Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060293.seq
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   3.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   3.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   3.0  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   7.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.0  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   9.3  
AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    21   9.3  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 7   EHTITSTTVASVIPKNY 57
           +H I  T VA V+P NY
Sbjct: 95  DHNIEITEVAPVLPGNY 111


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 7   EHTITSTTVASVIPKNY 57
           +H I  T VA V+P NY
Sbjct: 328 DHNIEITEVAPVLPGNY 344


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 7   EHTITSTTVASVIPKNY 57
           +H I  T VA V+P NY
Sbjct: 328 DHNIEITEVAPVLPGNY 344


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 404 LAKHVLGVVQCAQLGQTSPYKLFVANNC 321
           L K++  V     + + S Y LFVA+NC
Sbjct: 96  LLKNLKMVQNHNNIREKSHYCLFVASNC 123


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 404 LAKHVLGVVQCAQLGQTSPYKLFVANNC 321
           L K++  V     + + S Y LFVA+NC
Sbjct: 96  LLKNLKMVQNHNNIREKSHYCLFVASNC 123


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 134 DCILLKFKCVLRNEDI 87
           DCIL K KC    E++
Sbjct: 44  DCILEKGKCTPEGEEL 59


>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 415 SARAWQNTYSALYNVHSSAKRLLTNFSLPI 326
           S R   + +S   N H ++  LL + SLP+
Sbjct: 11  SGRTNGSNFSKFINCHYTSGHLLGSSSLPL 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,004
Number of Sequences: 336
Number of extensions: 2714
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)