Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060297.seq
(688 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0103 + 1082077-1082167,1083037-1085477 122 3e-28
02_04_0017 + 18937774-18937864,18938505-18940945 122 3e-28
01_06_0662 + 30987187-30987277,30987825-30990214 117 8e-27
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 113 1e-25
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 67 1e-11
03_05_0511 + 25056018-25059107 60 1e-09
02_04_0148 - 20198407-20201424 60 2e-09
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 53 2e-07
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 48 7e-06
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 48 9e-06
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 47 1e-05
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 45 5e-05
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 44 1e-04
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 39 0.003
02_04_0462 + 23131433-23132836 36 0.040
03_01_0548 + 4099386-4099847,4100435-4101316 34 0.12
03_01_0547 + 4093196-4093657,4094267-4095148 34 0.12
03_01_0544 + 4082528-4082989,4083585-4084466 34 0.12
03_01_0543 + 4076981-4077442,4078145-4079026 34 0.12
01_07_0374 + 43144861-43144998,43145695-43145794,43146499-431466... 31 1.1
06_03_0123 - 16924074-16926089 30 1.5
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 30 1.5
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 30 2.0
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 30 2.0
08_02_1553 + 27835320-27835364,27836853-27836966,27837062-278374... 29 2.6
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 29 3.5
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 29 3.5
05_04_0199 + 18980017-18980759,18981478-18981532 29 3.5
09_02_0071 - 3877231-3877807,3880716-3880722,3880723-3881000,388... 29 4.6
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 28 8.0
01_06_1466 + 37559600-37559795,37560597-37560730,37561252-375614... 28 8.0
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 122 bits (294), Expect = 3e-28
Identities = 71/144 (49%), Positives = 91/144 (63%)
Frame = +1
Query: 256 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPXH 435
+ R TDTR DE +R ITIKST IS+F+E+ ++ L +R +E +LINLIDSP H
Sbjct: 53 DVRMTDTRADEAERGITIKSTGISLFYEMSDESLKLYKG--ERDGNE--YLINLIDSPGH 108
Query: 436 VDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMGPWLFLSS 615
VDFSSEVTAALR+TD QTETVLRQA+ ERI+P+L +NKM FL
Sbjct: 109 VDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR-CFLEL 167
Query: 616 NLKLKNYTRRSSVFXENVNVIIAT 687
++ + + S EN NVI+AT
Sbjct: 168 QVEGEEAYQTFSRVIENANVIMAT 191
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/47 (82%), Positives = 43/47 (91%)
Frame = +2
Query: 101 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIA 241
MV FTV+E+R +MDKK NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIA 47
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 122 bits (294), Expect = 3e-28
Identities = 71/144 (49%), Positives = 91/144 (63%)
Frame = +1
Query: 256 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPXH 435
+ R TDTR DE +R ITIKST IS+F+E+ ++ L +R +E +LINLIDSP H
Sbjct: 53 DVRMTDTRADEAERGITIKSTGISLFYEMSDESLKLYKG--ERDGNE--YLINLIDSPGH 108
Query: 436 VDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMGPWLFLSS 615
VDFSSEVTAALR+TD QTETVLRQA+ ERI+P+L +NKM FL
Sbjct: 109 VDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR-CFLEL 167
Query: 616 NLKLKNYTRRSSVFXENVNVIIAT 687
++ + + S EN NVI+AT
Sbjct: 168 QVEGEEAYQTFSRVIENANVIMAT 191
Score = 82.6 bits (195), Expect = 3e-16
Identities = 39/47 (82%), Positives = 43/47 (91%)
Frame = +2
Query: 101 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIA 241
MV FTV+E+R +MDKK NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA
Sbjct: 1 MVKFTVEELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIA 47
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 117 bits (282), Expect = 8e-27
Identities = 69/144 (47%), Positives = 90/144 (62%)
Frame = +1
Query: 256 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPXH 435
+ R TD+R DE +R ITIKST IS+++E+ ++ L + R +E +LINLIDSP H
Sbjct: 53 DVRMTDSRSDEAERGITIKSTGISLYYEMSDESLK--SYKGDRDGNE--YLINLIDSPGH 108
Query: 436 VDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMGPWLFLSS 615
VDFSSEVTAALR+TD QTETVLRQA+ ERI+P+L +NKM FL
Sbjct: 109 VDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR-CFLEL 167
Query: 616 NLKLKNYTRRSSVFXENVNVIIAT 687
+ + + S EN NVI+AT
Sbjct: 168 QVGGEEAYQTFSRVIENANVIMAT 191
Score = 81.8 bits (193), Expect = 5e-16
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = +2
Query: 101 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIA 241
MV FTV+E+R +MDKK NIRNMSV+AHVDHGKSTLTDSLV+ AGIIA
Sbjct: 1 MVKFTVEEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIA 47
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 113 bits (272), Expect = 1e-25
Identities = 66/143 (46%), Positives = 86/143 (60%)
Frame = +1
Query: 256 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPXH 435
+ R TDTR DE +R ITIKST IS+++E+ + L + + +LINLIDSP H
Sbjct: 53 DVRMTDTRADEAERGITIKSTGISLYYEMTDAAL----RSFEGKRDGNSYLINLIDSPGH 108
Query: 436 VDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMGPWLFLSS 615
+DFSSEVTAALR+TD QTETVLRQ++AERIKP+L +NKM FL
Sbjct: 109 IDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQSLAERIKPVLTVNKMDR-CFLEL 167
Query: 616 NLKLKNYTRRSSVFXENVNVIIA 684
+ + S E+VNV +A
Sbjct: 168 QQSGEEAYQAFSRVIESVNVTMA 190
Score = 80.2 bits (189), Expect = 1e-15
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +2
Query: 101 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIA 241
MV FT +E+R MDKK NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA
Sbjct: 1 MVRFTAEELRASMDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIA 47
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 67.3 bits (157), Expect = 1e-11
Identities = 39/113 (34%), Positives = 59/113 (52%)
Frame = +1
Query: 253 RETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPX 432
R RFTDTR DEQ+R ++IK+ +S+ E + K +L N++D+P
Sbjct: 184 RHVRFTDTRVDEQERRVSIKAVPMSLVLE---------------GGNGKSYLCNIMDTPG 228
Query: 433 HVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKM 591
HV+FS E+TAALR+ D TE +R A ER+ ++ +NK+
Sbjct: 229 HVNFSDEMTAALRIADGAVLVVDAAEGVMVNTERAIRHATQERLPIVVVINKV 281
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Frame = +2
Query: 113 TVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII--AGARAERPVSLTRVRT 286
T D + G+ +RN++++ H+ HGK+ D LV + + + ER V T R
Sbjct: 134 TTDFLLGLAANPALVRNVALVGHLQHGKTVFMDMLVEQTHEVDTFDSEGERHVRFTDTRV 193
Query: 287 NK 292
++
Sbjct: 194 DE 195
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 60.5 bits (140), Expect = 1e-09
Identities = 28/64 (43%), Positives = 38/64 (59%)
Frame = +1
Query: 400 GFLINLIDSPXHVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILF 579
G +NLIDSP H+DF SEV++A R++D QT LRQA ER++P L
Sbjct: 74 GHRVNLIDSPGHIDFCSEVSSAARLSDSALILVDAVEGVHIQTHAALRQAFLERLRPCLV 133
Query: 580 MNKM 591
+NK+
Sbjct: 134 LNKL 137
Score = 41.5 bits (93), Expect = 6e-04
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2
Query: 149 RNIRNMSVIAHVDHGKSTLTDSLVSKAG 232
R +RN ++AHVDHGK+TL D LV+ G
Sbjct: 8 RRVRNTCILAHVDHGKTTLADHLVASCG 35
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 60.1 bits (139), Expect = 2e-09
Identities = 38/110 (34%), Positives = 55/110 (50%)
Frame = +1
Query: 262 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPXHVD 441
R D ++EQ R IT+KS +I++ + + G ++LIDSP H+D
Sbjct: 55 RVMDHLEEEQRRAITMKSASIAL---------------RRGGEDGGGHRVHLIDSPGHID 99
Query: 442 FSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKM 591
F SEV+AA R+ D QT LRQA ER++P L +NK+
Sbjct: 100 FCSEVSAAARLADSALVLVDAAEGVRVQTHAALRQAFVERLRPCLVLNKV 149
Score = 38.3 bits (85), Expect = 0.006
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 149 RNIRNMSVIAHVDHGKSTLTDSLVSKAG 232
R +RN ++AHVDHGK++L D L++ G
Sbjct: 14 RRVRNTCILAHVDHGKTSLADHLIAAYG 41
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 52.8 bits (121), Expect = 2e-07
Identities = 36/129 (27%), Positives = 68/129 (52%)
Frame = +1
Query: 301 ITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPXHVDFSSEVTAALRVTD 480
+T ++ IS+++E+ E L + D+R + G LINLIDSP + S++V AL + D
Sbjct: 254 VTESNSLISLYYEMPEDSLR--SYKDKR--AGNGHLINLIDSPVCCNLSNDVQPALCIMD 309
Query: 481 XXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMGPWLFLSSNLKLKNYTRRSSVFX 660
T+T +R+A+ +I+P+ +NK+ + FL N+ + + S
Sbjct: 310 GALVVVDSFEGVTLWTKTSIREALNMKIQPVFTLNKIDRF-FLEQNVDGEKAYQTLSSLI 368
Query: 661 ENVNVIIAT 687
++VN +++
Sbjct: 369 DSVNATMSS 377
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +2
Query: 119 DEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGI 235
+E+ +M K NIRN+ VIA HGK+ + DSLV+ AGI
Sbjct: 211 EELHSIMCNKNNIRNVLVIADAGHGKTAILDSLVATAGI 249
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 48.0 bits (109), Expect = 7e-06
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 131 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGI-IAGARAERPVSLTRVRTNKTVAS 304
G +D R IRN++VIAHVDHGK+TL D L+ + G I RA +SL R R T+AS
Sbjct: 57 GALDPSR-IRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERER-GITIAS 113
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 409 INLIDSPXHVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNK 588
+N++D+P H DF EV + + + QT+ VL +A+ ++PIL +NK
Sbjct: 125 LNMVDTPGHADFGGEVERVVGMVEGAVLVVDAGEGPLAQTKFVLSKALKYGLRPILLLNK 184
Query: 589 M 591
+
Sbjct: 185 V 185
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 47.6 bits (108), Expect = 9e-06
Identities = 30/76 (39%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +1
Query: 400 GFLINLIDSPXHVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILF 579
G+ +N+ID+P HVDF+ EV ALRV D Q+ TV RQ I + F
Sbjct: 135 GYQVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEIPRVAF 194
Query: 580 MNK---MG--PWLFLS 612
+NK MG PW L+
Sbjct: 195 INKLDRMGADPWKVLN 210
Score = 31.5 bits (68), Expect = 0.65
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +2
Query: 122 EIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 238
E+ + +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 57 EVARWRESMDRMRNIGISAHIDSGKTTLTERVLYYTGRI 95
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +1
Query: 256 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPXH 435
+ ++ D + E++R IT+K+ +MF+ L PD +L+NLID+P H
Sbjct: 90 QPQYLDKLQVERERGITVKAQTATMFYRHANNQLPASDQPDA-----PSYLLNLIDTPGH 144
Query: 436 VDFSSEVTAAL 468
VDFS EV+ +L
Sbjct: 145 VDFSYEVSRSL 155
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2
Query: 155 IRNMSVIAHVDHGKSTLTDSLVSKAGII 238
+RN S+IAHVDHGKSTL D L+ G I
Sbjct: 57 VRNFSIIAHVDHGKSTLADRLLELTGTI 84
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 45.2 bits (102), Expect = 5e-05
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 152 NIRNMSVIAHVDHGKSTLTDSLVSKAGII 238
NIRN S+IAH+DHGKSTL D L+ G +
Sbjct: 76 NIRNFSIIAHIDHGKSTLADKLLELTGTV 104
Score = 35.1 bits (77), Expect = 0.053
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +1
Query: 391 SEKGFLINLIDSPXHVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKP 570
+++ + +NLID+P HVDFS EV+ +L + QT + A+ ++
Sbjct: 139 NDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENDLEI 198
Query: 571 ILFMNKM 591
I +NK+
Sbjct: 199 IPVLNKI 205
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 44.0 bits (99), Expect = 1e-04
Identities = 15/30 (50%), Positives = 27/30 (90%)
Frame = +2
Query: 146 KRNIRNMSVIAHVDHGKSTLTDSLVSKAGI 235
+R++RN++++AHVDHGK+TL DS++ +A +
Sbjct: 116 RRDVRNIAIVAHVDHGKTTLVDSMLRQAKV 145
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +1
Query: 397 KGFLINLIDSPXHVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPIL 576
KG IN+ID+P H DF EV L + + QT VL++A+ ++
Sbjct: 180 KGTKINIIDTPGHSDFGGEVERVLNMVEGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVV 239
Query: 577 FMNKM 591
+NK+
Sbjct: 240 VVNKI 244
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +1
Query: 310 KSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPXHVDFSSEVTAALRVTD 480
+ T + E E++ + IT+P K IN+ID+P HVDF+ EV ALRV D
Sbjct: 139 EGTVTMDWMEQEQERGITITSPPTTAFWNK-HRINIIDTPGHVDFTLEVERALRVLD 194
>02_04_0462 + 23131433-23132836
Length = 467
Score = 35.5 bits (78), Expect = 0.040
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 128 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAER 259
RG ++ + N+ I HVDHGK+TLT +L + G+ ++
Sbjct: 61 RGKFERTKPHVNIGTIGHVDHGKTTLTAALTMVLASVGGSAPKK 104
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 137 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAER 259
M K++ N+ VI HVD GKST T L+ K G I ER
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIER 41
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 137 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAER 259
M K++ N+ VI HVD GKST T L+ K G I ER
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIER 41
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 137 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAER 259
M K++ N+ VI HVD GKST T L+ K G I ER
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIER 41
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 137 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAER 259
M K++ N+ VI HVD GKST T L+ K G I ER
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIER 41
>01_07_0374 + 43144861-43144998,43145695-43145794,43146499-43146651,
43147383-43150081
Length = 1029
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/64 (31%), Positives = 30/64 (46%)
Frame = +2
Query: 107 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAERPVSLTRVRT 286
N DE++ D + ++ + + HG TL D+ AG AGA P+ LTRV +
Sbjct: 927 NRVSDELQAGQDHVKGLQ-AQIEKKLQHGGVTLPDADGPAAGAGAGATTPPPLPLTRVAS 985
Query: 287 NKTV 298
V
Sbjct: 986 KSKV 989
>06_03_0123 - 16924074-16926089
Length = 671
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 122 EIRGMMDK--KRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAERPVSLT 274
+ RG+ D+ +RN+ + SV+ L D+L AG++ G +RP S T
Sbjct: 55 DARGVFDEMPRRNVVSWSVLIAASSRLGVLGDALSLFAGMLRGGERDRPNSFT 107
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 161 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARA 253
N+ I HVDHGK+TLT ++ A+A
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEAGKAKA 99
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 161 NMSVIAHVDHGKSTLTDSLVSKAGIIA 241
N++++ HVD GKSTL+ L+ G I+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLGRIS 275
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 161 NMSVIAHVDHGKSTLTDSLVSKAGIIA 241
N++++ HVD GKSTL+ L+ G I+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLGRIS 275
>08_02_1553 +
27835320-27835364,27836853-27836966,27837062-27837457,
27837751-27837822,27837957-27838082,27838164-27838244,
27838364-27838558,27839018-27840013
Length = 674
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 236 IAGARAER-PVSLTRVRTNKTVASPLNLRPSLCSSSLKRKI*YSSQTL 376
+A ER P+S R R N +P N PS S+ ++ YS Q++
Sbjct: 578 LANPGGEREPLSAARSRNNPAAPAPTNAAPSSSSTLPSERLTYSGQSI 625
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 164 MSVIAHVDHGKSTLTDSL 217
++++ HVDHGK++L DSL
Sbjct: 200 VTIMGHVDHGKTSLLDSL 217
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/26 (42%), Positives = 20/26 (76%)
Frame = +2
Query: 164 MSVIAHVDHGKSTLTDSLVSKAGIIA 241
++++ HVDHGK+TL D + K+ ++A
Sbjct: 430 VTIMGHVDHGKTTLLD-YIRKSKVVA 454
>05_04_0199 + 18980017-18980759,18981478-18981532
Length = 265
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/40 (32%), Positives = 15/40 (37%)
Frame = +1
Query: 127 PWDDGQEAEYPQHVCDRPRRSRQVNPHGLVGFQGRYHCWC 246
PW GQ P + C R R P+G R C C
Sbjct: 190 PWKGGQGGNNPDYECLRAELRRMAPPNGRAVLLFRNRCGC 229
>09_02_0071 - 3877231-3877807,3880716-3880722,3880723-3881000,
3881287-3883916
Length = 1163
Score = 28.7 bits (61), Expect = 4.6
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 2/95 (2%)
Frame = +2
Query: 77 NKNHKPSKMVNFTVDEIRGMMDKKRNIRNMSVIAH-VDHGKSTLTDSLVSKAGIIAGARA 253
+K+H +K + +DE+ +M K I N+ V H +D + L S S+ +A A
Sbjct: 761 DKSHPMTKEIYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALL 820
Query: 254 ERPVSL-TRVRTNKTVASPLNLRPSLCSSSLKRKI 355
P RV+ N + ++ S+ + R+I
Sbjct: 821 STPPGAPIRVKKNLRICRDCHMAFKFISNIVSREI 855
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +1
Query: 574 LFMNKMGPWLFLSSNLKLKNYTRRSSVFXENVNVII 681
LF++K+GP L ++ L+N+ R + + +NV++
Sbjct: 277 LFVDKLGPHLVVAPLSTLRNWEREFATWAPQMNVVM 312
>01_06_1466 +
37559600-37559795,37560597-37560730,37561252-37561437,
37562538-37562753,37563008-37563119,37563493-37563663,
37564621-37564684,37565555-37565685,37566263-37566393,
37566843-37566945,37567322-37567398,37567813-37567860,
37568162-37568311,37568810-37569010
Length = 639
Score = 27.9 bits (59), Expect = 8.0
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -1
Query: 226 LGNQRVREG*LAVIDVGDHRHV-ADIPLLVHHPTDLVYREIHHFRWF 89
+GN+ +G A +D HRH+ A++PL PTD+ ++ F+WF
Sbjct: 585 IGNE---DGVAAAVD-SFHRHLPAELPL-APPPTDVKEEQLDFFQWF 626
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,473,493
Number of Sequences: 37544
Number of extensions: 317221
Number of successful extensions: 926
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 920
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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