Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060288.seq
(687 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic t... 161 6e-40
AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p pro... 160 2e-39
AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic i... 160 2e-39
AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB... 160 2e-39
AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA... 160 2e-39
AY121665-1|AAM51992.1| 709|Drosophila melanogaster RE10861p pro... 31 2.0
AE014296-2303|AAF49800.1| 709|Drosophila melanogaster CG10710-P... 31 2.0
AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD... 30 3.4
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 29 6.0
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 29 6.0
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 29 6.0
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 29 6.0
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 29 6.0
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 29 6.0
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 29 6.0
M28863-1|AAA62770.1| 543|Drosophila melanogaster seven-up prote... 29 7.9
BT029715-1|ABL75772.1| 614|Drosophila melanogaster IP17540p pro... 29 7.9
BT029676-1|ABL75733.1| 614|Drosophila melanogaster IP17340p pro... 29 7.9
BT029655-1|ABL75713.1| 614|Drosophila melanogaster IP17240p pro... 29 7.9
AY129452-1|AAM76194.1| 543|Drosophila melanogaster RE08410p pro... 29 7.9
AE014297-1474|AAN13541.1| 746|Drosophila melanogaster CG11502-P... 29 7.9
AE014297-1473|AAF54773.1| 543|Drosophila melanogaster CG11502-P... 29 7.9
>AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic
translation initiationfactor 5a protein.
Length = 159
Score = 161 bits (392), Expect = 6e-40
Identities = 73/92 (79%), Positives = 81/92 (88%)
Frame = +2
Query: 260 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 439
KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM D+GDLREDLK+P+G+LG QLR
Sbjct: 68 KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQLRL 127
Query: 440 DFDSGKELLCTVLKSCGEECVIASKXTQALDK 535
DFDSGK+LLCTVLK+CGEECVIA K ALDK
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
Score = 124 bits (299), Expect = 1e-28
Identities = 58/76 (76%), Positives = 64/76 (84%)
Frame = +3
Query: 57 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 236
M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 237 VGIDIFMVKSMKISVP 284
VGIDIF K + P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p
protein.
Length = 159
Score = 160 bits (388), Expect = 2e-39
Identities = 72/92 (78%), Positives = 81/92 (88%)
Frame = +2
Query: 260 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 439
KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR
Sbjct: 68 KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127
Query: 440 DFDSGKELLCTVLKSCGEECVIASKXTQALDK 535
DFDSGK+LLCTVLK+CGEECVIA K ALDK
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
Score = 121 bits (291), Expect = 1e-27
Identities = 57/76 (75%), Positives = 63/76 (82%)
Frame = +3
Query: 57 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 236
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 237 VGIDIFMVKSMKISVP 284
VGIDIF K + P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic
initiation factor 5A protein.
Length = 159
Score = 160 bits (388), Expect = 2e-39
Identities = 72/92 (78%), Positives = 81/92 (88%)
Frame = +2
Query: 260 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 439
KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR
Sbjct: 68 KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127
Query: 440 DFDSGKELLCTVLKSCGEECVIASKXTQALDK 535
DFDSGK+LLCTVLK+CGEECVIA K ALDK
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
Score = 124 bits (299), Expect = 1e-28
Identities = 58/76 (76%), Positives = 64/76 (84%)
Frame = +3
Query: 57 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 236
M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 237 VGIDIFMVKSMKISVP 284
VGIDIF K + P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB,
isoform B protein.
Length = 159
Score = 160 bits (388), Expect = 2e-39
Identities = 72/92 (78%), Positives = 81/92 (88%)
Frame = +2
Query: 260 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 439
KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR
Sbjct: 68 KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127
Query: 440 DFDSGKELLCTVLKSCGEECVIASKXTQALDK 535
DFDSGK+LLCTVLK+CGEECVIA K ALDK
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
Score = 121 bits (291), Expect = 1e-27
Identities = 57/76 (75%), Positives = 63/76 (82%)
Frame = +3
Query: 57 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 236
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 237 VGIDIFMVKSMKISVP 284
VGIDIF K + P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA,
isoform A protein.
Length = 159
Score = 160 bits (388), Expect = 2e-39
Identities = 72/92 (78%), Positives = 81/92 (88%)
Frame = +2
Query: 260 KKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRT 439
KKYEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+LG QLR
Sbjct: 68 KKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRL 127
Query: 440 DFDSGKELLCTVLKSCGEECVIASKXTQALDK 535
DFDSGK+LLCTVLK+CGEECVIA K ALDK
Sbjct: 128 DFDSGKDLLCTVLKACGEECVIAIKTNTALDK 159
Score = 121 bits (291), Expect = 1e-27
Identities = 57/76 (75%), Positives = 63/76 (82%)
Frame = +3
Query: 57 MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 236
M +++D FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1 MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59
Query: 237 VGIDIFMVKSMKISVP 284
VGIDIF K + P
Sbjct: 60 VGIDIFSNKKYEDICP 75
>AY121665-1|AAM51992.1| 709|Drosophila melanogaster RE10861p
protein.
Length = 709
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 208 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 56
P D+S +LH P S T L + + + A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602
>AE014296-2303|AAF49800.1| 709|Drosophila melanogaster CG10710-PA
protein.
Length = 709
Score = 30.7 bits (66), Expect = 2.0
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 208 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 56
P D+S +LH P S T L + + + A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602
>AE014296-410|ABI31230.1| 3651|Drosophila melanogaster CG33484-PD,
isoform D protein.
Length = 3651
Score = 29.9 bits (64), Expect = 3.4
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 49 TQQWVTSKTHTSRPETPGPQPPSPCNVRPCVKT 147
TQ +T+ T T+ + P P PP PC P V T
Sbjct: 2438 TQPTITNTTTTNTTKVPPPVPPKPCT--PVVAT 2468
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p
protein.
Length = 1521
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -1
Query: 543 GFILSRACVXFEAMTHSSPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 385
GF S + +P+D VHN + L++ V C G++ +R
Sbjct: 547 GFTGSGGSILSRRRCGKTPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 599
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -1
Query: 543 GFILSRACVXFEAMTHSSPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 385
GF S + +P+D VHN + L++ V C G++ +R
Sbjct: 1025 GFTGSGGSILSRRRCGKTPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1077
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -1
Query: 543 GFILSRACVXFEAMTHSSPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 385
GF S + +P+D VHN + L++ V C G++ +R
Sbjct: 1031 GFTGSGGSILSRRRCGKTPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -1
Query: 543 GFILSRACVXFEAMTHSSPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 385
GF S + +P+D VHN + L++ V C G++ +R
Sbjct: 974 GFTGSGGSILSRRRCGKTPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1026
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -1
Query: 543 GFILSRACVXFEAMTHSSPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 385
GF S + +P+D VHN + L++ V C G++ +R
Sbjct: 974 GFTGSGGSILSRRRCGKTPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1026
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -1
Query: 543 GFILSRACVXFEAMTHSSPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 385
GF S + +P+D VHN + L++ V C G++ +R
Sbjct: 1031 GFTGSGGSILSRRRCGKTPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 29.1 bits (62), Expect = 6.0
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = -1
Query: 543 GFILSRACVXFEAMTHSSPQDFSTVHNNSLPLSKSVRNCVPRSPSGILRSSRR 385
GF S + +P+D VHN + L++ V C G++ +R
Sbjct: 1031 GFTGSGGSILSRRRCGKTPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
>M28863-1|AAA62770.1| 543|Drosophila melanogaster seven-up protein
type 1 protein.
Length = 543
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 234 LVGIDIFMVKSMKISVPPHTTWTYP 308
L DI + +SM + VPPH+ W P
Sbjct: 22 LSAFDIGLSRSMGLGVPPHSAWHEP 46
>BT029715-1|ABL75772.1| 614|Drosophila melanogaster IP17540p
protein.
Length = 614
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +1
Query: 52 QQWVTSKTHTSR---PETPGPQPPSPCN 126
++W+ TH+S P +PGP P SP N
Sbjct: 5 KRWIYRHTHSSSSATPTSPGPPPVSPTN 32
>BT029676-1|ABL75733.1| 614|Drosophila melanogaster IP17340p
protein.
Length = 614
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +1
Query: 52 QQWVTSKTHTSR---PETPGPQPPSPCN 126
++W+ TH+S P +PGP P SP N
Sbjct: 5 KRWIYRHTHSSSSATPTSPGPPPVSPTN 32
>BT029655-1|ABL75713.1| 614|Drosophila melanogaster IP17240p
protein.
Length = 614
Score = 28.7 bits (61), Expect = 7.9
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Frame = +1
Query: 52 QQWVTSKTHTSR---PETPGPQPPSPCN 126
++W+ TH+S P +PGP P SP N
Sbjct: 5 KRWIYRHTHSSSSATPTSPGPPPVSPTN 32
>AY129452-1|AAM76194.1| 543|Drosophila melanogaster RE08410p
protein.
Length = 543
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 234 LVGIDIFMVKSMKISVPPHTTWTYP 308
L DI + +SM + VPPH+ W P
Sbjct: 22 LSAFDIGLSRSMGLGVPPHSAWHEP 46
>AE014297-1474|AAN13541.1| 746|Drosophila melanogaster CG11502-PA,
isoform A protein.
Length = 746
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 234 LVGIDIFMVKSMKISVPPHTTWTYP 308
L DI + +SM + VPPH+ W P
Sbjct: 22 LSAFDIGLSRSMGLGVPPHSAWHEP 46
>AE014297-1473|AAF54773.1| 543|Drosophila melanogaster CG11502-PB,
isoform B protein.
Length = 543
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 234 LVGIDIFMVKSMKISVPPHTTWTYP 308
L DI + +SM + VPPH+ W P
Sbjct: 22 LSAFDIGLSRSMGLGVPPHSAWHEP 46
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,194,811
Number of Sequences: 53049
Number of extensions: 702116
Number of successful extensions: 2327
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2323
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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