Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060289.seq
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    24   1.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    23   3.1  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    23   3.1  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.2  

>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
 Frame = +1

Query: 289 GMFVRLVHF*FQNETIKRTNAPVRSVV-YVILYVPCAILKFY------SXKRIIIF-HMV 444
           G+F  ++ F      + +T   V +V  +V  Y P A + FY      S + III  H V
Sbjct: 82  GLFC-ILKFALDGLMLDKTGICVSNVFDFVHFYYPVATMSFYVLNFFGSIQFIIISKHWV 140

Query: 445 FLFKHYMF*RERFMRNLG 498
            + K + F  E  MRN G
Sbjct: 141 TIMKEWSF-MEMSMRNYG 157


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/52 (25%), Positives = 28/52 (53%)
 Frame = +1

Query: 37  SIHLSYISCPVRSLTYIH*GEEETFVIGRINFLVLEILKFFICSLVLRVACV 192
           ++HL  + C +    Y+H      F+I  ++ L L  + +F C+L++ + C+
Sbjct: 249 TVHLLLLVC-IYYFYYMHLLFCCAFIIFTMHLLFLLCIYYFYCALII-LLCI 298


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 325 NETIKRTNAPVRSVVYVILYVPCAILKFY 411
           +ET    N  V+  VYVILY+   +   Y
Sbjct: 127 HETNLLRNVSVQFFVYVILYILATVFLAY 155


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +1

Query: 325 NETIKRTNAPVRSVVYVILYVPCAILKFY 411
           +ET    N  V+  VYVILY+   +   Y
Sbjct: 127 HETNLLRNVSVQFFVYVILYILATVFLAY 155


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +1

Query: 76  LTYIH*GEEETFVIGRINFLVLEILKFFICSLVLRV 183
           + YI   E ET   G +   VLE++    CS   RV
Sbjct: 249 IPYIQYTETETKTWGSVFNTVLELMPKHACSEYCRV 284


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,821
Number of Sequences: 336
Number of extensions: 2591
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)