Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060299.seq
(556 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74043-10|CAA98542.2| 653|Caenorhabditis elegans Hypothetical p... 31 0.74
AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical ... 28 3.9
AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical ... 28 3.9
Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical p... 28 5.2
Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical p... 28 5.2
Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical p... 28 5.2
Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical p... 28 5.2
U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical pr... 28 5.2
EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform... 28 5.2
AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-li... 28 5.2
Z95559-5|CAB63362.2| 326|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF067608-5|AAK95865.1| 523|Caenorhabditis elegans Hypothetical ... 27 6.9
U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical pr... 27 9.1
AL117204-35|CAB55154.2| 861|Caenorhabditis elegans Hypothetical... 27 9.1
>Z74043-10|CAA98542.2| 653|Caenorhabditis elegans Hypothetical
protein T19B10.3 protein.
Length = 653
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +1
Query: 295 HLYANADSIDDNCKYYFYLINRPILVLKCEQGFVGPKGVKLECN-KANYETIQVVRGPKG 471
H+Y N ID + Y+ L +++ C + + +E + +ETI +G
Sbjct: 457 HVYLNGKYIDTLTRRYYNLTRNSVIIEGCLENEENRLFMLVENQGRKTFETINDRKGILS 516
Query: 472 AVYFKGQSGKYW 507
V+ GQ+ ++W
Sbjct: 517 DVFMNGQAIQFW 528
>AF078786-2|AAC26941.1| 889|Caenorhabditis elegans Hypothetical
protein M01G5.1 protein.
Length = 889
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +3
Query: 378 VRTRVRGPQGREAGVQQGQLRDHPGGARAQGSR 476
VR R RG +GR G G+ R+ GG+R +G R
Sbjct: 842 VRGR-RGGRGRSGGRGGGRGRERDGGSRGRGGR 873
>AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical
protein C44B12.5 protein.
Length = 397
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = -1
Query: 556 KPCAASESHVTASPSAASTCRSDP*SRRLPWARAPPGWSRSWPCCTPASRPWG 398
+P AA ++AS +S+ + W AP S SW A WG
Sbjct: 315 QPVAAQSPPMSASQPLVDLWQSENTAPSTSWGAAPAAPSTSWGAAPAAPPTWG 367
>Z92780-8|CAI46553.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 183 AWIPPPVSRVQYRSCMVRMYQRFVAQSNSN 94
AW+PP +SR + M ++ V ++NSN
Sbjct: 158 AWVPPGLSRKKVEEYMSQLPNNVVPRTNSN 187
>Z92780-7|CAI46552.1| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 183 AWIPPPVSRVQYRSCMVRMYQRFVAQSNSN 94
AW+PP +SR + M ++ V ++NSN
Sbjct: 195 AWVPPGLSRKKVEEYMSQLPNNVVPRTNSN 224
>Z92780-6|CAI46551.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 183 AWIPPPVSRVQYRSCMVRMYQRFVAQSNSN 94
AW+PP +SR + M ++ V ++NSN
Sbjct: 195 AWVPPGLSRKKVEEYMSQLPNNVVPRTNSN 224
>Z92780-5|CAI46550.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 183 AWIPPPVSRVQYRSCMVRMYQRFVAQSNSN 94
AW+PP +SR + M ++ V ++NSN
Sbjct: 103 AWVPPGLSRKKVEEYMSQLPNNVVPRTNSN 132
>Z81068-16|CAJ30230.1| 587|Caenorhabditis elegans Hypothetical
protein F25H5.1b protein.
Length = 587
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 183 AWIPPPVSRVQYRSCMVRMYQRFVAQSNSN 94
AW+PP +SR + M ++ V ++NSN
Sbjct: 158 AWVPPGLSRKKVEEYMSQLPNNVVPRTNSN 187
>Z81068-15|CAB02980.2| 624|Caenorhabditis elegans Hypothetical
protein F25H5.1a protein.
Length = 624
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 183 AWIPPPVSRVQYRSCMVRMYQRFVAQSNSN 94
AW+PP +SR + M ++ V ++NSN
Sbjct: 195 AWVPPGLSRKKVEEYMSQLPNNVVPRTNSN 224
>Z81068-14|CAJ30229.1| 691|Caenorhabditis elegans Hypothetical
protein F25H5.1f protein.
Length = 691
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 183 AWIPPPVSRVQYRSCMVRMYQRFVAQSNSN 94
AW+PP +SR + M ++ V ++NSN
Sbjct: 195 AWVPPGLSRKKVEEYMSQLPNNVVPRTNSN 224
>Z81068-13|CAJ30228.1| 532|Caenorhabditis elegans Hypothetical
protein F25H5.1c protein.
Length = 532
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 183 AWIPPPVSRVQYRSCMVRMYQRFVAQSNSN 94
AW+PP +SR + M ++ V ++NSN
Sbjct: 103 AWVPPGLSRKKVEEYMSQLPNNVVPRTNSN 132
>U28941-6|AAC71101.2| 1788|Caenorhabditis elegans Hypothetical
protein F31D5.5 protein.
Length = 1788
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 322 DDNCKYYFYLINRPILVLKCEQGFVGPKGVKLECNKAN 435
+DN +Y+ +N I CE F +G + K+N
Sbjct: 634 NDNSEYFGVYVNNQICQQTCESSFTNQEGAHVYIRKSN 671
>EF443133-1|ABO31113.1| 656|Caenorhabditis elegans LIM-9 isoform
protein.
Length = 656
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -2
Query: 183 AWIPPPVSRVQYRSCMVRMYQRFVAQSNSN 94
AW+PP +SR + M ++ V ++NSN
Sbjct: 195 AWVPPGLSRKKVEEYMSQLPNNVVPRTNSN 224
>AY314774-1|AAQ84881.1| 1757|Caenorhabditis elegans methuselah-like
protein MTH-1 protein.
Length = 1757
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 322 DDNCKYYFYLINRPILVLKCEQGFVGPKGVKLECNKAN 435
+DN +Y+ +N I CE F +G + K+N
Sbjct: 603 NDNSEYFGVYVNNQICQQTCESSFTNQEGAHVYIRKSN 640
>Z95559-5|CAB63362.2| 326|Caenorhabditis elegans Hypothetical
protein Y41E3.12 protein.
Length = 326
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 186 LAWIPPPVSRVQYRSCMVRMYQRFVAQSNSNW 91
LAWIP P+S ++ MY+ V Q+ +NW
Sbjct: 178 LAWIPDPLSELKPSKEAAAMYKN-VPQAWNNW 208
>AF067608-5|AAK95865.1| 523|Caenorhabditis elegans Hypothetical
protein B0511.8 protein.
Length = 523
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/25 (40%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Frame = -1
Query: 469 PWARAPPGWSRSW-PCCTPASRPWG 398
PW RA W R W P + WG
Sbjct: 117 PWTRAEKTWRRDWHPTLMATRKAWG 141
>U29614-6|AAA68809.2| 378|Caenorhabditis elegans Hypothetical
protein F18E9.3 protein.
Length = 378
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +2
Query: 428 RPTTRPSRWCAGPREP 475
+ TT SRW AGPR P
Sbjct: 245 KTTTSASRWVAGPRHP 260
>AL117204-35|CAB55154.2| 861|Caenorhabditis elegans Hypothetical
protein Y116A8C.14 protein.
Length = 861
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Frame = -1
Query: 526 TASPSAASTCRSDP*SRRLPWARAPPGW---SRSWPCC 422
T + + C DP RLP + AP W S WP C
Sbjct: 472 TQPRKSGAVCGQDPSYCRLPLSVAPYEWPDDSTQWPIC 509
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,637,633
Number of Sequences: 27780
Number of extensions: 228783
Number of successful extensions: 814
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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