Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060300.seq
(686 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26) 138 5e-33
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 50 2e-06
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 45 5e-05
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 40 0.001
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.031
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 36 0.031
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.041
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 36 0.041
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 34 0.094
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.16
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.22
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.22
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 33 0.29
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.50
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 31 0.87
SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.87
SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0) 31 0.87
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 31 1.2
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 30 1.5
SB_19128| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 30 2.0
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 30 2.0
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_20721| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6) 29 4.7
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 28 6.2
SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_29776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 28 8.1
>SB_21443| Best HMM Match : Mito_carr (HMM E-Value=2.8e-26)
Length = 205
Score = 138 bits (333), Expect = 5e-33
Identities = 60/83 (72%), Positives = 73/83 (87%)
Frame = +2
Query: 257 VLSCGLTXTAVVPLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSM 436
+LSCGLT TAVVPLDLVKCR+QV +KY ++VNGFK++++E+GVRGLA+GWAPTFI YSM
Sbjct: 63 ILSCGLTHTAVVPLDLVKCRIQVDPKKYGSMVNGFKITLKEDGVRGLARGWAPTFIGYSM 122
Query: 437 QGLCKFGFYEVFKVAYAGMLDDE 505
QGL KFGFYEVFK+ Y ML +E
Sbjct: 123 QGLGKFGFYEVFKIMYGNMLGEE 145
Score = 85.0 bits (201), Expect = 5e-17
Identities = 41/60 (68%), Positives = 46/60 (76%)
Frame = +1
Query: 496 GRRDPYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPXMVKNEG 675
G Y YRT +YLAASASAEF ADIAL+PMEA KVRIQT PG+A TLRE P ++K EG
Sbjct: 143 GEEYSYLYRTSLYLAASASAEFFADIALAPMEAVKVRIQTQPGWAGTLREGVPKLMKEEG 202
Score = 56.8 bits (131), Expect = 2e-08
Identities = 30/63 (47%), Positives = 37/63 (58%)
Frame = +3
Query: 66 MFSSLLDAARNSPFRGPLSPAQCQSTVAPVAIEQTGGMAASAAVPTESCEFGSPKYFALC 245
MFS + A+NS PLS A+C S V + + + ASAA SCEFGS KY+ALC
Sbjct: 1 MFSRYFETAKNSTLGDPLSVAKCPSDVR--SHRNSSRLMASAAGEQHSCEFGSAKYYALC 58
Query: 246 GVG 254
G G
Sbjct: 59 GFG 61
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +2
Query: 293 PLDLVKCRLQVXAEK-YKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGLCKFGFYEV 469
PLD+V+ RL + +K Y ++N F R+EG+R +G+ PT I F YE
Sbjct: 9 PLDMVRARLAITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYET 68
Query: 470 FKVAYAGMLDDETPT 514
K A+ D + PT
Sbjct: 69 CKKAFGEFYDGKKPT 83
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 45.2 bits (102), Expect = 5e-05
Identities = 35/88 (39%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Frame = +2
Query: 260 LSCGLTXTAVV-----PLDLVKCRLQVXAE----KYKNVVNGFKVSVREEGVRGLAKGWA 412
L CG AV PLD+V+ R+Q+ KY + +GFKV VR EG GL KG
Sbjct: 685 LFCGAVAGAVAQSGTYPLDVVRRRMQMERGEGMFKYSSTWDGFKVIVRSEGFIGLFKGMW 744
Query: 413 PTFIXYSMQGLCKFGFYEVFKVA-YAGM 493
P + + +F YEV K A YA M
Sbjct: 745 PNLLKVAPTIGIQFAVYEVSKSAMYARM 772
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/77 (25%), Positives = 31/77 (40%)
Frame = +2
Query: 257 VLSCGLTXTAVVPLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSM 436
++ G+T + + L ++QV KY V R+EG+ G KG +
Sbjct: 565 IMGGGVTSLYIFTI-LNSFQIQVTNAKYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVP 623
Query: 437 QGLCKFGFYEVFKVAYA 487
+F YE FK A
Sbjct: 624 YTAVQFAAYEEFKKGIA 640
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 44.4 bits (100), Expect = 9e-05
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +2
Query: 269 GLTXTAVVPLDLVKCRLQVXAEKYK--NVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQG 442
G++ TA PLD +K LQV A +V+GFK+ +RE G++ L +G I + +
Sbjct: 148 GVSRTATAPLDRLKVLLQVQASSTNRFGIVSGFKMMLREGGIKSLWRGNGANVIKIAPES 207
Query: 443 LCKFGFYEVFK 475
KF YE K
Sbjct: 208 GIKFFAYEKAK 218
Score = 34.3 bits (75), Expect = 0.094
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Frame = +2
Query: 263 SCGLTXTAVVPLDLVKCRLQVXAEKY-----KNVVNGFKVSVREEGVRGLAKGWAPTFIX 427
+CG A PL LV+ RLQ A + N+V+ + + E+G +GL +G AP F+
Sbjct: 339 TCG--QLASYPLSLVRTRLQAQAREKGGGQGDNMVSVLRKIITEDGFKGLYRGLAPNFLK 396
Query: 428 YSMQGLCKFGFYE 466
+ + YE
Sbjct: 397 VAPAVSISYVVYE 409
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +2
Query: 281 TAVVPLDLVKCRLQVXAE-KYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGLCKFG 457
T++ PL+++K RL + +Y+ +++ V ++EG+R +G P+ +
Sbjct: 246 TSIYPLEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLA 305
Query: 458 FYEVFKVAY 484
YE K Y
Sbjct: 306 VYETLKNFY 314
>SB_22047| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 421
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +2
Query: 230 IFRSLRSWCVLSCGLTXTAVVPLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGW 409
I S+ S C S + T P D++K R+ Y+ V F ++V EG+ L KGW
Sbjct: 301 IVHSMSSVC--SGLVAATISTPADVIKTRIMNNPSGYQGAVECFMLAVHREGLLSLYKGW 358
Query: 410 APTF 421
PT+
Sbjct: 359 LPTW 362
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Frame = +2
Query: 293 PLDLVKCRLQVXAEKY--------KNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGLC 448
P DLVK ++Q+ + + + F+ V + G RGL KGW P ++ +
Sbjct: 151 PTDLVKVQMQMEGRRLSFYPISSVRGTFHAFRNIVDKYGFRGLWKGWLPNVQRAALVNMG 210
Query: 449 KFGFYEVFK 475
Y+ K
Sbjct: 211 DLTTYDTVK 219
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/63 (42%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Frame = +2
Query: 281 TAVVPLDLVKCRLQ-----VXAEK-YKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQG 442
TAV P+DLVK R+Q + AEK YKN ++ F VR EG GL +G P + S +
Sbjct: 929 TAVYPIDLVKTRMQNQRAVLEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLLGVSPEK 988
Query: 443 LCK 451
K
Sbjct: 989 AIK 991
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +2
Query: 260 LSCGLTXTAVVPLDLVKCRLQVXAEK----YKNVVNGFKVSVREEGVRGLAKGWAPTFIX 427
L+ ++ TA PLD+V+ R+Q+ + YK+ ++ F V+ EG RGL KG P +
Sbjct: 170 LAGAVSQTATYPLDVVRRRMQMKGIRADFAYKSTLHAFSSIVKLEGFRGLYKGMWPNILK 229
Query: 428 Y 430
+
Sbjct: 230 W 230
Score = 34.3 bits (75), Expect = 0.094
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = +2
Query: 272 LTXTAVVPLDLVKCRLQVXAE--KYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGL 445
++ T+V PL+ VK LQ+ + K+K V+ +EEG+ G KG I
Sbjct: 47 VSRTSVSPLERVKILLQIQVKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVIRIFPYSA 106
Query: 446 CKFGFYEVFKVAYA 487
+F YE +K A
Sbjct: 107 VQFAAYEEYKKGIA 120
>SB_51922| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 200
Score = 35.9 bits (79), Expect = 0.031
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Frame = +2
Query: 260 LSCGLTXTAVVPLDLVKCRLQVXA-----EKYKNVVNGFKVSVREEGVR-GLAKGWAPTF 421
L+ + T PLD+V+ R+Q+ KY +N F E+G+R GL +G + +
Sbjct: 115 LAGATSQTLAYPLDVVRRRMQLAGTVADGHKYSTCINTFISVYTEDGIRRGLYRGLSINY 174
Query: 422 IXYSMQGLCKFGFYEVFK 475
+ Q F YEV K
Sbjct: 175 LRVCPQVAVMFAVYEVVK 192
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 35.9 bits (79), Expect = 0.031
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 293 PLDLVKCRLQVXAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGLCKFGFYE 466
P +L+K RLQV + Y ++ F +R EGVRGL KG+ + G C YE
Sbjct: 35 PANLIKIRLQVQRKTTLYNGSLDAFTKVIRTEGVRGLYKGYLVSCAGL-FAGQCYITTYE 93
Query: 467 VFK 475
+ +
Sbjct: 94 LVR 96
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 35.5 bits (78), Expect = 0.041
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 6/74 (8%)
Frame = +2
Query: 272 LTXTAVVPLDLVKCRLQVXA-----EKYKNVVNGFKVSVREEGVR-GLAKGWAPTFIXYS 433
++ T PLD+V+ R+Q+ KY +N +++G+R GL +G + ++
Sbjct: 185 VSQTIAYPLDVVRRRMQLAGAVPDGHKYNTCINTLVNVYKDDGIRRGLYRGLSINYLRVC 244
Query: 434 MQGLCKFGFYEVFK 475
Q FG YEV K
Sbjct: 245 PQVAIMFGVYEVTK 258
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Frame = +2
Query: 269 GLTXTAVV-PLDLVKCRL--QVXAEK-YKNVVNGFK-VSVREEGVRGLAKGWAPTFIXYS 433
G+T A PLD+V+ RL QV ++ Y + + +SV+E G + L KG+ PT + +
Sbjct: 75 GMTACACTYPLDMVRSRLAFQVAQDQGYTTITQTIRCISVKEGGPKALYKGFVPTLL--T 132
Query: 434 MQGLCKFGFYEVFKVAYAGMLD 499
+ GFY +F+ A L+
Sbjct: 133 IVPAMGIGFY-MFETMKAYFLE 153
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 35.5 bits (78), Expect = 0.041
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Frame = +2
Query: 245 RSWCVLSCGLTXTAVV---PLDLVKCRLQVXAEK-----YKNVVNGFKVSVREEGVRGLA 400
R W ++ T A+V P +++K RL V YK + + K +REEG+ L
Sbjct: 422 RDWSLVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALY 481
Query: 401 KGWAPTFI 424
KG P+F+
Sbjct: 482 KGVTPSFL 489
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 34.3 bits (75), Expect = 0.094
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Frame = +2
Query: 272 LTXTAVVPLDLVKCRLQVXAEK-----YKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSM 436
+ V P +++K RL V YK + + K +REEG+ L KG P+F+
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNAHYKGMRHALKTILREEGILALYKGVTPSFL---- 220
Query: 437 QGLCKFGFYEVFKVAYAGMLDDETPTLTVPSCT 535
GL F F +AY +LD T T PS T
Sbjct: 221 -GL--FPFAGGSFLAYQ-ILDKVDSTRTEPSAT 249
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Frame = +2
Query: 260 LSCGLTXTAVVPLDLVKCRLQVXA-----------EKYKNVVNGFKVSVREEGVRGLAKG 406
LS ++ ++P D++K R+QV ++Y V + F+ ++EEG GL KG
Sbjct: 38 LSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
Query: 407 WAPT 418
AP+
Sbjct: 98 LAPS 101
>SB_25734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1938
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 332 EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGLCKFGFYEV 469
+K GF ++ +EEG L K T YS++GL KF FYEV
Sbjct: 916 DKVYGEFQGFNITYKEEGGGTLYKTADHTKRSYSIKGLKKFTFYEV 961
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 7/61 (11%)
Frame = +2
Query: 263 SCGLTXTAVV-PLDLVKCRLQVXAEKYKNVVN--GFKVSVR----EEGVRGLAKGWAPTF 421
+ G+ TA PLD+V+ RL V +++ N G ++R EEG+RGL KG P+
Sbjct: 37 TAGVVATASTHPLDVVRARLTVQDMSTRSISNYTGIVSALRRIHIEEGIRGLYKGLVPSL 96
Query: 422 I 424
+
Sbjct: 97 V 97
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 338 YKNVVN-GFKVSVREEGVRGLAKGWAPTFIXYSMQGLCKFGFYEVFK 475
YK ++ G REEGVRGL +G P + ++ + G YE K
Sbjct: 55 YKGLIRTGLSRVYREEGVRGLYRGIFPALLRQAIYSSTRLGAYEPIK 101
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +2
Query: 260 LSCGLTXTAVV-PLDLVKCRLQVX----AEKYKNVVNGFKVSVREEGVRGLAKGWAPT 418
+S G+ +A+ P DLVK R Q YKN+ + F ++EG GL G PT
Sbjct: 122 VSSGVIGSAIATPTDLVKIRFQAVKIGETIPYKNMFHAFYKIAKKEGFLGLWTGMKPT 179
Score = 30.3 bits (65), Expect = 1.5
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
Frame = +2
Query: 260 LSCGLTXTAVV-PLDLVKCRLQVXAEK-------YKNVVNGFKVSVREEGVRGLAKGWAP 415
L G T V P+D+V+ R + Y+ ++ +VR EG+ L KG+ P
Sbjct: 219 LVAGFVATCVASPVDIVRTRFMTQPKDTKGRPLVYQGTLDCIYKTVRHEGILALYKGFFP 278
Query: 416 TFIXYSMQGLCKFGFYEVFKVAYAGM 493
+ + + F YE + YAG+
Sbjct: 279 NWTRTGLDTIIIFFVYERLR-RYAGL 303
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Frame = +2
Query: 260 LSCGLTXTAV-VPLDLVKCRLQVXAEKYKNVVNGFKVSVR----EEGVRGLAKGWAPTFI 424
L CG + + P + +KC LQV A + +G V+ EEGVRG+ +G PT I
Sbjct: 128 LFCGFCVSFLFAPAERIKCILQVEAGASGSTQSGPYAIVKRIYAEEGVRGIFRGLPPTMI 187
Score = 31.5 bits (68), Expect = 0.66
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
Frame = +2
Query: 293 PLDLVKCRLQVXAE-------KYKNVVNGFKVSVREEGVRGLAKG 406
PLDL+K RLQ + +K ++ F +VR EG+RGL KG
Sbjct: 40 PLDLLKVRLQAMNQVKPGETAPFKGAMDCFMKTVRLEGLRGLYKG 84
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +2
Query: 230 IFRSLRSWCVLSCGLTXTAVVPLDLVKCRLQV----XAEKYKNVVNGFKVSVREEGVRGL 397
+ RSL + + T + PLD VKC LQ+ Y V+ + RE GVRG+
Sbjct: 137 LLRSLAAGMIAGVA-TSFVLTPLDRVKCILQIEKAFGGSSYGGPVDCLRRIYREAGVRGV 195
Query: 398 AKGWAPT 418
KG + T
Sbjct: 196 YKGISVT 202
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 31.9 bits (69), Expect = 0.50
Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 260 LSCGLTXTAVV-PLDLVKCRLQVXAEKYKNVVNGFKVSV-REEGVRGLAKGWAPTFIXYS 433
++ G+ +V P ++VK R Q A +Y + G + R EG++GL KG P
Sbjct: 132 ITTGIMAVSVAQPTEVVKIRFQADAGRYTSGTMGTYAEIARNEGMKGLWKGVFPNMARLC 191
Query: 434 MQGLCKFGFYEVFK 475
+ + Y+ K
Sbjct: 192 TVNVTELVVYDSIK 205
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 31.1 bits (67), Expect = 0.87
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +2
Query: 275 TXTAVVPLDLVKCRLQVXA-----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQ 439
T A +P+D+ K R+Q +YK ++ VR EGV L KG+ P +
Sbjct: 107 TTVASMPVDIAKTRIQNMRIIDGKPEYKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPH 166
Query: 440 GLCKFGFYE 466
+ F F E
Sbjct: 167 TVLTFIFLE 175
>SB_19190| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1829
Score = 31.1 bits (67), Expect = 0.87
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -2
Query: 253 PTPQRAKYLGDPNSQDSVGTAADAAMPPVCSIATGATVDWHWAGDSG 113
P P RA L P + S G+ A+ A PP +ATG + + SG
Sbjct: 816 PPPGRASQL--PLQEQSSGSRAEEASPPPALVATGPSASYRLPNASG 860
>SB_26166| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 612
Score = 31.1 bits (67), Expect = 0.87
Identities = 18/72 (25%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Frame = +2
Query: 254 CVLSCGLTXTAVV-PLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIXY 430
C + G + V P D+VK RLQ+ Y + + G+ GL +G P +
Sbjct: 529 CGIMAGAMASVVTQPADVVKTRLQMNPYMYPSNRAAVVAIIEAGGIEGLFRGLVPRTVRR 588
Query: 431 SMQGLCKFGFYE 466
++ + YE
Sbjct: 589 TLMSAMAWTIYE 600
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +2
Query: 284 AVVPLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGW 409
A+ P++++K RLQ+ Y+ V++ +EEG+R + +
Sbjct: 14 AMNPIEVIKQRLQMYGSPYRGVIHCATSVFKEEGIRAFYRSY 55
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +2
Query: 515 LTVPSCTWRRL--RRRNSSPTSPCRPWRRLRSVSKPCLVSRAPSAKRGRXWSRTK 673
LT PS T R RRR+ +PT R R RS + L R P++ GR ++ K
Sbjct: 611 LTPPSFTPRSSISRRRSDTPTKRRRMHREHRSGERVLLSRRRPASAMGRITTKKK 665
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +2
Query: 281 TAVVPLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGW-APTFI 424
TA PLD +K RLQ A ++ +V+ EGVRGL KG AP +
Sbjct: 85 TAGQPLDTIKVRLQ--ASFGAGPLDMLARTVKTEGVRGLYKGMLAPVLV 131
>SB_19128| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 387
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 466 SVQSRLRRYAGRRDPYTYRTFVYLAASASAEFIAD 570
+V++R+R YA RR T R ++Y AE +AD
Sbjct: 121 AVETRIRTYASRRPFSTLRVYMYTYTYTYAEGVAD 155
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 29.9 bits (64), Expect = 2.0
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Frame = +2
Query: 254 CVLSCGLTXTAVV-PLDLVKCRLQVXAEK--------YKNVVNGFKVSVREEGVRGLAKG 406
C GL + P+DL K ++QV + Y+NV + + G+RG +G
Sbjct: 207 CGAGTGLVVAFIEGPIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQG 266
Query: 407 WAPTFIXYSMQGLCKFGFYEVFK---VAYAGMLDDETP 511
+ T + FGFYE K G ++D +P
Sbjct: 267 LSATLVRNIPANGFFFGFYEFTKNLLTPEGGTVNDVSP 304
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Frame = +2
Query: 293 PLDLVKCRLQVXAEK---------YKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGL 445
PL++VK R+Q+ E Y+NV + + EG+ + KG P I +
Sbjct: 24 PLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGILAMQKGLFPALIYQVIMNG 83
Query: 446 CKFGFYEV 469
+ G Y++
Sbjct: 84 TRLGSYQI 91
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 293 PLDLVKCRLQVXAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGLCKFGFY 463
P D +K ++Q KN ++ + ++EG +GL G P+ + F FY
Sbjct: 29 PFDTIKVKMQTFPSMSKNALDCGIKTFKQEGFKGLYAGTIPSLAANIAENSFLFLFY 85
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -2
Query: 220 PNSQDSVGTAADAAMPPVCSIATGATVDWHWAGD-SGPRNGEFRAASSNEENIIM 59
P Q T A PPV +G+ D W GD S P+ + R+ N +M
Sbjct: 398 PQPQKPPATRPSATPPPVTGDESGSDYDEDWGGDWSEPKPTQSRSIVGEMRNDLM 452
>SB_25940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 134 PVDGRARGYRADRWHGGVCCG 196
P +G+ RG+R GGVCCG
Sbjct: 91 PREGQIRGFRFVHISGGVCCG 111
>SB_48488| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 395 LAKGWAPTFIXYSMQGLCKFGFYEVFKV 478
L KGW T ++M G K+G E+ K+
Sbjct: 123 LLKGWGATSFEHAMIGAAKYGHIEIVKL 150
>SB_46203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 132 CQSTVAPVAIEQTGGMAASAAVPTES 209
C ST PV +QT A+SA VPT S
Sbjct: 154 CLSTARPVTTQQTKKPASSAFVPTTS 179
>SB_20721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 518 TVPSCTWRRL--RRRNSSPTSPCRPWRRLRSVSKPCLVSRAPSAKRGRXWSRTK 673
T PS T R RRR+ +PT R R RS + L R P++ GR ++ K
Sbjct: 126 TPPSFTPRLSISRRRSDTPTKRRRMHREYRSGERVLLSRRRPTSAMGRIITKKK 179
>SB_10451| Best HMM Match : Extensin_2 (HMM E-Value=3.6)
Length = 493
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 518 TVPSCTWRRL--RRRNSSPTSPCRPWRRLRSVSKPCLVSRAPSAKRGRXWSRTK 673
T PS T R RRR+ +PT R R RS + L R P++ GR ++ K
Sbjct: 325 TPPSFTPRSSISRRRSDTPTKRRRMHREHRSGERVLLSRRRPASAMGRITTKKK 378
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = +2
Query: 269 GLTXT-AVVPLDLVKCRLQV-----XAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 424
G+T + AV PLD++K RLQ+ Y +++ K EG+ KG P I
Sbjct: 216 GMTASVAVNPLDVIKTRLQLLNRPQGEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMI 273
>SB_10272| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = +2
Query: 77 VARCGAELSVPWPTIARPVPVDGRARGYRADRWHGGVCCGTHGVL 211
+ RCG + W +P P++GR R W G C +L
Sbjct: 338 IRRCGTH-APGWMVGRQPSPIEGRVRRTVCFNWAGNCCKWRQNIL 381
>SB_29776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 479 AYAGMLDDETPTLTVPSCTWRRLRRRNSSPTSPCRPWRRLRSVSKPCLVSRAPSAKRGR 655
A A + D+ TLT +R+R R + T +R+R + +P L +AKR R
Sbjct: 201 ANAKRIRDKERTLTEEQANAKRIRERGHTSTEEQANAKRIRDMERP-LTEEQANAKRIR 258
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Frame = +2
Query: 194 GTHGVL*IWIA*IFRSLRSWCVLSCG-----LTXTAVVPLDLVKCRLQVXAE----KYKN 346
G + +L W + +F S L G ++ + P D++K R+Q +YK
Sbjct: 114 GVYELLCDWFSNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKFRYKG 173
Query: 347 VVNGFKVSVREEGVRGLAKGWAPTFIXYSMQGL 445
+++ S +EEG+ +G PT + +Q L
Sbjct: 174 MMDCALQSYKEEGMIVFTRGIWPTLLRGFLQVL 206
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,006,296
Number of Sequences: 59808
Number of extensions: 480264
Number of successful extensions: 1521
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1517
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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