BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NV060296.seq (688 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 24 5.2 AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 24 5.2 AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 23 9.0 >AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel protein. Length = 574 Score = 23.8 bits (49), Expect = 5.2 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +3 Query: 225 CRRCY---TAIHLRSCSINFLANLYHK 296 C R Y T + + +CSI F++N+Y K Sbjct: 59 CERAYFFLTFLVVTACSIYFISNVYIK 85 >AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium channel protein. Length = 572 Score = 23.8 bits (49), Expect = 5.2 Identities = 11/27 (40%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +3 Query: 225 CRRCY---TAIHLRSCSINFLANLYHK 296 C R Y T + + +CSI F++N+Y K Sbjct: 59 CERAYFFLTFLVVTACSIYFISNVYIK 85 >AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylcholine receptor subunitalpha 1 protein. Length = 557 Score = 23.0 bits (47), Expect = 9.0 Identities = 8/15 (53%), Positives = 12/15 (80%) Frame = +1 Query: 514 IIFNVVVAQKSAFYT 558 IIFN+ + +K+ FYT Sbjct: 229 IIFNITLRRKTLFYT 243 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 672,516 Number of Sequences: 2352 Number of extensions: 13835 Number of successful extensions: 23 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 23 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 69413730 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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