Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060285.seq
         (674 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2992|AAN11689.1|  906|Drosophila melanogaster CG8127-PD...   102   4e-22
X51549-1|CAA35924.1| 1394|Drosophila melanogaster protein ( Dros...    64   1e-10
X51548-1|CAA35923.1| 1237|Drosophila melanogaster protein ( Dros...    64   1e-10
AE014296-2991|AAN11688.1| 1355|Drosophila melanogaster CG8127-PA...    64   1e-10
AE014296-2990|AAN11687.1| 1199|Drosophila melanogaster CG8127-PC...    64   1e-10
AE014296-2989|AAF49282.3| 1412|Drosophila melanogaster CG8127-PB...    64   1e-10
X15586-1|CAA33611.1| 1443|Drosophila melanogaster protein ( D.me...    33   0.27 

>AE014296-2992|AAN11689.1|  906|Drosophila melanogaster CG8127-PD,
           isoform D protein.
          Length = 906

 Score =  102 bits (245), Expect = 4e-22
 Identities = 59/109 (54%), Positives = 68/109 (62%)
 Frame = +1

Query: 337 MGEDLPILKGILNGVVKYHNAPVRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELVTL 516
           MGE+LPILKGIL G V YHNAPVRFGRVPKREKARILAAMQQS+ +R  ++A A EL   
Sbjct: 1   MGEELPILKGILKGNVNYHNAPVRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQ 60

Query: 517 LGCWARVVRAHLDTWRVHA*SRRFHARPEARELXPPTRQPNSGLAPLKP 663
               A V+RAHL+T       +    R  AR+  P    P     PL P
Sbjct: 61  PRLLAAVLRAHLETCEFTK-EKVSAMRQRARD-CPSYSMPTLLACPLNP 107


>X51549-1|CAA35924.1| 1394|Drosophila melanogaster protein (
           Drosophila mRNA forecdysone-inducible gene E75B. ).
          Length = 1394

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 41/87 (47%), Positives = 49/87 (56%)
 Frame = +1

Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELVTLLGCWARVVRAHLDTWRVHA*SR 582
           VRFGRVPKREKARILAAMQQS+ +R  ++A A EL       A V+RAHL+T       +
Sbjct: 473 VRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTK-EK 531

Query: 583 RFHARPEARELXPPTRQPNSGLAPLKP 663
               R  AR+  P    P     PL P
Sbjct: 532 VSAMRQRARD-CPSYSMPTLLACPLNP 557


>X51548-1|CAA35923.1| 1237|Drosophila melanogaster protein (
           Drosophila mRNA forecdysone-inducible gene E75A. ).
          Length = 1237

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 41/87 (47%), Positives = 49/87 (56%)
 Frame = +1

Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELVTLLGCWARVVRAHLDTWRVHA*SR 582
           VRFGRVPKREKARILAAMQQS+ +R  ++A A EL       A V+RAHL+T       +
Sbjct: 316 VRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTK-EK 374

Query: 583 RFHARPEARELXPPTRQPNSGLAPLKP 663
               R  AR+  P    P     PL P
Sbjct: 375 VSAMRQRARD-CPSYSMPTLLACPLNP 400


>AE014296-2991|AAN11688.1| 1355|Drosophila melanogaster CG8127-PA,
           isoform A protein.
          Length = 1355

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 41/87 (47%), Positives = 49/87 (56%)
 Frame = +1

Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELVTLLGCWARVVRAHLDTWRVHA*SR 582
           VRFGRVPKREKARILAAMQQS+ +R  ++A A EL       A V+RAHL+T       +
Sbjct: 472 VRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTK-EK 530

Query: 583 RFHARPEARELXPPTRQPNSGLAPLKP 663
               R  AR+  P    P     PL P
Sbjct: 531 VSAMRQRARD-CPSYSMPTLLACPLNP 556


>AE014296-2990|AAN11687.1| 1199|Drosophila melanogaster CG8127-PC,
           isoform C protein.
          Length = 1199

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 41/87 (47%), Positives = 49/87 (56%)
 Frame = +1

Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELVTLLGCWARVVRAHLDTWRVHA*SR 582
           VRFGRVPKREKARILAAMQQS+ +R  ++A A EL       A V+RAHL+T       +
Sbjct: 316 VRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTK-EK 374

Query: 583 RFHARPEARELXPPTRQPNSGLAPLKP 663
               R  AR+  P    P     PL P
Sbjct: 375 VSAMRQRARD-CPSYSMPTLLACPLNP 400


>AE014296-2989|AAF49282.3| 1412|Drosophila melanogaster CG8127-PB,
           isoform B protein.
          Length = 1412

 Score = 64.5 bits (150), Expect = 1e-10
 Identities = 41/87 (47%), Positives = 49/87 (56%)
 Frame = +1

Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELVTLLGCWARVVRAHLDTWRVHA*SR 582
           VRFGRVPKREKARILAAMQQS+ +R  ++A A EL       A V+RAHL+T       +
Sbjct: 529 VRFGRVPKREKARILAAMQQSTQNRGQQRALATELDDQPRLLAAVLRAHLETCEFTK-EK 587

Query: 583 RFHARPEARELXPPTRQPNSGLAPLKP 663
               R  AR+  P    P     PL P
Sbjct: 588 VSAMRQRARD-CPSYSMPTLLACPLNP 613


>X15586-1|CAA33611.1| 1443|Drosophila melanogaster protein (
           D.melanogaster 75B mRNAencoding hypothetical 75B
           protein. ).
          Length = 1443

 Score = 33.5 bits (73), Expect = 0.27
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = +1

Query: 403 VRFGRVPKREKARILAAMQQSSSSRAHEQAAAAELVTLLGCWARVVRAHLDT 558
           VRFGRVPKREKARI     ++    A    +    +T          AHL+T
Sbjct: 525 VRFGRVPKREKARIWRPCNRAPRIAASSDPSPPSWMTSHASSPPCCCAHLET 576


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,945,385
Number of Sequences: 53049
Number of extensions: 525940
Number of successful extensions: 1512
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1512
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)