Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060285.seq
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein pro... 37 0.057
M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor... 37 0.057
BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfam... 37 0.057
BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfam... 37 0.057
L31785-1|AAA65937.1| 579|Homo sapiens orphan nuclear hormone re... 36 0.17
D16815-1|BAA20088.1| 579|Homo sapiens EAR-1r protein. 36 0.17
CR457434-1|CAG33715.1| 579|Homo sapiens NR1D2 protein. 36 0.17
BC070035-1|AAH70035.1| 408|Homo sapiens NR1D2 protein protein. 36 0.17
BC045613-1|AAH45613.1| 579|Homo sapiens nuclear receptor subfam... 36 0.17
AB209091-1|BAD92328.1| 549|Homo sapiens Orphan nuclear receptor... 36 0.17
L07592-1|AAA36469.1| 441|Homo sapiens peroxisome proliferator a... 33 1.2
DQ535395-1|ABF83338.1| 119|Homo sapiens circulating B cell anti... 33 1.2
BC007578-1|AAH07578.1| 361|Homo sapiens PPARD protein protein. 33 1.2
BC002715-1|AAH02715.1| 361|Homo sapiens PPARD protein protein. 33 1.2
AY919140-1|AAX14041.1| 441|Homo sapiens peroxisome proliferator... 33 1.2
AY442342-1|AAR05439.1| 441|Homo sapiens peroxisome proliferativ... 33 1.2
AL022721-9|CAD92505.1| 361|Homo sapiens peroxisome proliferativ... 33 1.2
AL022721-8|CAB38629.1| 441|Homo sapiens peroxisome proliferativ... 33 1.2
AF246303-1|AAF62553.1| 441|Homo sapiens peroxisome proliferativ... 33 1.2
BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein. 31 2.8
BC103949-1|AAI03950.1| 1068|Homo sapiens KCNT2 protein protein. 31 2.8
BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein. 31 2.8
BC103947-1|AAI03948.1| 370|Homo sapiens KCNT2 protein protein. 31 2.8
AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and chloride-ac... 31 2.8
AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel, subf... 31 2.8
AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel, subf... 31 2.8
AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel, subf... 31 2.8
AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel, subf... 31 2.8
AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel, subf... 31 2.8
AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel, subf... 31 2.8
AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel, subf... 31 2.8
AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel, subf... 31 2.8
AK131498-1|BAD18642.1| 1052|Homo sapiens protein ( Homo sapiens ... 31 2.8
AK127807-1|BAC87144.1| 523|Homo sapiens protein ( Homo sapiens ... 31 2.8
X63338-1|CAA44938.1| 175|Homo sapiens high sulfur keratin protein. 31 4.9
AL670729-3|CAH71673.1| 6620|Homo sapiens obscurin, cytoskeletal ... 31 4.9
AL359510-13|CAI15072.1| 6620|Homo sapiens obscurin, cytoskeletal... 31 4.9
AL353593-3|CAI19285.1| 6620|Homo sapiens obscurin, cytoskeletal ... 31 4.9
AJ314898-1|CAC85746.1| 646|Homo sapiens obscurin protein. 31 4.9
AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein. 31 4.9
>X72631-1|CAB53540.1| 614|Homo sapiens Rev-ErbAalpha protein
protein.
Length = 614
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +1
Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELVT 513
VRFGR+PKREK R+LA MQ + + ++ ++ L T
Sbjct: 203 VRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLET 239
>M24898-1|AAA52335.1| 614|Homo sapiens triiodothyronine receptor
protein.
Length = 614
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +1
Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELVT 513
VRFGR+PKREK R+LA MQ + + ++ ++ L T
Sbjct: 203 VRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLET 239
>BC056148-1|AAH56148.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +1
Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELVT 513
VRFGR+PKREK R+LA MQ + + ++ ++ L T
Sbjct: 203 VRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLET 239
>BC047875-1|AAH47875.1| 614|Homo sapiens nuclear receptor subfamily
1, group D, member 1 protein.
Length = 614
Score = 37.1 bits (82), Expect = 0.057
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +1
Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELVT 513
VRFGR+PKREK R+LA MQ + + ++ ++ L T
Sbjct: 203 VRFGRIPKREKQRMLAEMQSAMNLANNQLSSQCPLET 239
>L31785-1|AAA65937.1| 579|Homo sapiens orphan nuclear hormone
receptor BD73 protein.
Length = 579
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQ 489
VRFGR+PKREK R+L MQ + + + Q
Sbjct: 173 VRFGRIPKREKQRMLIEMQSAMKTMMNSQ 201
>D16815-1|BAA20088.1| 579|Homo sapiens EAR-1r protein.
Length = 579
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQ 489
VRFGR+PKREK R+L MQ + + + Q
Sbjct: 174 VRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202
>CR457434-1|CAG33715.1| 579|Homo sapiens NR1D2 protein.
Length = 579
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQ 489
VRFGR+PKREK R+L MQ + + + Q
Sbjct: 174 VRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202
>BC070035-1|AAH70035.1| 408|Homo sapiens NR1D2 protein protein.
Length = 408
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQ 489
VRFGR+PKREK R+L MQ + + + Q
Sbjct: 174 VRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202
>BC045613-1|AAH45613.1| 579|Homo sapiens nuclear receptor subfamily
1, group D, member 2 protein.
Length = 579
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQ 489
VRFGR+PKREK R+L MQ + + + Q
Sbjct: 174 VRFGRIPKREKQRMLIEMQSAMKTMMNSQ 202
>AB209091-1|BAD92328.1| 549|Homo sapiens Orphan nuclear receptor
NR1D2 variant protein.
Length = 549
Score = 35.5 bits (78), Expect = 0.17
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQ 489
VRFGR+PKREK R+L MQ + + + Q
Sbjct: 143 VRFGRIPKREKQRMLIEMQSAMKTMMNSQ 171
>L07592-1|AAA36469.1| 441|Homo sapiens peroxisome proliferator
activated receptor protein.
Length = 441
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 391 HNAPVRFGRVPKREKARILAAMQQSSSSRAHEQAA 495
HNA +RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 140 HNA-IRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
>DQ535395-1|ABF83338.1| 119|Homo sapiens circulating B cell
antibody heavy chain variable region protein.
Length = 119
Score = 32.7 bits (71), Expect = 1.2
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1
Query: 653 GASPELGCRVGGNSSRASGLAWKRR 579
GAS ++ CR G++S ASG++W R+
Sbjct: 17 GASVKVSCRASGDASTASGISWVRQ 41
>BC007578-1|AAH07578.1| 361|Homo sapiens PPARD protein protein.
Length = 361
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 391 HNAPVRFGRVPKREKARILAAMQQSSSSRAHEQAA 495
HNA +RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 140 HNA-IRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
>BC002715-1|AAH02715.1| 361|Homo sapiens PPARD protein protein.
Length = 361
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 391 HNAPVRFGRVPKREKARILAAMQQSSSSRAHEQAA 495
HNA +RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 140 HNA-IRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
>AY919140-1|AAX14041.1| 441|Homo sapiens peroxisome proliferator
activated receptor delta protein.
Length = 441
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 391 HNAPVRFGRVPKREKARILAAMQQSSSSRAHEQAA 495
HNA +RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 140 HNA-IRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
>AY442342-1|AAR05439.1| 441|Homo sapiens peroxisome proliferative
activated receptor, delta protein.
Length = 441
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 391 HNAPVRFGRVPKREKARILAAMQQSSSSRAHEQAA 495
HNA +RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 140 HNA-IRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
>AL022721-9|CAD92505.1| 361|Homo sapiens peroxisome proliferative
activated receptor, delta protein.
Length = 361
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 391 HNAPVRFGRVPKREKARILAAMQQSSSSRAHEQAA 495
HNA +RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 140 HNA-IRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
>AL022721-8|CAB38629.1| 441|Homo sapiens peroxisome proliferative
activated receptor, delta protein.
Length = 441
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 391 HNAPVRFGRVPKREKARILAAMQQSSSSRAHEQAA 495
HNA +RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 140 HNA-IRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
>AF246303-1|AAF62553.1| 441|Homo sapiens peroxisome proliferative
activated receptor delta protein.
Length = 441
Score = 32.7 bits (71), Expect = 1.2
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +1
Query: 391 HNAPVRFGRVPKREKARILAAMQQSSSSRAHEQAA 495
HNA +RFGR+P+ EK +++A + + S+ + Q A
Sbjct: 140 HNA-IRFGRMPEAEKRKLVAGLTANEGSQYNPQVA 173
>BC103950-1|AAI03951.1| 1111|Homo sapiens KCNT2 protein protein.
Length = 1111
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 587 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 638
>BC103949-1|AAI03950.1| 1068|Homo sapiens KCNT2 protein protein.
Length = 1068
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 537 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 588
>BC103948-1|AAI03949.1| 1111|Homo sapiens KCNT2 protein protein.
Length = 1111
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 587 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 638
>BC103947-1|AAI03948.1| 370|Homo sapiens KCNT2 protein protein.
Length = 370
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 198 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 249
>AY359444-1|AAR06170.1| 1135|Homo sapiens sodium- and
chloride-activated ATP-sensitive potassium channel
protein.
Length = 1135
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 587 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 638
>AL591604-2|CAH72932.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 587 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 638
>AL591604-1|CAH72933.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 587 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 638
>AL358853-2|CAH71958.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 587 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 638
>AL358853-1|CAH71957.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 587 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 638
>AL139137-2|CAI16092.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 587 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 638
>AL139137-1|CAI16091.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 587 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 638
>AL138931-2|CAI15624.1| 1111|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1111
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 587 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 638
>AL138931-1|CAI15623.1| 1135|Homo sapiens potassium channel,
subfamily T, member 2 protein.
Length = 1135
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 587 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 638
>AK131498-1|BAD18642.1| 1052|Homo sapiens protein ( Homo sapiens
cDNA FLJ16700 fis, clone TRACH3005211, moderately
similar to Rattus norvegicus potassium channel subunit
(Slack) (Slack). ).
Length = 1052
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 569 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 620
>AK127807-1|BAC87144.1| 523|Homo sapiens protein ( Homo sapiens
cDNA FLJ45908 fis, clone OCBBF3028001, moderately
similar to Rattus norvegicus potassium channel subunit
(Slack) (Slack). ).
Length = 523
Score = 31.5 bits (68), Expect = 2.8
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 613 VHELLASHGSDAITRELATCRDERAP-LAPSNRGASQVQRQLLARVHETTTT 461
VH ++AS G+ AI + +CR P L+ G+ +++R +A V E T
Sbjct: 408 VHSIIASMGTVAIDLQDTSCRSASGPTLSLPTEGSKEIRRPSIAPVLEVADT 459
>X63338-1|CAA44938.1| 175|Homo sapiens high sulfur keratin protein.
Length = 175
Score = 30.7 bits (66), Expect = 4.9
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = +3
Query: 378 CCEISQC--TCAIRSCTQTRESAYPRSDATVVVVSCTRASSCR*TCDAP 518
CC+ S C +C SC QT + S + +SC + S C +C P
Sbjct: 34 CCQPSCCETSCCQPSCCQTSFCDFLASQLVDLQLSCCQPSCCETSCCQP 82
>AL670729-3|CAH71673.1| 6620|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 6620
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 541 APLAPSNRGASQVQRQLLARVHETTTTVASLRGYALSRVWVHD 413
AP +N+ + R++LAR+HE +A L A + W+ D
Sbjct: 700 APGLTANKPPAAAAREVLARLHEEAQLLAELSDQAAAVTWLKD 742
>AL359510-13|CAI15072.1| 6620|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 6620
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 541 APLAPSNRGASQVQRQLLARVHETTTTVASLRGYALSRVWVHD 413
AP +N+ + R++LAR+HE +A L A + W+ D
Sbjct: 700 APGLTANKPPAAAAREVLARLHEEAQLLAELSDQAAAVTWLKD 742
>AL353593-3|CAI19285.1| 6620|Homo sapiens obscurin, cytoskeletal
calmodulin and titin-interacting RhoGEF protein.
Length = 6620
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 541 APLAPSNRGASQVQRQLLARVHETTTTVASLRGYALSRVWVHD 413
AP +N+ + R++LAR+HE +A L A + W+ D
Sbjct: 700 APGLTANKPPAAAAREVLARLHEEAQLLAELSDQAAAVTWLKD 742
>AJ314898-1|CAC85746.1| 646|Homo sapiens obscurin protein.
Length = 646
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 541 APLAPSNRGASQVQRQLLARVHETTTTVASLRGYALSRVWVHD 413
AP +N+ + R++LAR+HE +A L A + W+ D
Sbjct: 280 APGLTANKPPAAAAREVLARLHEEAQLLAELSDQAAAVTWLKD 322
>AJ002535-1|CAC44768.1| 6620|Homo sapiens obscurin protein.
Length = 6620
Score = 30.7 bits (66), Expect = 4.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 541 APLAPSNRGASQVQRQLLARVHETTTTVASLRGYALSRVWVHD 413
AP +N+ + R++LAR+HE +A L A + W+ D
Sbjct: 700 APGLTANKPPAAAAREVLARLHEEAQLLAELSDQAAAVTWLKD 742
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,029,256
Number of Sequences: 237096
Number of extensions: 1661808
Number of successful extensions: 5057
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 4931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5057
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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