Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060297.seq
(688 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 120 7e-28
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 66 2e-11
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 64 8e-11
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 64 8e-11
At5g25230.1 68418.m02991 elongation factor Tu family protein tra... 62 3e-10
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 52 3e-07
At5g13650.2 68418.m01585 elongation factor family protein contai... 49 3e-06
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 48 6e-06
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 48 6e-06
At5g13650.1 68418.m01584 elongation factor family protein contai... 47 1e-05
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 45 4e-05
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 44 1e-04
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 42 3e-04
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 33 0.23
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 33 0.23
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 33 0.23
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 33 0.23
At4g11610.1 68417.m01859 C2 domain-containing protein contains I... 31 0.95
At5g17810.1 68418.m02088 homeobox-leucine zipper transcription f... 30 1.7
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 30 1.7
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 30 1.7
At3g03660.1 68416.m00369 homeobox-leucine zipper transcription f... 29 2.9
At4g22970.1 68417.m03315 peptidase C50 family protein contains P... 28 5.0
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 28 5.0
At1g61430.1 68414.m06922 S-locus protein kinase, putative simila... 28 6.7
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 27 8.8
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 120 bits (290), Expect = 7e-28
Identities = 71/144 (49%), Positives = 90/144 (62%)
Frame = +1
Query: 256 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPXH 435
+ R TDTR DE +R ITIKST IS+++E+ ++ L T R +E +LINLIDSP H
Sbjct: 53 DVRMTDTRADEAERGITIKSTGISLYYEMTDESLKSFTGA--RDGNE--YLINLIDSPGH 108
Query: 436 VDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMGPWLFLSS 615
VDFSSEVTAALR+TD QTETVLRQA+ ERI+P+L +NKM FL
Sbjct: 109 VDFSSEVTAALRITDGALVVVDCIEGVCVQTETVLRQALGERIRPVLTVNKMDR-CFLEL 167
Query: 616 NLKLKNYTRRSSVFXENVNVIIAT 687
+ + + S EN NVI+AT
Sbjct: 168 QVDGEEAYQTFSRVIENANVIMAT 191
Score = 79.8 bits (188), Expect = 2e-15
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +2
Query: 101 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIA 241
MV FT DE+R +MD K NIRNMSVIAHVDHGKSTLTDSLV+ AGIIA
Sbjct: 1 MVKFTADELRRIMDYKHNIRNMSVIAHVDHGKSTLTDSLVAAAGIIA 47
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 66.1 bits (154), Expect = 2e-11
Identities = 48/141 (34%), Positives = 70/141 (49%)
Frame = +1
Query: 262 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPXHVD 441
RF D +EQ R IT+KS++IS+ + K + +NLIDSP H+D
Sbjct: 47 RFMDYLDEEQRRAITMKSSSISLKY--------------------KDYSLNLIDSPGHMD 86
Query: 442 FSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMGPWLFLSSNL 621
F SEV+ A R++D QT VLRQA E++ P L +NK+ +F
Sbjct: 87 FCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDRLIFELRLS 146
Query: 622 KLKNYTRRSSVFXENVNVIIA 684
++ YTR + E VN I++
Sbjct: 147 PMEAYTRLIRIVHE-VNGIVS 166
Score = 42.3 bits (95), Expect = 3e-04
Identities = 15/28 (53%), Positives = 23/28 (82%)
Frame = +2
Query: 149 RNIRNMSVIAHVDHGKSTLTDSLVSKAG 232
R +RN+ ++AHVDHGK+TL D L++ +G
Sbjct: 7 RKVRNICILAHVDHGKTTLADHLIASSG 34
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 64.1 bits (149), Expect = 8e-11
Identities = 38/113 (33%), Positives = 61/113 (53%)
Frame = +1
Query: 253 RETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPX 432
+ ++TDTR DEQ+R I+IK+ +S+ E D R KS +L N++D+P
Sbjct: 174 KHMKYTDTRVDEQERNISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPG 218
Query: 433 HVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKM 591
HV+FS E+TA+LR+ D TE +R AI + + ++ +NK+
Sbjct: 219 HVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKV 271
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 131 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIA--GARAERPVSLTRVRTNK 292
G+M +RN++++ H+ HGK+ D LV + ++ A+ E+ + T R ++
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDE 185
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 64.1 bits (149), Expect = 8e-11
Identities = 38/113 (33%), Positives = 61/113 (53%)
Frame = +1
Query: 253 RETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPX 432
+ ++TDTR DEQ+R I+IK+ +S+ E D R KS +L N++D+P
Sbjct: 174 KHMKYTDTRVDEQERNISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPG 218
Query: 433 HVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKM 591
HV+FS E+TA+LR+ D TE +R AI + + ++ +NK+
Sbjct: 219 HVNFSDEMTASLRLADGAVLIVDAAEGVMVNTERAIRHAIQDHLPIVVVINKV 271
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 131 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIA--GARAERPVSLTRVRTNK 292
G+M +RN++++ H+ HGK+ D LV + ++ A+ E+ + T R ++
Sbjct: 130 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFNAKNEKHMKYTDTRVDE 185
>At5g25230.1 68418.m02991 elongation factor Tu family protein
translation Elongation Factor 2, Schizosaccharomyces
pombe, PIR:T39902
Length = 973
Score = 62.5 bits (145), Expect = 3e-10
Identities = 38/113 (33%), Positives = 61/113 (53%)
Frame = +1
Query: 253 RETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPX 432
+ R+TDTR DEQ+R I+IK+ +S+ E D R KS +L N++D+P
Sbjct: 160 KHMRYTDTRVDEQERNISIKAVPMSLVLE------------DSRSKS---YLCNIMDTPG 204
Query: 433 HVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKM 591
+V+FS E+TA+LR+ D TE +R AI + + ++ +NK+
Sbjct: 205 NVNFSDEMTASLRLADGAVFIVDAAQGVMVNTERAIRHAIQDHLPIVVVINKV 257
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 131 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAE 256
G+M +RN++++ H+ HGK+ D LV + ++ AE
Sbjct: 116 GLMSNPALVRNVALVGHLQHGKTVFMDMLVEQTHRMSTFNAE 157
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 52.4 bits (120), Expect = 3e-07
Identities = 35/94 (37%), Positives = 48/94 (51%)
Frame = +1
Query: 310 KSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPXHVDFSSEVTAALRVTDXXX 489
+ TA + E E++ + IT+ +K IN+ID+P HVDF+ EV ALRV D
Sbjct: 131 EGTATMDWMEQEQERGITITSAATTTFWDK-HRINIIDTPGHVDFTLEVERALRVLDGAI 189
Query: 490 XXXXXXXXXXXQTETVLRQAIAERIKPILFMNKM 591
Q+ETV RQA + I F+NKM
Sbjct: 190 CLFDSVAGVEPQSETVWRQADKYGVPRICFVNKM 223
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +2
Query: 149 RNIRNMSVIAHVDHGKSTLTDSLVSKAG 232
++ RN+ ++AH+D GK+T T+ ++ G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 49.2 bits (112), Expect = 3e-06
Identities = 19/48 (39%), Positives = 35/48 (72%)
Frame = +2
Query: 92 PSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGI 235
PS +V+ + +D++ N+RN++++AHVDHGK+TL DS++ +A +
Sbjct: 62 PSTAEPASVEVKKKQLDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKV 109
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +1
Query: 397 KGFLINLIDSPXHVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPIL 576
K +N+ID+P H DF EV L + D QT VL++A+ ++
Sbjct: 144 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVV 203
Query: 577 FMNKM 591
+NK+
Sbjct: 204 VVNKI 208
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +1
Query: 397 KGFLINLIDSPXHVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPIL 576
K + +N+ID+P HVDF+ EV ALRV D Q+ TV RQ + +
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRVA 190
Query: 577 FMNK---MG--PWLFLS-SNLKLKNYT 639
F+NK MG PW L+ + KL++++
Sbjct: 191 FINKLDRMGADPWKVLNQARAKLRHHS 217
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 137 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 238
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 48.0 bits (109), Expect = 6e-06
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +1
Query: 397 KGFLINLIDSPXHVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPIL 576
K + +N+ID+P HVDF+ EV ALRV D Q+ TV RQ + +
Sbjct: 131 KDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRVA 190
Query: 577 FMNK---MG--PWLFLS-SNLKLKNYT 639
F+NK MG PW L+ + KL++++
Sbjct: 191 FINKLDRMGADPWKVLNQARAKLRHHS 217
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +2
Query: 137 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 238
MDK +RN+ + AH+D GK+TLT+ ++ G I
Sbjct: 62 MDK---LRNIGISAHIDSGKTTLTERVLFYTGRI 92
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 47.2 bits (107), Expect = 1e-05
Identities = 16/33 (48%), Positives = 29/33 (87%)
Frame = +2
Query: 137 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGI 235
+D++ N+RN++++AHVDHGK+TL DS++ +A +
Sbjct: 76 LDRRDNVRNIAIVAHVDHGKTTLVDSMLRQAKV 108
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/65 (29%), Positives = 30/65 (46%)
Frame = +1
Query: 397 KGFLINLIDSPXHVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPIL 576
K +N+ID+P H DF EV L + D QT VL++A+ ++
Sbjct: 143 KNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEGPMPQTRFVLKKALEFGHAVVV 202
Query: 577 FMNKM 591
+NK+
Sbjct: 203 VVNKI 207
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 152 NIRNMSVIAHVDHGKSTLTDSLVSKAGII 238
NIRN S+IAH+DHGKSTL D L+ G +
Sbjct: 85 NIRNFSIIAHIDHGKSTLADKLLQVTGTV 113
Score = 36.3 bits (80), Expect = 0.019
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +1
Query: 403 FLINLIDSPXHVDFSSEVTAALRVTDXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFM 582
F +NLID+P HVDFS EV+ +L + QT + A+ ++ I +
Sbjct: 152 FCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLALENNLEIIPVL 211
Query: 583 NKM 591
NK+
Sbjct: 212 NKI 214
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +1
Query: 280 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQRXKSEKGFLINLIDSPXHVDFSSEVT 459
K +++R IT+K+ +MF+E + +D + G+L+NLID+P HVDFS EV+
Sbjct: 105 KLQRERGITVKAQTATMFYENKVED-----------QEASGYLLNLIDTPGHVDFSYEVS 153
Query: 460 AAL 468
+L
Sbjct: 154 RSL 156
Score = 42.7 bits (96), Expect = 2e-04
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2
Query: 155 IRNMSVIAHVDHGKSTLTDSLVSKAGII 238
IRN S+IAH+DHGKSTL D L+ G I
Sbjct: 66 IRNFSIIAHIDHGKSTLADRLMELTGTI 93
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 107 NFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAER 259
+FTV RG ++K+ N+ I HVDHGK+TLT +L I + A++
Sbjct: 63 SFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKK 113
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 137 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAER 259
M K++ N+ VI HVD GKST T L+ K G I ER
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIER 41
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 137 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAER 259
M K++ N+ VI HVD GKST T L+ K G I ER
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIER 41
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 137 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAER 259
M K++ N+ VI HVD GKST T L+ K G I ER
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIER 41
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = +2
Query: 137 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAER 259
M K++ N+ VI HVD GKST T L+ K G I ER
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIER 41
>At4g11610.1 68417.m01859 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1011
Score = 30.7 bits (66), Expect = 0.95
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -1
Query: 265 NGSLGSRTSNDTGLGNQRVREG*LAVIDVGDHRHVADIPLLVHHPT 128
NG LG + + D +G R+R L+ ++ G + PLLV HPT
Sbjct: 676 NGQLGEKGNRDVKIGKIRIR---LSTLETG-RIYTHSYPLLVLHPT 717
>At5g17810.1 68418.m02088 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana};
Length = 268
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 174 SPTSITASQPSRTRWFPRPVSLLVRE 251
SP+S T+++P R RW P+P +L+ E
Sbjct: 9 SPSS-TSTEPVRARWSPKPEQILILE 33
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +2
Query: 161 NMSVIAHVDHGKSTLTDSLVSKAGIIA 241
N++++ HVD GKSTL+ L+ G I+
Sbjct: 241 NLAIVGHVDSGKSTLSGRLLHLLGRIS 267
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 161 NMSVIAHVDHGKSTLTDSL 217
N+ I HVDHGK+TLT ++
Sbjct: 69 NVGTIGHVDHGKTTLTAAI 87
>At3g03660.1 68416.m00369 homeobox-leucine zipper transcription
factor family protein similar to to PRESSED FLOWER
(GP:17907768) {Arabidopsis thaliana}
Length = 199
Score = 29.1 bits (62), Expect = 2.9
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = +3
Query: 174 SPTSITASQPSRTRWFPRPVSLLVRE 251
S + T+++P R+RW P+P +L+ E
Sbjct: 20 SASGSTSAEPVRSRWSPKPEQILILE 45
>At4g22970.1 68417.m03315 peptidase C50 family protein contains Pfam
PF03568: Peptidase family C50
Length = 1773
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 327 RDGRRFNGDATVLFVLTRVSETGLSALAPAMIPALETNESV 205
R+ RFNGD + F V E SAL+ + E+NE++
Sbjct: 232 REAERFNGDLVISFCDLTVKEHYKSALSKDRVYKDESNENL 272
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 28.3 bits (60), Expect = 5.0
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 164 MSVIAHVDHGKSTLTDSL 217
++V+ HVDHGK++L D+L
Sbjct: 222 VTVMGHVDHGKTSLLDAL 239
>At1g61430.1 68414.m06922 S-locus protein kinase, putative similar
to receptor protein kinase [Ipomoea trifida]
gi|836954|gb|AAC23542; contains S-locus glycoprotein
family domain, Pfam:PF00954
Length = 806
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 6/32 (18%)
Frame = +1
Query: 232 YHCWCESRETRFTD------TRKDEQDRCITI 309
+ CWCE+RE F D + E RC+ I
Sbjct: 710 WECWCETREVNFLDQALADSSHPSEVGRCVQI 741
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.5 bits (58), Expect = 8.8
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +2
Query: 164 MSVIAHVDHGKSTLTD 211
++++ HVDHGK+TL D
Sbjct: 504 ITIMGHVDHGKTTLLD 519
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,365,919
Number of Sequences: 28952
Number of extensions: 257578
Number of successful extensions: 811
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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