Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060291.seq
(694 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 71 9e-13
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 60 2e-09
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 57 1e-08
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 46 4e-05
SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 9e-05
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 44 2e-04
SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 40 0.001
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 40 0.001
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 38 0.006
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 38 0.010
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 38 0.010
SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.013
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.054
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.095
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 34 0.095
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 33 0.22
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 33 0.29
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.29
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 32 0.38
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 32 0.38
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 31 0.67
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 31 0.67
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 31 0.89
SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_15594| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.5
SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 30 2.0
SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3) 29 3.6
SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2) 29 3.6
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 29 4.7
SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37) 28 6.2
SB_17433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 28 6.2
SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 28 6.2
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 28 6.2
SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017) 28 6.2
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 28 8.3
SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5) 28 8.3
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 28 8.3
SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6) 28 8.3
SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7) 28 8.3
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 70.9 bits (166), Expect = 9e-13
Identities = 34/88 (38%), Positives = 55/88 (62%)
Frame = +2
Query: 245 GAPYHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK 424
G HF +GE++ V DP T RSRGF F+ FK P+++D V+ +G +++D KK
Sbjct: 123 GLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGA-----QELDGKK 177
Query: 425 AKARHGKIFVGGLSSEISDDEIRNFFSE 508
KIF+GGLS+ S+++++ +FS+
Sbjct: 178 MVTTTKKIFIGGLSTNTSEEDMKKYFSQ 205
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/84 (39%), Positives = 44/84 (52%)
Frame = +2
Query: 257 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 436
+F YGE+ +++K D TGR RGFAF+ FK D + I K R
Sbjct: 48 YFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAIDPKPAAPIG------KPPHLR 101
Query: 437 HGKIFVGGLSSEISDDEIRNFFSE 508
KIFVGGL E SD++IR +F +
Sbjct: 102 VKKIFVGGLKPETSDEKIREYFGK 125
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +1
Query: 517 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 675
+ E+E + + N+R+GFCF++F+SE V+ + +T I G +V+VKRA PK
Sbjct: 130 VKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRALPK 182
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 HFG-AYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 427
+FG AY ++ I T+ ++ R RGF F+ F + +++DK+ H I KV+ K+A
Sbjct: 122 YFGKAYAPVKEIEYITEHSSNRRRGFCFVSFDSEDTVDKICETQFHNIEGNKVEVKRA 179
Score = 36.7 bits (81), Expect = 0.018
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +3
Query: 150 GDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELR 254
G S D N DD KLFVGGLS+ETT + L+
Sbjct: 12 GTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLK 46
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +2
Query: 440 GKIFVGGLSSEISDDEIRNFFSE 508
GK+FVGGLS E + + ++ +FS+
Sbjct: 29 GKLFVGGLSYETTKESLKEYFSK 51
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/101 (29%), Positives = 62/101 (61%), Gaps = 12/101 (11%)
Frame = +2
Query: 245 GAPYHFGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPK 421
G +F +G I + + +K D GRSRGF F+ +++ +S+++V+ +H +++++++PK
Sbjct: 65 GLKDYFSQWGTIVDCVIMKRD---GRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEPK 121
Query: 422 K-----------AKARHGKIFVGGLSSEISDDEIRNFFSEL 511
+ A ++ KIFVGGL+S +++I+ +F+ L
Sbjct: 122 RSVPRDESGAPEAMSKTRKIFVGGLASTTVEEDIKEYFNSL 162
Score = 42.7 bits (96), Expect = 3e-04
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = +2
Query: 272 GEIESINVKTD-PNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAK 430
GE+ +++K D N R RGFAF+ F E ++KV A H I K+ + KKA+
Sbjct: 169 GEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAE 222
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 511 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 681
GTI V+ K + +GF F+T+ES VN++LK + +E++ KR+ P+ +
Sbjct: 74 GTI--VDCVIMKRDGRSRGFGFVTYESSDSVNEVLKKKDHVLDDREIEPKRSVPRDE 128
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/57 (28%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 508 IGTILEVEMPFDKTKNQR-KGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 675
+G +++V++ D+ +R +GF F+TF+++++V + I K+ +VK+A P+
Sbjct: 168 MGEVIDVDLKRDRDNPKRIRGFAFVTFDNDEIVEKVCAMKYHEIRMKQCEVKKAEPQ 224
Score = 30.7 bits (66), Expect = 1.2
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 201 RKLFVGGLSWETTDKELR 254
RK+F+GGL+W TT++ L+
Sbjct: 50 RKIFIGGLNWNTTEEGLK 67
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Frame = +2
Query: 257 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD-----PK 421
+F +GEI+ VK DPNT RSRGF F+ FK E V++ H I + + PK
Sbjct: 134 YFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLST-SHRIQGRLCEVRLPRPK 192
Query: 422 KAKARHGKIFVGGLSSEISDDEIRNFFSE 508
+ K+FVG L ++ + +F++
Sbjct: 193 EELNVPKKLFVGRLPESTTEKTLMEYFAQ 221
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 46.4 bits (105), Expect = 2e-05
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 15/100 (15%)
Frame = +2
Query: 257 HFGAYGEIESINVKTDPNTGRSRGFAFIVF---KAPESI--DKVMAAGEHTINNKKVDPK 421
+F AYGE+ + V D T +SRGF ++ F K ++ DKV G H I+ K+V+ K
Sbjct: 33 YFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKV-ENGAHRIDGKEVEVK 91
Query: 422 KAKARHG----------KIFVGGLSSEISDDEIRNFFSEL 511
+A R KIFVGGL + + ++I+ L
Sbjct: 92 RAIPRDDNSATSHEKTKKIFVGGLPEDATKEDIQEAIESL 131
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Frame = +1
Query: 511 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRT----IGGKEVDVKRATPKP 678
G + +V + D + +GF ++TF +V ++LK I GKEV+VKRA P+
Sbjct: 38 GELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPRD 97
Query: 679 D 681
D
Sbjct: 98 D 98
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 541 DKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 675
D+TK+ +GF F+ +E ++L K + GK V+ K+ATP+
Sbjct: 147 DETKH--RGFAFVELNNEDQADELCCVKKIHVKGKMVEAKKATPR 189
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 168 NSAEAPGRDDDRKLFVGGLSWETTDKELRIILE 266
N E D KLFVGGL+ ETT++ LR E
Sbjct: 3 NRQENTNNDPRAKLFVGGLNRETTNETLREYFE 35
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Frame = +3
Query: 93 FAQDITTDNQLNGNAENGGG--DSQDHNSAEAPGRDDD--------RKLFVGGLSWETTD 242
FA T N L ENG D ++ A RDD+ +K+FVGGL + T
Sbjct: 62 FADYKVTRNVLKDKVENGAHRIDGKEVEVKRAIPRDDNSATSHEKTKKIFVGGLPEDATK 121
Query: 243 KELRIILEHTVK*RV 287
++++ +E ++ +V
Sbjct: 122 EDIQEAIESLLEEKV 136
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2
Query: 302 DPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKAR 436
D T R RGF F+ F++ S DK H INNKKV+ KKA+ +
Sbjct: 5 DKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +1
Query: 538 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 675
FDK + +GF F+TFESE + T I K+V+VK+A PK
Sbjct: 4 FDKATQRHRGFGFVTFESENSADKACDTQYHLINNKKVEVKKAQPK 49
>SB_17242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 44.4 bits (100), Expect = 9e-05
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +1
Query: 520 LEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPDGPGG 693
LE++M D+ N+ KG+CF+ F +E +V+ L + GK+V++K+A G GG
Sbjct: 133 LEIKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKAADL--GAGG 188
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 12/95 (12%)
Frame = +2
Query: 263 GAYGEIESINVKTDPNTGRSRGFAFIVFK-APESIDKVMAAGE-HTINNKKVDPKKAKAR 436
G+ ++ S+++ P G+SR F F+ F + ID ++ E H+I+NK+V+ K+A R
Sbjct: 34 GSEADVSSVSLAKTPE-GKSRKFCFVEFSNGSDIIDNIVFNFESHSIDNKQVEVKRAMPR 92
Query: 437 HG----------KIFVGGLSSEISDDEIRNFFSEL 511
K+F+GGL E S+++++ + L
Sbjct: 93 DDPNELAHVRTKKLFIGGLKDEHSEEDVKTALAPL 127
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +2
Query: 287 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA 427
I + D T + +G+ F+ F +DK+ + K V+ KKA
Sbjct: 135 IKMVRDRETNKFKGYCFVNFPNEHIVDKLYLVRHIQVKGKDVEMKKA 181
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/65 (29%), Positives = 38/65 (58%)
Frame = +2
Query: 311 TGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEI 490
+G+S+GFAF+ + E+++ V+ +H I+N V +K + + K+ + + S I + +I
Sbjct: 79 SGKSKGFAFVRLRKKEAVESVLGRDDHVIDNSDVSMEK-QDTYRKVILKNIPSSIGESQI 137
Query: 491 RNFFS 505
FS
Sbjct: 138 LEHFS 142
Score = 31.1 bits (67), Expect = 0.89
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 511 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEV 651
G I V +P + +RKG C +TF S +++K K I G ++
Sbjct: 145 GEIASVYIPENLKTKERKGHCIVTFASVTEAFEVVKKRKHHIHGYDI 191
>SB_6474| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 21/82 (25%)
Frame = +2
Query: 323 RGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKA---------------------KARH 439
+GF F+ F+ P +I+ V+A H ++ K +DPK A A
Sbjct: 142 KGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPRGPGQQAQTGAVMGGPQRGSAND 201
Query: 440 GKIFVGGLSSEISDDEIRNFFS 505
GK+F+GGL+ ++++++ +FS
Sbjct: 202 GKVFIGGLAFGTTEEDLKEYFS 223
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = +1
Query: 538 FDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPDGPG 690
F++ KGF F+TF + +L + GK +D K A P+ GPG
Sbjct: 134 FERRARMLKGFGFVTFRDPATIESVLAKKPHILDGKTIDPKPAVPR--GPG 182
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/23 (43%), Positives = 19/23 (82%)
Frame = +3
Query: 186 GRDDDRKLFVGGLSWETTDKELR 254
G +D K+F+GGL++ TT+++L+
Sbjct: 197 GSANDGKVFIGGLAFGTTEEDLK 219
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Frame = +2
Query: 272 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK----AKAR- 436
GEI ++ DP TG ++GFAF F S + + T+N+K + P + K+R
Sbjct: 177 GEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAIT----TLNDKDIRPGRRLAICKSRS 232
Query: 437 HGKIFVGGLSSEISDDEIRNFFSEL 511
+ ++FV G+ S +EI FS++
Sbjct: 233 NSRLFVKGIPKRKSKEEIFQEFSKV 257
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDK-VMAAGEHTINNK--KVD---PK 421
FG G + S + D TG+S G+AF+ + P+ +K V + NK KV P
Sbjct: 47 FGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVREMNGARLQNKTLKVSFARPS 106
Query: 422 KAKARHGKIFVGGLSSEISDDEIRNFF 502
+ ++ +++ GL ++ ++E+ F
Sbjct: 107 STEIKNANLYISGLPKDMKEEEVEALF 133
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 40.7 bits (91), Expect = 0.001
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +2
Query: 233 DHR*GAPYHFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 364
D+ GA H A G +E++ + TD NTG+ R F F+ F +P S+
Sbjct: 469 DYERGAINHSNA-GPLENVRIPTDKNTGQQRSFGFVEFSSPVSV 511
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV--DPK 421
FG YG IE +++ TG+S+GF ++ ++ ES + + AG H I+ K V +PK
Sbjct: 83 FGPYGAIEDLSI-IRTQTGKSKGFGYVTYENAESAQRAL-AGTHIIDGKWVIAEPK 136
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 40.3 bits (90), Expect = 0.001
Identities = 14/52 (26%), Positives = 30/52 (57%)
Frame = +2
Query: 257 HFGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKV 412
+F YG++ +++ TD TG+S+G + + P +++K++ H I +V
Sbjct: 338 YFRPYGQVAKVHILTDRETGKSKGCGVVKLRHPGTVNKILEEPVHVIGKSQV 389
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 272 GEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARHGK 445
G+I S+ V TDP G+S+GF F+ F+ PE ++ + + +N K++ ++ A K
Sbjct: 133 GKIVSLKVMTDPE-GKSKGFGFVSFETPEEAEEAV----NVLNGKEIGGRRLWAGRAK 185
Score = 34.7 bits (76), Expect = 0.072
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 376
F YG I S V D + G S+GF F+ F +PE K +
Sbjct: 232 FSPYGTISSAKVMKD-DKGNSKGFGFVCFSSPEEATKAV 269
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 37.5 bits (83), Expect = 0.010
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 376
F YG ++++++ TD SRGFA++ + PE +K +
Sbjct: 1177 FSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKAL 1215
Score = 32.7 bits (71), Expect = 0.29
Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 490 QKLLQ*IGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVKRA 666
Q++ G + V++P D+T N +GF ++ + + E+ L I G+E+ V+
Sbjct: 1174 QEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMDGGQIDGQEIAVQSV 1233
Query: 667 TP 672
P
Sbjct: 1234 LP 1235
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 37.5 bits (83), Expect = 0.010
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +2
Query: 281 ESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 376
E++N+ TD TGR RGF F+ F + E ++K +
Sbjct: 123 EAVNIITDRETGRPRGFGFVTFGSKEEMEKAI 154
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 541 DKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRATPKPDGPGG 693
D+ + +GF F+TF S E++ + + + + G+ + V A P+ D GG
Sbjct: 130 DRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEAKPRGDSGGG 181
>SB_10895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 37.1 bits (82), Expect = 0.013
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = -2
Query: 387 SPAAMTLSIDSGALNTMKANPRDLPVFGSVFTLILSISPYAPK*YGAPYLWSPSSAHQQK 208
SP A++ +D G +A +++P F TL L + P+A +G P ++PSS H++
Sbjct: 371 SPDALSKGLDMGWGALSRAGVQEMPAFP---TLRLPLHPFASTGFGTPAFYNPSSYHRE- 426
Query: 207 VFCRHRVLGP 178
+ VLGP
Sbjct: 427 ---YYPVLGP 433
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 35.1 bits (77), Expect = 0.054
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 284 SINVKTDPNTGRSRGFAFIVFKAPESIDKVM 376
S+ V TD TGR RGF F+ F + + +DK +
Sbjct: 37 SVKVITDRETGRPRGFGFVTFGSEDEMDKAI 67
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 517 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGGKEVDVKRATPKPDGPGG 693
+L V++ D+ + +GF F+TF SE ++ + K + G+ + V +A P+ + GG
Sbjct: 35 LLSVKVITDRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKAQPRGERGGG 94
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/60 (23%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 517 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGGKEVDVKRATPKPDGPGG 693
+++V++ D+ + +GF F+TF S++ + D + + + G+ + V +A + GG
Sbjct: 255 VVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEFDGRSMKVNQARSREQRGGG 314
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKV---MAAGEHTINNKKVDPKKAK 430
F Y ++ + V +D T R RGFAF+ F + ++++ + E + KV+ +++
Sbjct: 250 FSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDGQEFDGRSMKVNQARSR 308
Query: 431 ARHGKIFVGGLSS 469
+ G GG S
Sbjct: 309 EQRGGGRGGGYRS 321
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 34.3 bits (75), Expect = 0.095
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKK----- 424
F G I + DP +G ++GFAF F + + ++NK++ P K
Sbjct: 172 FEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAV----KKLDNKEIRPGKRLGVC 227
Query: 425 AKARHGKIFVGGLSSEISDDEIRNFFSEL 511
+ ++FVG + S EI FS++
Sbjct: 228 ISVANSRLFVGSIPKTKSKQEILEEFSKV 256
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 34.3 bits (75), Expect = 0.095
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 275 EIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 376
++ + V TD TGR RGF F+ F + E ++K +
Sbjct: 29 DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAI 62
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +1
Query: 517 ILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTPKRTIGGKEVDVKRATPKPD-GPG 690
+++V++ D+ + +GF F+TF S E++ + + + G+ + V +A P+ + G G
Sbjct: 30 VVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDFDGRPMKVNQAQPRGERGAG 89
Query: 691 G 693
G
Sbjct: 90 G 90
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 33.9 bits (74), Expect = 0.13
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 523 EVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLKTPKRTIGGKEVDVKRATPK 675
EV + D KN+ KGF F++F E + + TIGGK+V A K
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARK 592
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +2
Query: 287 INVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH-TINNKKV 412
+ V DP +S+GF F+ F E K +A + TI K+V
Sbjct: 542 VRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQV 584
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 269 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 361
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 511 GTILEVEMPFDKTKNQRKGFCFITFESEQ 597
G I+ V + DK ++KGFCF+ +E ++
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 439
F G + V +P G SRGFAF+ + E +K G+ N ++V+ + +
Sbjct: 226 FSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEK----GQRAHNGRQVEGSNIRVAY 281
Query: 440 G 442
G
Sbjct: 282 G 282
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 33.1 bits (72), Expect = 0.22
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 269 YGEIESINVKTDPNTGRSRGFAFIVFKAPES 361
YGEI ++N+ D TG+ +GF F+ ++ S
Sbjct: 2 YGEIVNVNLVRDKKTGKQKGFCFLCYEDQRS 32
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 511 GTILEVEMPFDKTKNQRKGFCFITFESEQ 597
G I+ V + DK ++KGFCF+ +E ++
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQR 31
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVM 376
F YG++ I + D NT SRGFAF+ F + M
Sbjct: 36 FKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDAM 74
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 32.7 bits (71), Expect = 0.29
Identities = 27/112 (24%), Positives = 52/112 (46%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 439
F +G++ +++ + G +GFAFI F++ + + V+ KK + K+ +
Sbjct: 108 FSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQMFNRESKTKK-EEKREPSID 166
Query: 440 GKIFVGGLSSEISDDEIRNFFSELELS*KWRCPLTKQRTKERASVSSHLNLS 595
K + S+ ++ + S+L LS R ++RT SV S+ N S
Sbjct: 167 DKTKIKKRRRSHSESDLES--SKLSLSQSER---KRRRTTSETSVDSNENAS 213
Score = 31.9 bits (69), Expect = 0.51
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 490 QKLLQ*IGTILEVEMPFDKTKNQRKGFCFITFESEQ 597
+K+ G +L V +P K + KGF FI FES+Q
Sbjct: 105 KKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQ 140
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 32.7 bits (71), Expect = 0.29
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 382
F YG++ + + D T SRG AFI+F +S +AA
Sbjct: 30 FERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAA 70
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/75 (18%), Positives = 34/75 (45%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVDPKKAKARH 439
F G +ES+ + D TG +GF +++F++ +++ + +K+ +K +
Sbjct: 76 FTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIRVFPSKDKP 135
Query: 440 GKIFVGGLSSEISDD 484
F+ + D+
Sbjct: 136 QTEFISHIQVRFRDN 150
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 511 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKP 678
G + V + D+ KGF ++ FES+ V LK G+++ V + KP
Sbjct: 80 GNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFALKMNNAEFKGRKIRVFPSKDKP 135
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Frame = +2
Query: 260 FGAYGEI-ESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA--GEHTIN 400
F A+G I ++ + D +TG S+GFAFI F + ++ D + A G++ N
Sbjct: 120 FSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCN 169
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFI---VFKAPESIDKVMAAGEHTINNKKVD 415
F YGEI++++V D TG +G+A + FK +S + + E N VD
Sbjct: 313 FSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEALNGAEMLGQNISVD 367
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 511 GTILEVEMPFDKTKNQRKGFCFITFE-SEQVVNDLLKTPKRTIGGKEVDVKRATP 672
G I +V++P D T ++ +GF F+ FE +E + + + G+ + V A P
Sbjct: 29 GDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMNESELFGRTIRVNLAKP 83
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPE 358
F +G+I + + D T + RGF F+ F+ E
Sbjct: 25 FIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAE 57
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 31.5 bits (68), Expect = 0.67
Identities = 11/37 (29%), Positives = 24/37 (64%)
Frame = +1
Query: 511 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 621
G + +V++ +D + Q KGFCF+T +++ + ++T
Sbjct: 299 GIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQT 335
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 31.5 bits (68), Expect = 0.67
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESI 364
F +G +E +++ D +GRSRGF F++ ++ + I
Sbjct: 29 FEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQI 62
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 31.5 bits (68), Expect = 0.67
Identities = 11/41 (26%), Positives = 26/41 (63%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 382
F A+G++ ++ +P TG+ +G+ FI ++ +S + +A+
Sbjct: 219 FEAFGKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIAS 259
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPES 361
F +G I I++ DP + +GFAF+ + PE+
Sbjct: 122 FHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEA 155
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 511 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKR-TIGGKEVDVKRATPKP 678
G ++ + + + KG+ FI +E++Q ND + + +GG+ + V RA P
Sbjct: 223 GKVVHCSLSKEPMTGKHKGYGFIEYENQQSANDAIASMNLFDLGGQFLRVGRAITPP 279
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 31.1 bits (67), Expect = 0.89
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAA 382
F +G+I V D T S+G AF+ +++ ES+ + +AA
Sbjct: 436 FKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAESVTQCLAA 476
>SB_41060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 84 NDNFAQDITTDNQLNGNAENGGGDSQDH-NSAEAPGRDDD 200
ND+ DI D+ NGN + G D+ D N E G DDD
Sbjct: 20 NDDDGDDIDDDDG-NGNGNDNGDDNDDDDNDDEGNGDDDD 58
>SB_15594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 672
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -3
Query: 692 PPGPSGFGVARFTSTSXPPIVLL---GVLSKSFTTCSDSNVMKQKPFLWFFVLSK 537
P G +G G+ R++S S P G +S S+T V ++ FL FFVL K
Sbjct: 383 PIGVNGSGITRYSSLSVPFYCKFSSHGDVSLSYTIKKSVPVWHEEKFLSFFVLYK 437
>SB_24418| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 705
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = +3
Query: 81 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDDRKL--------FVGGLSWE 233
NN+N D +DN + N++N ++ D+N+ R D ++ ++ GL+WE
Sbjct: 613 NNNNNNNDNNSDNNSDNNSDNNSDNNSDNNNDNNSERGADPEIKRGKNPEGWIRGLNWE 671
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 81 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 200
NNDN + + +N N N N ++ D+NS + D
Sbjct: 597 NNDNNSDNNNNNNNNNNNNNNNNDNNSDNNSDNNSDNNSD 636
>SB_2941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 152
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +3
Query: 81 NNDNFAQDITTDNQLNGNAE----NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKE 248
+ND D D+++NG + N GGD D + + DDD + G S++ D +
Sbjct: 58 DNDGGDDDDDDDDEVNGGNDDDDFNNGGDCDDDDDDDDDDDDDDDDINKKGASYDDDDDD 117
>SB_28750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +3
Query: 81 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 200
NN+N + +N N N N ++ D NS E DDD
Sbjct: 18 NNNNNNNNNNNNNNNNNNNNNNNNNNNDDNSDEDDDDDDD 57
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 443 KIFVGGLSSEISDDEIRNFFSE 508
K+FVGG+ E DD +R FF++
Sbjct: 11 KLFVGGIPYESGDDALRKFFAQ 32
>SB_46941| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 81 NNDNFAQDITTDNQLNGNAE-NGGGDSQDHNS 173
NND+ D T D+ N N + NGGG D+N+
Sbjct: 193 NNDDDDDDDTDDDDHNNNDDDNGGGGDDDNNN 224
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 84 NDNFAQDITTDNQLN-GNAENGGGDSQDHNS 173
+DNF DI+ D LN G A N + ++NS
Sbjct: 335 HDNFNDDISNDGNLNGGGANNNNNKNNNYNS 365
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 538 FDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGGKEVDVKRATPKPDGPG 690
FD+ + +GF F+ ++ + +L + + G++V + A+P+ +G G
Sbjct: 319 FDRESGESRGFGFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFASPRTEGGG 370
>SB_18026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 621
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +2
Query: 278 IESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEHTINNKKVD 415
I+ + K+ N G++ G AF+VFK+ K + I ++ ++
Sbjct: 361 IDLLKHKSGKNQGKNTGVAFVVFKSNNDASKALKMDRSYIGHRYIE 406
>SB_14704| Best HMM Match : Mak16 (HMM E-Value=9.3)
Length = 189
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 81 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 200
NN+N +I +N N N N ++ ++N+ + DDD
Sbjct: 112 NNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNDDDDDDDD 151
>SB_1073| Best HMM Match : Ribosomal_L12 (HMM E-Value=2.2)
Length = 244
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/41 (29%), Positives = 22/41 (53%)
Frame = +3
Query: 78 ANNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 200
A N+ +A+ +T +N N N N ++ ++N+ DDD
Sbjct: 160 AINEKYAKIMTDNNNNNNNNNNNNNNNNNNNNNNNNNNDDD 200
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 278 IESINVKTDPNTGRSRGFAFIVFKAPES 361
+ + V TD TGR RGF F+ +A ++
Sbjct: 107 VVDVRVITDRETGRPRGFGFVTLEAKKT 134
>SB_55491| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 81 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 200
++DN D DN NG+ ++ D D + +A DDD
Sbjct: 61 DSDNNYDDNDDDNDDNGDDDDNDDDDDDDDDDDADDDDDD 100
>SB_24568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1109
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 87 DNFAQDITTDNQLNGNAENGG-GDSQDHNSAEAPGRDDD 200
D + D D+ + + +N G GD D+ AE G DDD
Sbjct: 821 DYYYDDDDDDDDDDDDGDNDGDGDGDDYGDAENYGEDDD 859
>SB_18084| Best HMM Match : DUF801 (HMM E-Value=0.37)
Length = 599
Score = 28.3 bits (60), Expect = 6.2
Identities = 9/30 (30%), Positives = 22/30 (73%)
Frame = +3
Query: 84 NDNFAQDITTDNQLNGNAENGGGDSQDHNS 173
ND+ A D++ ++ + G+ +NGG D+ ++++
Sbjct: 180 NDDSASDVSIEDIIYGDDDNGGDDNDNYDN 209
>SB_17433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1924
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 269 MLQNDTELLICGLPAQPTNKKFSVVIASWGLSTVMILRI 153
++QN TE ++ GL T + F V + +W LS + L++
Sbjct: 1631 VVQNPTENIVLGLLEDFTGRNFYVFMDNWFLSINLFLQL 1669
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 28.3 bits (60), Expect = 6.2
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVF 346
F G++ + + +D N+ RS+G A+I F
Sbjct: 166 FSKVGQVSDVRIISDRNSRRSKGIAYIEF 194
>SB_42035| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 415
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -3
Query: 203 SVVIASWGLSTVMILRITATVLCISIKLV 117
++++ S G++ L ITAT+LC SI L+
Sbjct: 267 TILLESSGVTLPKALHITATILCYSISLL 295
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 141 NGGGDSQDHNSAEAPGRDDDRKLFVGGLSWETTDKELRIILEHTVK*RVLM 293
NGG + D + A R++ +LFV GL E ++ +LR I V V M
Sbjct: 603 NGGKSTDDASDAAYELRNEGVELFVVGLGDENSEAQLREIASVPVIDHVFM 653
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 260 FGAYGEIESINVKTDPNTGRSRGFAFIVFKAPESIDKVMAAGEH 391
F +G + I + + RS+G+AF+ F A + + K+ A H
Sbjct: 118 FEQFGTVNRIRLSRSKKSARSKGYAFVEF-ACDEVAKIAADTMH 160
>SB_7529| Best HMM Match : Toxin_29 (HMM E-Value=0.0017)
Length = 691
Score = 28.3 bits (60), Expect = 6.2
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +3
Query: 81 NNDNFAQDITTDNQLNGNAENGGGDSQD 164
+++++A D DN +NG+ ++GGGD D
Sbjct: 585 DDEDYAGD--GDNDVNGDGDSGGGDDDD 610
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 195 DDRKLFVGGLSWETTDKELRII 260
DDRKLFVG +S +++LR++
Sbjct: 212 DDRKLFVGMISKHAKEEDLRVM 233
>SB_56987| Best HMM Match : Cornifin (HMM E-Value=1.5)
Length = 752
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +3
Query: 156 SQDHNSAEAPGRDD-DRKLFVGGLSWETTDKELRI 257
S DHN +PG DD +R++ L ++ + E+R+
Sbjct: 113 SPDHNDLTSPGHDDNEREVIQDSLPIDSPENEVRL 147
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 511 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 612
G + E ++ DK KG+ FITFES++V + L
Sbjct: 32 GVVKESKIVRDK-HGVSKGYAFITFESQEVADGL 64
>SB_46960| Best HMM Match : Neuromodulin (HMM E-Value=3.6)
Length = 557
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 81 NNDNFAQDITTDNQLNGNAENGGGDSQDHNSAEAPGRDDD 200
+N+N +DI N EN GG+S + N + DD+
Sbjct: 147 SNNNEDEDIQEVEDDNEGKENDGGESDEENDDDDEDGDDE 186
>SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 558
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = +2
Query: 269 YGEIESINVK---TDPNTGRSRGFAFIVFKAPESIDKVM 376
+GEIE PN G RG+ F+ FK E K +
Sbjct: 410 FGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDARKAL 448
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 266 AYGEIESINVKTDPNTGRSRGFAF 337
++GE+ + N+ D TG S+G+AF
Sbjct: 695 SFGELRAFNLVKDSATGLSKGYAF 718
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/32 (43%), Positives = 17/32 (53%), Gaps = 2/32 (6%)
Frame = +3
Query: 81 NNDNFAQDITTDNQLNGN--AENGGGDSQDHN 170
NNDN+ + DN N N NG DS D+N
Sbjct: 90 NNDNYDNNGNNDNNDNYNNYDNNGNNDSNDNN 121
>SB_2375| Best HMM Match : Pentapeptide_2 (HMM E-Value=2.7)
Length = 521
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 78 ANNDNFAQDITTDNQLNGNAENGGGD-SQDHNSAEAPGRDDDRK 206
+N+DN D +T N N N EN D S +NS + DD K
Sbjct: 103 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSDDSK 144
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 78 ANNDNFAQDITTDNQLNGNAENGGGD-SQDHNSAEAPGRDDDRK 206
+N+DN D +T N N N EN D S +NS + DD K
Sbjct: 289 SNSDNSNTDNSTSN--NSNPENSTSDNSNSNNSNQDNSNSDDSK 330
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,220,198
Number of Sequences: 59808
Number of extensions: 454604
Number of successful extensions: 2834
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 1403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2623
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1805522550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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