Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060294.seq
         (677 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113409-1|AAM29414.1|  525|Drosophila melanogaster RE13562p pro...    29   4.4  
AY060938-1|AAL28486.1|  277|Drosophila melanogaster GM08053p pro...    29   4.4  
AE014298-1174|AAF46370.2|  525|Drosophila melanogaster CG12125-P...    29   4.4  
AE014134-747|AAO41158.1|  138|Drosophila melanogaster CG33002-PA...    29   7.7  

>AY113409-1|AAM29414.1|  525|Drosophila melanogaster RE13562p
           protein.
          Length = 525

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 303 DDD*CNTLQNREFERSYSVDENDRARFLDRRPVIFQK 193
           D + C  +QN   E +Y++ E     FLD+R V+F++
Sbjct: 170 DSEFCREIQNL-LEMAYTLQEQSELLFLDQRSVLFRE 205


>AY060938-1|AAL28486.1|  277|Drosophila melanogaster GM08053p
           protein.
          Length = 277

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 303 DDD*CNTLQNREFERSYSVDENDRARFLDRRPVIFQK 193
           D + C  +QN   E +Y++ E     FLD+R V+F++
Sbjct: 170 DSEFCREIQNL-LEMAYTLQEQSELLFLDQRSVLFRE 205


>AE014298-1174|AAF46370.2|  525|Drosophila melanogaster CG12125-PA
           protein.
          Length = 525

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -3

Query: 303 DDD*CNTLQNREFERSYSVDENDRARFLDRRPVIFQK 193
           D + C  +QN   E +Y++ E     FLD+R V+F++
Sbjct: 170 DSEFCREIQNL-LEMAYTLQEQSELLFLDQRSVLFRE 205


>AE014134-747|AAO41158.1|  138|Drosophila melanogaster CG33002-PA
           protein.
          Length = 138

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 146 YLTSGR*YQNWDKTTCF*NMTGRRSRNLARSFSSTLYDRSNSRF 277
           Y+T      NWD T    N  GR+ +N+ + F + + +  + RF
Sbjct: 89  YVTCEAIDPNWDHTWIQRNYAGRQGQNIYKKFFNVVPENQHQRF 132


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,557,234
Number of Sequences: 53049
Number of extensions: 605802
Number of successful extensions: 1510
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)