAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSLDS 672
D ++++A ++FDN A A IN +V T + IK ++ DS++S
Sbjct: 105 DVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 529 DAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSLDS 672
D ++++A ++FDN A A IN +V T + IK ++ DS++S
Sbjct: 105 DVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 529 DAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSLDS 672
D ++++A ++FDN A A IN +V T + IK ++ DS++S
Sbjct: 105 DVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +1
Query: 529 DAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSLDS 672
D ++++A ++FDN A A IN +V T + IK ++ DS++S
Sbjct: 105 DVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINS 152
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 538 EVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSLDS 672
+++ A E ++F AA +N +VEN TN +IKDL+ DS ++
Sbjct: 104 KLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANN 148
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/45 (37%), Positives = 28/45 (62%)
Frame = +1
Query: 538 EVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSLDS 672
+++ A E ++F AA +N +VEN TN +IKDL+ DS ++
Sbjct: 104 KLYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANN 148
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +1
Query: 529 DAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSL 666
D ++++A ++NF++ A+A IN +V T IK +++ DS+
Sbjct: 114 DVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSI 159
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/46 (30%), Positives = 28/46 (60%)
Frame = +1
Query: 529 DAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSL 666
D ++++A ++NF++ A+A IN +V T IK +++ DS+
Sbjct: 114 DVKKLYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSI 159
>Z92972-6|CAB07485.1| 153|Caenorhabditis elegans Hypothetical
protein T19C9.6 protein.
Length = 153
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +1
Query: 529 DAVEVFDADFEKVNF--DNGAAAAGLINKWVENKTNER 636
D V FD+ K+N DNG G + KWV+ K +R
Sbjct: 103 DEVFFFDSTGGKINLVADNGLVQFGFVVKWVQCKLKDR 140
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = -3
Query: 480 LLATLNVTPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGD 301
++A TP I T E+ + SSS I ++SSS GS V + ++D+ D
Sbjct: 384 MIAVSTTTPMISL----TTESMQSTTSSSEISTTLDSSSTTGS----VSSTESVTSDSSD 435
Query: 300 DTTFFFLSSS 271
TT +SSS
Sbjct: 436 STTPLDVSSS 445
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = -3
Query: 480 LLATLNVTPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGD 301
++A TP I T E+ + SSS I ++SSS GS V + ++D+ D
Sbjct: 384 MIAVSTTTPMISL----TTESMQSTTSSSEISTTLDSSSTTGS----VSSTESVTSDSSD 435
Query: 300 DTTFFFLSSS 271
TT +SSS
Sbjct: 436 STTPLDVSSS 445
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = -3
Query: 480 LLATLNVTPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGD 301
++A TP I T E+ + SSS I ++SSS GS V + ++D+ D
Sbjct: 384 MIAVSTTTPMISL----TTESMQSTTSSSEISTTLDSSSTTGS----VSSTESVTSDSSD 435
Query: 300 DTTFFFLSSS 271
TT +SSS
Sbjct: 436 STTPLDVSSS 445
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/70 (32%), Positives = 34/70 (48%)
Frame = -3
Query: 480 LLATLNVTPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGD 301
++A TP I T E+ + SSS I ++SSS GS V + ++D+ D
Sbjct: 384 MIAVSTTTPMISL----TTESMQSTTSSSEISTTLDSSSTTGS----VSSTESVTSDSSD 435
Query: 300 DTTFFFLSSS 271
TT +SSS
Sbjct: 436 STTPLDVSSS 445
>U80446-6|AAB37805.2| 783|Caenorhabditis elegans Hypothetical
protein F56A3.1 protein.
Length = 783
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 605 FIRPAAAAPLSKLTFSKSASNTSTASFLSFGSTH 504
FI + PLS+LTF S S S +F FG H
Sbjct: 538 FIGFSDGLPLSELTFIASISRDSLFNFRRFGGAH 571
>AL132952-13|CAB61154.2| 283|Caenorhabditis elegans Hypothetical
protein Y51H4A.22 protein.
Length = 283
Score = 27.9 bits (59), Expect = 7.3
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -3
Query: 588 CGSVIEVNFFKICIEYL-DSVLLKFWVDS*SPSLMYILLATLNVTPFIDFNFDDTAENDE 412
CGS ++N FK + +S+ +K DS S+ Y + T T + F F+ T + DE
Sbjct: 107 CGSNEKLNSFKYSLYVAHESLKMKKIDDSVHDSVQYKVKDTPKDTLQVVFKFEQTTKKDE 166
Query: 411 R 409
+
Sbjct: 167 K 167
>Z73911-8|CAL64005.1| 367|Caenorhabditis elegans Hypothetical
protein T12A7.2b protein.
Length = 367
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +2
Query: 206 CSQY-GFKG--FILCNHQVPAKFCNELDKKKNVVSSPLSAEYL-LALITLG 346
C+ Y GF G +C+ VP C+E+ +K+ V+S L+ L +IT+G
Sbjct: 171 CACYEGFTGPACTICDGTVPTIQCDEVIRKRGSVNSRLTLSGLSFCIITIG 221
>Z73911-7|CAA98142.2| 483|Caenorhabditis elegans Hypothetical
protein T12A7.2a protein.
Length = 483
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +2
Query: 206 CSQY-GFKG--FILCNHQVPAKFCNELDKKKNVVSSPLSAEYL-LALITLG 346
C+ Y GF G +C+ VP C+E+ +K+ V+S L+ L +IT+G
Sbjct: 171 CACYEGFTGPACTICDGTVPTIQCDEVIRKRGSVNSRLTLSGLSFCIITIG 221
>AC024761-10|AAP13759.1| 501|Caenorhabditis elegans Cop-9
signalosome subunit protein 3 protein.
Length = 501
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 11 LHPTYIFSYLYNKGIFTINCKK 76
LHP Y+ YLYN I K+
Sbjct: 254 LHPKYVLDYLYNGACILIELKR 275
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,673,451
Number of Sequences: 27780
Number of extensions: 284734
Number of successful extensions: 729
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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