Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060292.seq
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    26   0.33 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   4.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.4  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   7.2  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    21   7.2  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.2  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
 Frame = -2

Query: 242 HIDGEWEGGAVITEM*HSVTRGM---GSIIW*RHML 144
           H+D  W GGA+++     + +G+    S+ W  H L
Sbjct: 318 HVDAAWGGGALVSAKHRHLLKGIERADSVTWNPHKL 353


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 407 PDPFDSRRIQPDQQTEDPARNST 475
           P P  +   +P Q +E P  +ST
Sbjct: 401 PQPTQTTESEPTQASEQPTESST 423


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3

Query: 424 RVERIR*TILSTVSTVDSSSCERHGVSGSW 335
           RV  +R  I+ T+  V  + C R  ++G W
Sbjct: 734 RVSILRNIIVGTLMMVLGTGCVRIKITGVW 763


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +2

Query: 401 GSPDPFDSRRIQPDQQTED 457
           G+P P D  +  P++++E+
Sbjct: 59  GTPPPLDCSKNSPEKESEE 77


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 372 ESTVDTVLKMVHLIRSTRVEYNLTNKQKIRRETQRA 479
           +  +D  +KMV       +  +    QK+RRE ++A
Sbjct: 62  QKVMDYFIKMVKQKHKKDIRADKKALQKLRREVEKA 97


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -2

Query: 53  YDVNYGWPLTGLVF 12
           Y+  +GWP+  L+F
Sbjct: 214 YNSAFGWPIAFLIF 227


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,100
Number of Sequences: 336
Number of extensions: 3141
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)