Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060301.seq
(695 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g64030.1 68414.m07252 serpin family protein / serine protease... 40 0.002
At2g14540.1 68415.m01628 serpin family protein / serine protease... 36 0.034
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 35 0.045
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 35 0.059
At1g62170.1 68414.m07013 serpin family protein / serine protease... 33 0.14
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 33 0.18
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 32 0.42
At2g35580.1 68415.m04357 serpin family protein / serine protease... 31 0.73
At1g01930.1 68414.m00111 zinc finger protein-related contains Pf... 31 0.96
At1g51170.1 68414.m05754 protein kinase family protein 29 2.9
At5g16690.1 68418.m01954 origin recognition complex subunit 3-re... 29 3.9
At2g46915.1 68415.m05859 expressed protein and genscan 28 5.1
At1g33340.1 68414.m04125 epsin N-terminal homology (ENTH) domain... 28 5.1
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +1
Query: 511 DPKLKKDAVEVFDADFEKVNFDNGAAAAGL-INKWVENKTNERIKDLLSEDSLDSFTRLV 687
DPK K F A + V+F + A +N WVE+ TN IKDLL + S+ S T +
Sbjct: 108 DPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWVEHHTNNLIKDLLPDGSVTSLTNKI 167
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 35.5 bits (78), Expect = 0.034
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 544 FDADFEKVNFDNGAAAAGL-INKWVENKTNERIKDLLSEDSLDSFTRLV 687
F A F KV+F + A L +N W TN+ IK++L S+ S T +
Sbjct: 147 FKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWI 195
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 35.1 bits (77), Expect = 0.045
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 514 PKLKKDAVEVFDADFEKVNFDNGAAAA-GLINKWVENKTNERIKDLLSEDSLDSFTRLV 687
P K+ + + A + +F + A +N W E +TN I ++L E S DS T+L+
Sbjct: 108 PSFKQLLEDSYKAASNQADFQSKAVEVIAEVNSWAEKETNGLITEVLPEGSADSMTKLI 166
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 34.7 bits (76), Expect = 0.059
Identities = 20/72 (27%), Positives = 32/72 (44%)
Frame = +2
Query: 290 NVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPDDDTIRXXXXXXXXXXXXIKGVTFN 469
NVV SP+S LL+LI G+ EE+L+ L P D + + +
Sbjct: 31 NVVFSPMSINVLLSLIAAGSNPVTKEEILSFLMSPSTDHLNAVLAKIADGGTERSDLCLS 90
Query: 470 VANKIYIKEGDY 505
A+ ++I + Y
Sbjct: 91 TAHGVWIDKSSY 102
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 33.5 bits (73), Expect = 0.14
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 508 VDPKLKKDAVEVFDADFEKVNFDNGAAAAGL-INKWVENKTNERIKDLLSEDSLDSFT 678
V+P K F A F +V+F + A +N W + TN IKDLL S+ S T
Sbjct: 171 VNPLSKDLFKNFFSAAFAQVDFRSKAEEVRTEVNAWASSHTNGLIKDLLPRGSVTSLT 228
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 526 KDAVE-VFDADFEKVNF-DNGAAAAGLINKWVENKTNERIKDLLSEDSLDSFTRLVLV 693
KD +E ++A +V+F A +N W E TN IK++LS+DS+ + +L+
Sbjct: 111 KDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHTNGLIKEILSDDSIKTIRESMLI 168
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +1
Query: 601 INKWVENKTNERIKDLLSEDSLDSFTRLVLV 693
+N W E TN IK +LS DS+D+ LV
Sbjct: 73 VNTWAEVHTNGLIKQILSRDSIDTIRSSTLV 103
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 31.1 bits (67), Expect = 0.73
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +1
Query: 508 VDPKLKKDAVEVFDADFEKVNFDNGAAAAGL-INKWVENKTNERIKDLL 651
V+P K + + A F +V+F A +N WVE +TN I +LL
Sbjct: 106 VEPSFKDLLLNSYKAAFNRVDFRTKADEVNREVNSWVEKQTNGLITNLL 154
>At1g01930.1 68414.m00111 zinc finger protein-related contains Pfam
PF00023: Ankyrin repeat; contains Pfam PF00096: Zinc
finger, C2H2 type domain and Prosite PS00028: Zinc
finger, C2H2 type, domain
Length = 580
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 553 DFEKVNFDNG-AAAAGLINKWVENKTNERIKDLLSEDSLDSFTRLVLV 693
D E V+F+N + VEN+ ER+++L+ E+ D R+VL+
Sbjct: 178 DAESVSFENDRGVSVDCCGSLVENEVTERLRNLIRENKDDRQMRVVLL 225
>At1g51170.1 68414.m05754 protein kinase family protein
Length = 404
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +2
Query: 467 NVANKIYIKEGDYESTQNLRRTLSRYSMQILKKLTSITEPQP 592
+V++ +K D S +LRR +R+ +QIL++L+ T P P
Sbjct: 47 SVSSPFALKLVDKSSASSLRR--ARWEIQILRRLSDDTNPNP 86
>At5g16690.1 68418.m01954 origin recognition complex subunit
3-related / ORC3-related low similarity to SP|Q9UBD5
Origin recognition complex subunit 3 (Origin recognition
complex subunit Latheo) {Homo sapiens}
Length = 556
Score = 28.7 bits (61), Expect = 3.9
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -3
Query: 444 FNFDDTAENDERIVS---SSGIPRLVNSSSCAGSVVPKVINASKYSADNGDDTTFF 286
FN DTAEND R S + + +V S S PK+ S+ + +D FF
Sbjct: 19 FNSSDTAENDIRASSGNHNGKLTGIVKSKRRIESPSPKIAKRSEVESVEEEDGQFF 74
>At2g46915.1 68415.m05859 expressed protein and genscan
Length = 708
Score = 28.3 bits (60), Expect = 5.1
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -3
Query: 435 DDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGDDTTFFFLSSSLQN 262
DD +E +E I SS +PR + +V ++ S D GD F LSS L +
Sbjct: 86 DDDSEEEEGI-SSIHVPREKYINVSKSDLVNGIVTKLLDSQDGGDADIFLLLSSCLDS 142
>At1g33340.1 68414.m04125 epsin N-terminal homology (ENTH)
domain-containing protein / clathrin assembly
protein-related contains Pfam PF01417: ENTH domain. ENTH
(Epsin N-terminal homology) domain; similar to clathrin
assembly protein AP180 (GI:6492344) [Xenopus laevis]
Length = 374
Score = 28.3 bits (60), Expect = 5.1
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 200 EPCSQYGFK-GFILCNHQVPAKFCNELDKKKNVVSSPLSAEYLLALIT 340
E CS YG K GF L + A CNEL ++++ S ++ + L + T
Sbjct: 300 EECSSYGGKRGFSLSTNLRDAITCNELKQEQHSASFSSTSPFSLPVET 347
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,676,406
Number of Sequences: 28952
Number of extensions: 260230
Number of successful extensions: 711
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1487069504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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