Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060296.seq
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    25   0.77 
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.1  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    22   5.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   7.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   7.2  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.2  

>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 24.6 bits (51), Expect = 0.77
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -1

Query: 517 LFKLTPANYHFTTDQFICNY 458
           LF LT    H  TD+ IC Y
Sbjct: 10  LFALTTTQIHAATDKVICYY 29


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -1

Query: 601 FGSDFTCKSCGINNACKMQTF 539
           F + FTC  CG+  + K+  F
Sbjct: 495 FHNPFTCNMCGVECSDKVSFF 515


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 225  CRRCYTAIHLRSCSINFLANLYHK 296
            C  CY+ I  ++  +N    L HK
Sbjct: 1376 CDACYSTIEEKNLQVNESGKLIHK 1399


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 286 KLARKLIEHERKW 248
           K+ R LI+H+R W
Sbjct: 88  KIMRHLIDHKRDW 100


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 312 KFSNDVNGRF--NVTMRTSSGMHLLKNAQLALPNE 410
           +FS+ V  +   ++  R S+   LLKN  L+ P+E
Sbjct: 73  RFSSGVGRKAWKHLDFRNSATAELLKNPSLSSPDE 107


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 312 KFSNDVNGRF--NVTMRTSSGMHLLKNAQLALPNE 410
           +FS+ V  +   ++  R S+   LLKN  L+ P+E
Sbjct: 73  RFSSGVGRKAWKHLDFRNSATAELLKNPSLSSPDE 107


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 114 CLFRRQHNNFVFIFVYNLQNCR 49
           C+FR ++ N   +    LQN R
Sbjct: 167 CIFRGKYRNINLLLTEQLQNRR 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,338
Number of Sequences: 336
Number of extensions: 3034
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)