Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060300.seq
(686 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 88 1e-18
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 42 8e-05
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 40 3e-04
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 39 6e-04
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 35 0.013
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 34 0.022
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 33 0.051
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 32 0.068
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.16
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 31 0.21
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 29 0.63
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 2.5
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 27 2.5
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 27 3.4
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 26 4.4
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 26 4.4
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 26 5.9
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 26 5.9
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 87.8 bits (208), Expect = 1e-18
Identities = 39/80 (48%), Positives = 54/80 (67%)
Frame = +2
Query: 257 VLSCGLTXTAVVPLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSM 436
+L+CG T +A+ PLDL+KCR QV Y + GFK + +EG+RGL G PT I YS+
Sbjct: 31 LLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTILSKEGLRGLYTGGMPTLIGYSL 90
Query: 437 QGLCKFGFYEVFKVAYAGML 496
QG K+GFYE+FK Y+ ++
Sbjct: 91 QGCGKYGFYELFKHKYSTLV 110
Score = 80.6 bits (190), Expect = 2e-16
Identities = 39/64 (60%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Frame = +1
Query: 496 GRRDPYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTM-PGFASTLREAWPXMVKNE 672
G + + YRT +YLAASASAE +ADI L PMEA KVR+QT P FA+T REAW +V NE
Sbjct: 111 GAQKAHEYRTSIYLAASASAELLADIMLCPMEAIKVRVQTSNPRFANTTREAWSKIVTNE 170
Query: 673 GYGS 684
G+G+
Sbjct: 171 GFGT 174
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 41.9 bits (94), Expect = 8e-05
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 10/90 (11%)
Frame = +2
Query: 263 SCGLTXTAVVPLDLVKCRLQVXAEK---------YKNVVNGFKVSVREEGVRGLAKGWAP 415
+CG T P +++K R Q+ + YK+V F + R EG+RGL +G
Sbjct: 34 ACGAV-TLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGT 92
Query: 416 TFIXYSMQGLCKFGFYE-VFKVAYAGMLDD 502
++ C+ GFYE + + LDD
Sbjct: 93 AYVYQICLNGCRLGFYEPIRRTLNTWFLDD 122
Score = 28.7 bits (61), Expect = 0.83
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +2
Query: 293 PLDLVKCRLQVXAEK--------YKNVVNGFKVSVREEGVRGLAKG 406
P LVK R+Q + K YK++ N F ++E GV+GL G
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVG 193
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 39.9 bits (89), Expect = 3e-04
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 260 LSCGLTXTAVV-PLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSM 436
L G T TA+ P D++K R+Q+ YKN ++ K+ EG RG G+ + S+
Sbjct: 218 LISGATATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGFFLRVLRKSI 277
Query: 437 QGLCKFGFYE 466
+ YE
Sbjct: 278 SSTITWSVYE 287
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 39.1 bits (87), Expect = 6e-04
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +2
Query: 293 PLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGLCKFGFYEVF 472
P+ +VK R+ Y N GF ++ EG+RG G+AP+ + S QG +F YE
Sbjct: 118 PIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVS-QGALQFMAYEKL 176
Query: 473 KV 478
K+
Sbjct: 177 KL 178
Score = 32.7 bits (71), Expect = 0.051
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 293 PLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGLCKFGFYE 466
PL +++ RLQV +++++N + R +G+ G KG+ P + Q F YE
Sbjct: 206 PLLVIRTRLQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHLLRVVPQTCITFLVYE 263
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 34.7 bits (76), Expect = 0.013
Identities = 20/80 (25%), Positives = 39/80 (48%)
Frame = +2
Query: 248 SWCVLSCGLTXTAVVPLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIX 427
S ++S ++ PLD +K R Q + + + F+ +V+ EG++GL +G I
Sbjct: 22 SAALVSSAISNVIGYPLDSIKVRQQTY--NFPTIRSCFQNAVKNEGLKGLYRGLTLPLIS 79
Query: 428 YSMQGLCKFGFYEVFKVAYA 487
++ F Y+ K+ +A
Sbjct: 80 ATLSRSVSFTVYDSLKLTFA 99
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 33.9 bits (74), Expect = 0.022
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 260 LSCGLTXTAVVPLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQ 439
LS +T + PLD++K ++ + E Y+ VV +E G+ G KG S+
Sbjct: 176 LSGAITAAVLTPLDVIKTQINLRPESYRKVVRRI---YKENGIFGFEKGLGLRVFASSLG 232
Query: 440 GLCKFGFYEVFK 475
G YE K
Sbjct: 233 LSIYLGTYEHVK 244
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 32.7 bits (71), Expect = 0.051
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 335 KYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGLCKFGFYEVFK-VAYAGMLD 499
++ +V+ ++ + R +G+RGL +G+ P+ + + FG Y+ K V G L+
Sbjct: 174 QFNGLVDVYRKTYRSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLE 229
Score = 31.5 bits (68), Expect = 0.12
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
Frame = +2
Query: 260 LSCGLTXTAVVPLDLVKCRLQVXAE---------KYKNVVNGFKVSVREEGVRGLAKGWA 412
+S ++ TA P++ VK +Q E +YK + FK + EEGV L +G
Sbjct: 36 VSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNT 95
Query: 413 PTFIXYSMQGLCKFGFYEVFK 475
+ Y F F + FK
Sbjct: 96 ANVLRYFPTQALNFAFKDKFK 116
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 32.3 bits (70), Expect = 0.068
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 4/81 (4%)
Frame = +2
Query: 293 PLDLVKCRLQVXAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGLCKFGFYE 466
PLD+VK R+Q+ K Y + K V+ EG L +G P + + + KF +
Sbjct: 28 PLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASND 87
Query: 467 VFKVAYAGML--DDETPTLTV 523
+ + + D +P L++
Sbjct: 88 TYSKLWRKVFKRKDSSPALSI 108
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 31.1 bits (67), Expect = 0.16
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = +2
Query: 236 RSLRSWCVLSCGLTXTA--VVPLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGW 409
R L S +C +T + + P D++K R+Q+ + KYK+ ++ R EG+ +
Sbjct: 112 RPLASALAGACAITISDAFMTPFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFYISY 171
Query: 410 APTFIXYSM 436
PT I S+
Sbjct: 172 -PTCIAMSI 179
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 30.7 bits (66), Expect = 0.21
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Frame = +2
Query: 266 CGLTXTAV-----VPLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGW 409
CG+T V PL+++K R Q+ + +V+N R EG++G +G+
Sbjct: 89 CGMTAEVVSSFVWTPLEVIKARTQISQKG--SVINTISTLARSEGLKGFYRGY 139
Score = 25.8 bits (54), Expect = 5.9
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 13/78 (16%)
Frame = +2
Query: 281 TAVVPLDLVKCRLQVX-------------AEKYKNVVNGFKVSVREEGVRGLAKGWAPTF 421
T PLD+VK R QV AEK ++ K+ + GV+G +G
Sbjct: 189 TISTPLDIVKTRYQVATSSAMRKAEYGLQAEKELGILEIAKLLFSKHGVKGFTRGLFTRM 248
Query: 422 IXYSMQGLCKFGFYEVFK 475
G+ +E FK
Sbjct: 249 CYIMPSGMISMSVFESFK 266
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 29.1 bits (62), Expect = 0.63
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Frame = +2
Query: 284 AVVPLDLVKCRLQVXA----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGLCK 451
A P D+VK ++Q YKN K + G+RG +G+ P + +
Sbjct: 229 AAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVT 288
Query: 452 FGFYE 466
F YE
Sbjct: 289 FYVYE 293
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 374 REEGVRGLAKGWAPTFIXYSMQGLCKFGFYE 466
+ EG+ GL +G+ P S Q F FYE
Sbjct: 293 KSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 27.1 bits (57), Expect = 2.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 293 PLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKG 406
P+D V LQ YK+ + F R G++GL +G
Sbjct: 212 PVDTVVKTLQTFPSNYKSFKDCFLSIYRNSGIKGLYRG 249
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 335 KYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGLCKFGFYEV 469
KY ++ FK+ E+G+ GL G + FG YEV
Sbjct: 311 KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSYEV 355
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 26.2 bits (55), Expect = 4.4
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 353 NGFKVSVREEGVRGLAKGWAPTFIXYSMQGLCKFGF 460
+ F++ + V G + W P + G+CK GF
Sbjct: 1105 SNFQIPMHVRSVHGWSCQWGPREDSMLLSGICKHGF 1140
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 526 FVYLAASASAEFIADIALSPMEAAKVRIQTMPGF 627
F L A A D++L P++ K R+Q GF
Sbjct: 83 FEALGAGICAGLAVDLSLFPIDTLKTRLQAKGGF 116
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 25.8 bits (54), Expect = 5.9
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 320 QVXAEKYKNVVNGFKVSVREEGVRGL 397
Q+ ++Y+ +NGFKV + EE + L
Sbjct: 1740 QLLFQRYQKELNGFKVQLEEEREKNL 1765
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 25.8 bits (54), Expect = 5.9
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +2
Query: 290 VPLDLVKCRLQVXAEKYK 343
+P+DLV RL++ A++YK
Sbjct: 137 LPVDLVPIRLEIDADRYK 154
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,669,236
Number of Sequences: 5004
Number of extensions: 51442
Number of successful extensions: 161
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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