Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060299.seq
(556 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 26 0.95
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 25 1.3
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 25 1.7
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 2.2
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 24 2.9
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p... 24 3.9
AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein. 23 6.7
AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein. 23 6.7
AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein. 23 6.7
AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein. 23 6.7
AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein. 23 6.7
AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein. 23 6.7
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 23 6.7
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 23 6.7
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 23 8.9
AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein. 23 8.9
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 25.8 bits (54), Expect = 0.95
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = -1
Query: 514 SAASTCRSDP*SRRLPWARAPPGWSRSWPCC-TPASR 407
+A ++ R P SRR P R+P R WP C +P +R
Sbjct: 242 NAHASIRKIPPSRRNPRRRSPRSGGR-WPSCRSPPAR 277
Score = 24.6 bits (51), Expect = 2.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 380 ANKGSWAPRA*SWSATRPTTRPSR 451
A + S + R SW +RPT++P R
Sbjct: 276 ARRRSRSTRPTSWPRSRPTSKPKR 299
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 25.4 bits (53), Expect = 1.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -1
Query: 121 ALRGPVKLQLEGLMRRYLILVRCDVHSLFYRNIF 20
+LR ++L R+L +R DV +F+R +F
Sbjct: 342 SLRKAIRLSKNEAFDRFLRSIREDVTGIFFRKVF 375
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 25.0 bits (52), Expect = 1.7
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +1
Query: 376 KCEQGFVGPKGVKLECNKANYETIQVVRGPKGAVYFKGQSG 498
K ++G+ G KG C + +RGP+G KG G
Sbjct: 746 KGDKGYSGLKGEPGRCASIPPNLEEAIRGPQGLQGEKGAPG 786
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.6 bits (51), Expect = 2.2
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +1
Query: 388 GFVGPKGVKLECNKANYETIQVVRGPKGAVYFKGQSG 498
GF+GPKG K E ++ + + + GP+G +G G
Sbjct: 636 GFIGPKGDKGERDR---DGLNGLNGPQGMKGDRGMPG 669
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 24.2 bits (50), Expect = 2.9
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 25 CFCKTRSGRHSEPR*DIVS*DLPI 96
C+C + GR ++P D + LP+
Sbjct: 412 CYCPVKFGRKADPNGDYIRRYLPV 435
>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
protein.
Length = 3325
Score = 23.8 bits (49), Expect = 3.9
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +2
Query: 383 NKGSWAPRA*SWSATR-PTTRPSRWCAGPREPSTSRVRAA 499
N+G W SW PT RPS GPR + R A
Sbjct: 1130 NRGQWP----SWMKQNLPTFRPSGPAMGPRTAMAAGTRRA 1165
>AY390608-1|AAR27305.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 154 PVPVLHGADVPALRGPVKL 98
PVP L+ + PA R P KL
Sbjct: 165 PVPSLNSVNEPANRAPPKL 183
>AY390607-1|AAR27304.1| 242|Anopheles gambiae SP22D protein.
Length = 242
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 154 PVPVLHGADVPALRGPVKL 98
PVP L+ + PA R P KL
Sbjct: 165 PVPSLNSVNEPANRAPPKL 183
>AY390606-1|AAR27303.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 154 PVPVLHGADVPALRGPVKL 98
PVP L+ + PA R P KL
Sbjct: 164 PVPSLNSVNEPANRAPPKL 182
>AY390605-1|AAR27302.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 154 PVPVLHGADVPALRGPVKL 98
PVP L+ + PA R P KL
Sbjct: 164 PVPSLNSVNEPANRAPPKL 182
>AY390604-1|AAR27301.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 154 PVPVLHGADVPALRGPVKL 98
PVP L+ + PA R P KL
Sbjct: 164 PVPSLNSVNEPANRAPPKL 182
>AY390603-1|AAR27300.1| 241|Anopheles gambiae SP22D protein.
Length = 241
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 154 PVPVLHGADVPALRGPVKL 98
PVP L+ + PA R P KL
Sbjct: 164 PVPSLNSVNEPANRAPPKL 182
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 154 PVPVLHGADVPALRGPVKL 98
PVP L+ + PA R P KL
Sbjct: 236 PVPSLNSVNEPANRAPPKL 254
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 154 PVPVLHGADVPALRGPVKL 98
PVP L+ + PA R P KL
Sbjct: 235 PVPSLNSVNEPANRAPPKL 253
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 22.6 bits (46), Expect = 8.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 386 KGSWAPRA*SWSATRPTTRPSRWCAGPREPSTSRVRAAS 502
+G +P+A S +T S C+GP E + S A+S
Sbjct: 553 RGWSSPQASPVSGYDSSTSISSVCSGPEEDNASHSSASS 591
>AJ130951-1|CAA10260.1| 189|Anopheles gambiae SG3 protein protein.
Length = 189
Score = 22.6 bits (46), Expect = 8.9
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 475 RLPWARAPPGWSRSWPCCTPASRP 404
R PW PP R W P RP
Sbjct: 93 RPPWHPRPPFGGRPWWLRPPFHRP 116
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 542,614
Number of Sequences: 2352
Number of extensions: 10560
Number of successful extensions: 84
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 84
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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