Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060292.seq
         (687 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052099-1|AAK93523.1| 1049|Drosophila melanogaster SD04748p pro...    42   6e-04
AE013599-1656|AAM68598.1| 1049|Drosophila melanogaster CG4062-PB...    42   6e-04
AE013599-1655|AAF58412.1| 1049|Drosophila melanogaster CG4062-PA...    42   6e-04

>AY052099-1|AAK93523.1| 1049|Drosophila melanogaster SD04748p
           protein.
          Length = 1049

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +3

Query: 345 DTPWRSQELESTVDTVLKMVHLIRSTRVEYNLTNKQK 455
           +T WRS ++ES V+ V K   +IRS R +YNL NK K
Sbjct: 884 NTSWRSTKIESDVEFVQKAARIIRSARSDYNLPNKVK 920


>AE013599-1656|AAM68598.1| 1049|Drosophila melanogaster CG4062-PB,
           isoform B protein.
          Length = 1049

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +3

Query: 345 DTPWRSQELESTVDTVLKMVHLIRSTRVEYNLTNKQK 455
           +T WRS ++ES V+ V K   +IRS R +YNL NK K
Sbjct: 884 NTSWRSTKIESDVEFVQKAARIIRSARSDYNLPNKVK 920


>AE013599-1655|AAF58412.1| 1049|Drosophila melanogaster CG4062-PA,
           isoform A protein.
          Length = 1049

 Score = 42.3 bits (95), Expect = 6e-04
 Identities = 19/37 (51%), Positives = 25/37 (67%)
 Frame = +3

Query: 345 DTPWRSQELESTVDTVLKMVHLIRSTRVEYNLTNKQK 455
           +T WRS ++ES V+ V K   +IRS R +YNL NK K
Sbjct: 884 NTSWRSTKIESDVEFVQKAARIIRSARSDYNLPNKVK 920


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,908,314
Number of Sequences: 53049
Number of extensions: 590137
Number of successful extensions: 1380
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)