Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060284.seq
(400 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80439-6|AAB37642.1| 564|Caenorhabditis elegans Ezrin/radixin/m... 162 7e-41
U80439-5|AAB37643.1| 563|Caenorhabditis elegans Ezrin/radixin/m... 162 7e-41
AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein. 162 7e-41
AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein. 162 7e-41
AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein. 162 7e-41
AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv prot... 162 7e-41
AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein. 162 7e-41
AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein. 162 7e-41
AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein. 162 7e-41
U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatos... 97 3e-21
U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatos... 97 3e-21
U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatos... 97 3e-21
Z69659-4|CAA93487.2| 396|Caenorhabditis elegans Hypothetical pr... 52 1e-07
Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical pr... 40 5e-04
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 39 0.002
U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain (pr... 36 0.011
U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain (pr... 36 0.011
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 36 0.014
AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical ... 31 0.23
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (... 31 0.40
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ... 31 0.40
AC024753-6|AAF60458.2| 407|Caenorhabditis elegans Hypothetical ... 28 2.1
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 27 3.7
AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical... 27 3.7
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 27 3.7
U64848-13|AAY86245.1| 339|Caenorhabditis elegans Hypothetical p... 26 8.7
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 26 8.7
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 26 8.7
>U80439-6|AAB37642.1| 564|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform b protein.
Length = 564
Score = 162 bits (394), Expect = 7e-41
Identities = 78/122 (63%), Positives = 88/122 (72%)
Frame = +2
Query: 11 EDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
E AM+EYLKIAQDLEMYGVNYFEIRNKK T+L+LGVDALGLNIY+K D+L+PK+GFPWSE
Sbjct: 187 EQAMLEYLKIAQDLEMYGVNYFEIRNKKGTDLYLGVDALGLNIYDKADRLSPKVGFPWSE 246
Query: 191 IRNISFNDRKFIIKPIDKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDTIDVQQ 370
IRNISFND+KF+IKPIDKKA KPDTI+VQQ
Sbjct: 247 IRNISFNDKKFVIKPIDKKAHDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQ 306
Query: 371 MK 376
MK
Sbjct: 307 MK 308
>U80439-5|AAB37643.1| 563|Caenorhabditis elegans
Ezrin/radixin/moesin protein 1,isoform a protein.
Length = 563
Score = 162 bits (394), Expect = 7e-41
Identities = 78/122 (63%), Positives = 88/122 (72%)
Frame = +2
Query: 11 EDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
E AM+EYLKIAQDLEMYGVNYFEIRNKK T+L+LGVDALGLNIY+K D+L+PK+GFPWSE
Sbjct: 186 EQAMLEYLKIAQDLEMYGVNYFEIRNKKGTDLYLGVDALGLNIYDKADRLSPKVGFPWSE 245
Query: 191 IRNISFNDRKFIIKPIDKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDTIDVQQ 370
IRNISFND+KF+IKPIDKKA KPDTI+VQQ
Sbjct: 246 IRNISFNDKKFVIKPIDKKAHDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQ 305
Query: 371 MK 376
MK
Sbjct: 306 MK 307
>AY643539-1|AAT66915.1| 566|Caenorhabditis elegans ERM-1C protein.
Length = 566
Score = 162 bits (394), Expect = 7e-41
Identities = 78/122 (63%), Positives = 88/122 (72%)
Frame = +2
Query: 11 EDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
E AM+EYLKIAQDLEMYGVNYFEIRNKK T+L+LGVDALGLNIY+K D+L+PK+GFPWSE
Sbjct: 186 EQAMLEYLKIAQDLEMYGVNYFEIRNKKGTDLYLGVDALGLNIYDKADRLSPKVGFPWSE 245
Query: 191 IRNISFNDRKFIIKPIDKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDTIDVQQ 370
IRNISFND+KF+IKPIDKKA KPDTI+VQQ
Sbjct: 246 IRNISFNDKKFVIKPIDKKAHDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQ 305
Query: 371 MK 376
MK
Sbjct: 306 MK 307
>AY643538-1|AAT66914.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 162 bits (394), Expect = 7e-41
Identities = 78/122 (63%), Positives = 88/122 (72%)
Frame = +2
Query: 11 EDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
E AM+EYLKIAQDLEMYGVNYFEIRNKK T+L+LGVDALGLNIY+K D+L+PK+GFPWSE
Sbjct: 186 EQAMLEYLKIAQDLEMYGVNYFEIRNKKGTDLYLGVDALGLNIYDKADRLSPKVGFPWSE 245
Query: 191 IRNISFNDRKFIIKPIDKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDTIDVQQ 370
IRNISFND+KF+IKPIDKKA KPDTI+VQQ
Sbjct: 246 IRNISFNDKKFVIKPIDKKAHDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQ 305
Query: 371 MK 376
MK
Sbjct: 306 MK 307
>AB107270-3|BAC98358.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 162 bits (394), Expect = 7e-41
Identities = 78/122 (63%), Positives = 88/122 (72%)
Frame = +2
Query: 11 EDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
E AM+EYLKIAQDLEMYGVNYFEIRNKK T+L+LGVDALGLNIY+K D+L+PK+GFPWSE
Sbjct: 187 EQAMLEYLKIAQDLEMYGVNYFEIRNKKGTDLYLGVDALGLNIYDKADRLSPKVGFPWSE 246
Query: 191 IRNISFNDRKFIIKPIDKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDTIDVQQ 370
IRNISFND+KF+IKPIDKKA KPDTI+VQQ
Sbjct: 247 IRNISFNDKKFVIKPIDKKAHDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQ 306
Query: 371 MK 376
MK
Sbjct: 307 MK 308
>AB107270-2|BAC98357.1| 566|Caenorhabditis elegans ERM-1Asv
protein.
Length = 566
Score = 162 bits (394), Expect = 7e-41
Identities = 78/122 (63%), Positives = 88/122 (72%)
Frame = +2
Query: 11 EDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
E AM+EYLKIAQDLEMYGVNYFEIRNKK T+L+LGVDALGLNIY+K D+L+PK+GFPWSE
Sbjct: 186 EQAMLEYLKIAQDLEMYGVNYFEIRNKKGTDLYLGVDALGLNIYDKADRLSPKVGFPWSE 245
Query: 191 IRNISFNDRKFIIKPIDKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDTIDVQQ 370
IRNISFND+KF+IKPIDKKA KPDTI+VQQ
Sbjct: 246 IRNISFNDKKFVIKPIDKKAHDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQ 305
Query: 371 MK 376
MK
Sbjct: 306 MK 307
>AB107270-1|BAC98356.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 162 bits (394), Expect = 7e-41
Identities = 78/122 (63%), Positives = 88/122 (72%)
Frame = +2
Query: 11 EDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
E AM+EYLKIAQDLEMYGVNYFEIRNKK T+L+LGVDALGLNIY+K D+L+PK+GFPWSE
Sbjct: 186 EQAMLEYLKIAQDLEMYGVNYFEIRNKKGTDLYLGVDALGLNIYDKADRLSPKVGFPWSE 245
Query: 191 IRNISFNDRKFIIKPIDKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDTIDVQQ 370
IRNISFND+KF+IKPIDKKA KPDTI+VQQ
Sbjct: 246 IRNISFNDKKFVIKPIDKKAHDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQ 305
Query: 371 MK 376
MK
Sbjct: 306 MK 307
>AB107269-1|BAC98355.1| 564|Caenorhabditis elegans ERM-1B protein.
Length = 564
Score = 162 bits (394), Expect = 7e-41
Identities = 78/122 (63%), Positives = 88/122 (72%)
Frame = +2
Query: 11 EDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
E AM+EYLKIAQDLEMYGVNYFEIRNKK T+L+LGVDALGLNIY+K D+L+PK+GFPWSE
Sbjct: 187 EQAMLEYLKIAQDLEMYGVNYFEIRNKKGTDLYLGVDALGLNIYDKADRLSPKVGFPWSE 246
Query: 191 IRNISFNDRKFIIKPIDKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDTIDVQQ 370
IRNISFND+KF+IKPIDKKA KPDTI+VQQ
Sbjct: 247 IRNISFNDKKFVIKPIDKKAHDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQ 306
Query: 371 MK 376
MK
Sbjct: 307 MK 308
>AB107268-1|BAC98354.1| 563|Caenorhabditis elegans ERM-1A protein.
Length = 563
Score = 162 bits (394), Expect = 7e-41
Identities = 78/122 (63%), Positives = 88/122 (72%)
Frame = +2
Query: 11 EDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
E AM+EYLKIAQDLEMYGVNYFEIRNKK T+L+LGVDALGLNIY+K D+L+PK+GFPWSE
Sbjct: 186 EQAMLEYLKIAQDLEMYGVNYFEIRNKKGTDLYLGVDALGLNIYDKADRLSPKVGFPWSE 245
Query: 191 IRNISFNDRKFIIKPIDKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDTIDVQQ 370
IRNISFND+KF+IKPIDKKA KPDTI+VQQ
Sbjct: 246 IRNISFNDKKFVIKPIDKKAHDFVFYAPRLRINKRILALCMGNHELYMRRRKPDTIEVQQ 305
Query: 371 MK 376
MK
Sbjct: 306 MK 307
>U10414-4|AAW30666.1| 641|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform c protein.
Length = 641
Score = 97.5 bits (232), Expect = 3e-21
Identities = 49/123 (39%), Positives = 71/123 (57%)
Frame = +2
Query: 11 EDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
E+A +EYL++AQDLEMYG+ Y+ I N K T+L LG+ A GL IY+ +++TP+ F WSE
Sbjct: 195 EEAELEYLRVAQDLEMYGILYYPICNNKETDLHLGISAQGLGIYKGVNRITPRPFFSWSE 254
Query: 191 IRNISFNDRKFIIKPIDKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDTIDVQQ 370
I+NI F +RKF +K +DK +PDT++VQQ
Sbjct: 255 IKNIQFKNRKFHMKTVDKST--ISFRSRETSIDSSILDLCIGTHNLYLRRRQPDTLEVQQ 312
Query: 371 MKA 379
M++
Sbjct: 313 MRS 315
>U10414-3|AAK68385.1| 709|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform b protein.
Length = 709
Score = 97.5 bits (232), Expect = 3e-21
Identities = 49/123 (39%), Positives = 71/123 (57%)
Frame = +2
Query: 11 EDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
E+A +EYL++AQDLEMYG+ Y+ I N K T+L LG+ A GL IY+ +++TP+ F WSE
Sbjct: 195 EEAELEYLRVAQDLEMYGILYYPICNNKETDLHLGISAQGLGIYKGVNRITPRPFFSWSE 254
Query: 191 IRNISFNDRKFIIKPIDKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDTIDVQQ 370
I+NI F +RKF +K +DK +PDT++VQQ
Sbjct: 255 IKNIQFKNRKFHMKTVDKST--ISFRSRETSIDSSILDLCIGTHNLYLRRRQPDTLEVQQ 312
Query: 371 MKA 379
M++
Sbjct: 313 MRS 315
>U10414-2|AAA19073.1| 654|Caenorhabditis elegans Neurofibromatosis
homolog protein1, isoform a protein.
Length = 654
Score = 97.5 bits (232), Expect = 3e-21
Identities = 49/123 (39%), Positives = 71/123 (57%)
Frame = +2
Query: 11 EDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
E+A +EYL++AQDLEMYG+ Y+ I N K T+L LG+ A GL IY+ +++TP+ F WSE
Sbjct: 195 EEAELEYLRVAQDLEMYGILYYPICNNKETDLHLGISAQGLGIYKGVNRITPRPFFSWSE 254
Query: 191 IRNISFNDRKFIIKPIDKKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPDTIDVQQ 370
I+NI F +RKF +K +DK +PDT++VQQ
Sbjct: 255 IKNIQFKNRKFHMKTVDKST--ISFRSRETSIDSSILDLCIGTHNLYLRRRQPDTLEVQQ 312
Query: 371 MKA 379
M++
Sbjct: 313 MRS 315
>Z69659-4|CAA93487.2| 396|Caenorhabditis elegans Hypothetical
protein F07C6.4a protein.
Length = 396
Score = 52.4 bits (120), Expect = 1e-07
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 20 MMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKD---DKLTPKIGFPWSE 190
M+ ++K+A+ E YG +E N+ N + L + G+ IY + + +TP + +PW
Sbjct: 201 MISFIKLAEKSESYGYRMYEALNENNDKCILSIGYKGIYIYRRSRHQNLITPYLAYPWRV 260
Query: 191 IRNISFNDRKFIIK 232
I N+ + D+KF I+
Sbjct: 261 IDNLYYRDKKFSIE 274
>Z48241-7|CAA88287.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 40.3 bits (90), Expect = 5e-04
Identities = 19/69 (27%), Positives = 39/69 (56%)
Frame = +2
Query: 17 AMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSEIR 196
A +L A+ LEMYG++ ++ + + + +GV A+G+ ++ + K+ + W IR
Sbjct: 207 AEQNFLDHARRLEMYGMDVYDGVDANHLPIEIGVGAVGIKVFHEGIKMNE---YAWVRIR 263
Query: 197 NISFNDRKF 223
+SF ++F
Sbjct: 264 KLSFKKKQF 272
>Z36237-3|CAA85272.1| 1026|Caenorhabditis elegans Hypothetical
protein C48D5.2a protein.
Length = 1026
Score = 40.3 bits (90), Expect = 5e-04
Identities = 19/69 (27%), Positives = 39/69 (56%)
Frame = +2
Query: 17 AMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSEIR 196
A +L A+ LEMYG++ ++ + + + +GV A+G+ ++ + K+ + W IR
Sbjct: 207 AEQNFLDHARRLEMYGMDVYDGVDANHLPIEIGVGAVGIKVFHEGIKMNE---YAWVRIR 263
Query: 197 NISFNDRKF 223
+SF ++F
Sbjct: 264 KLSFKKKQF 272
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 14 DAMMEYLKIAQDLEMYGVNYFE-IRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
+A ++L + L +YG++ F+ I +K + +G+ A G+NIY+ + K F W
Sbjct: 212 EAENQFLDHCKHLALYGIHLFKAISDKDKKPVDVGIGAAGINIYQDEQKTH---SFSWQN 268
Query: 191 IRNISFNDRKFIIK 232
I I + F IK
Sbjct: 269 IIKIGYRRTYFSIK 282
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 14 DAMMEYLKIAQDLEMYGVNYFE-IRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
+A ++L + L +YG++ F+ I +K + +G+ A G+NIY+ + K F W
Sbjct: 201 EAENQFLDHCKHLALYGIHLFKAISDKDKKPVDVGIGAAGINIYQDEQKTH---SFSWQN 257
Query: 191 IRNISFNDRKFIIK 232
I I + F IK
Sbjct: 258 IIKIGYRRTYFSIK 271
>Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 14 DAMMEYLKIAQDLEMYGVNYFE-IRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
+A ++L + L +YG++ F+ I +K + +G+ A G+NIY+ + K F W
Sbjct: 201 EAENQFLDHCKHLALYGIHLFKAISDKDKKPVDVGIGAAGINIYQDEQKTH---SFSWQN 257
Query: 191 IRNISFNDRKFIIK 232
I I + F IK
Sbjct: 258 IIKIGYRRTYFSIK 271
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 14 DAMMEYLKIAQDLEMYGVNYFE-IRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
+A ++L + L +YG++ F+ I +K + +G+ A G+NIY+ + K F W
Sbjct: 201 EAENQFLDHCKHLALYGIHLFKAISDKDKKPVDVGIGAAGINIYQDEQKTH---SFSWQN 257
Query: 191 IRNISFNDRKFIIK 232
I I + F IK
Sbjct: 258 IIKIGYRRTYFSIK 271
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical
protein ZK270.2e protein.
Length = 4541
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 14 DAMMEYLKIAQDLEMYGVNYFE-IRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
+A ++L + L +YG++ F+ I +K + +G+ A G+NIY+ + K F W
Sbjct: 212 EAENQFLDHCKHLALYGIHLFKAISDKDKKPVDVGIGAAGINIYQDEQKTH---SFSWQN 268
Query: 191 IRNISFNDRKFIIK 232
I I + F IK
Sbjct: 269 IIKIGYRRTYFSIK 282
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical
protein ZK270.2d protein.
Length = 4648
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 14 DAMMEYLKIAQDLEMYGVNYFE-IRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
+A ++L + L +YG++ F+ I +K + +G+ A G+NIY+ + K F W
Sbjct: 201 EAENQFLDHCKHLALYGIHLFKAISDKDKKPVDVGIGAAGINIYQDEQKTH---SFSWQN 257
Query: 191 IRNISFNDRKFIIK 232
I I + F IK
Sbjct: 258 IIKIGYRRTYFSIK 271
>Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 14 DAMMEYLKIAQDLEMYGVNYFE-IRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
+A ++L + L +YG++ F+ I +K + +G+ A G+NIY+ + K F W
Sbjct: 201 EAENQFLDHCKHLALYGIHLFKAISDKDKKPVDVGIGAAGINIYQDEQKTH---SFSWQN 257
Query: 191 IRNISFNDRKFIIK 232
I I + F IK
Sbjct: 258 IIKIGYRRTYFSIK 271
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical
protein ZK270.2a protein.
Length = 4530
Score = 38.7 bits (86), Expect = 0.002
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +2
Query: 14 DAMMEYLKIAQDLEMYGVNYFE-IRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSE 190
+A ++L + L +YG++ F+ I +K + +G+ A G+NIY+ + K F W
Sbjct: 201 EAENQFLDHCKHLALYGIHLFKAISDKDKKPVDVGIGAAGINIYQDEQKTH---SFSWQN 257
Query: 191 IRNISFNDRKFIIK 232
I I + F IK
Sbjct: 258 IIKIGYRRTYFSIK 271
>U80955-5|AAG01559.2| 573|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform a protein.
Length = 573
Score = 35.9 bits (79), Expect = 0.011
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +2
Query: 17 AMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSEIR 196
A + YL A+ +EMYGV+ + K LG+ G+ +++ K+ F W +++
Sbjct: 209 AELNYLNKARWIEMYGVDMHIVEGKDGNTYRLGLTPQGMLVFDGPQKIGL---FLWEKLQ 265
Query: 197 NISFNDRKFII 229
+ F ++K +
Sbjct: 266 KLDFKNKKITL 276
>U80955-4|ABB51180.1| 589|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 2,
isoform b protein.
Length = 589
Score = 35.9 bits (79), Expect = 0.011
Identities = 18/71 (25%), Positives = 36/71 (50%)
Frame = +2
Query: 17 AMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSEIR 196
A + YL A+ +EMYGV+ + K LG+ G+ +++ K+ F W +++
Sbjct: 225 AELNYLNKARWIEMYGVDMHIVEGKDGNTYRLGLTPQGMLVFDGPQKIGL---FLWEKLQ 281
Query: 197 NISFNDRKFII 229
+ F ++K +
Sbjct: 282 KLDFKNKKITL 292
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 35.5 bits (78), Expect = 0.014
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +2
Query: 32 LKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEKDDKLTPKIGFPWSEIRNISFN 211
L++A+ + YGV ++ + L V LG+ ++ + L F W+ IR +SF
Sbjct: 225 LEVARRCDFYGVKLHAAKDIDGNDAALSVMHLGIKVFRQ---LQLDTTFSWARIRKLSFK 281
Query: 212 DRKFIIK 232
+K ++K
Sbjct: 282 RKKLLVK 288
>AL023811-1|CAA19422.2| 947|Caenorhabditis elegans Hypothetical
protein C51F7.1 protein.
Length = 947
Score = 31.5 bits (68), Expect = 0.23
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 41 AQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYE--KDDKLTPKIGFPWSEIRNISFND 214
A + +YG+ ++ N N L G++A G+ + + +D P WS + +SFN
Sbjct: 258 ALNCHLYGLRRHKMDNTDNAVL--GINAKGIEMCDIGEDGDRIPLRSLSWSRVAKLSFNR 315
Query: 215 RKFII 229
+K I
Sbjct: 316 KKMTI 320
>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 5
protein.
Length = 1434
Score = 30.7 bits (66), Expect = 0.40
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 98 TELWLGVDALGLNIYEKDDKLTPKIG-FPWSEIRNISFNDRKFII 229
+ LW+G+ G++IYE+ I W + + + F+ ++F+I
Sbjct: 796 SSLWIGIMPRGISIYEQQGGAREVIAEHVWPQTQTLQFDKKRFVI 840
>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
protein Y38C1AB.4 protein.
Length = 1393
Score = 30.7 bits (66), Expect = 0.40
Identities = 12/45 (26%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 98 TELWLGVDALGLNIYEKDDKLTPKIG-FPWSEIRNISFNDRKFII 229
+ LW+G+ G++IYE+ I W + + + F+ ++F+I
Sbjct: 755 SSLWIGIMPRGISIYEQQGGAREVIAEHVWPQTQTLQFDKKRFVI 799
>AC024753-6|AAF60458.2| 407|Caenorhabditis elegans Hypothetical
protein Y23H5B.4 protein.
Length = 407
Score = 28.3 bits (60), Expect = 2.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 326 SSWLPMHSAXMRLLTRTRGAKNTKRAPSC 240
S WL ++ A +R L RG+++ R P C
Sbjct: 119 SLWLTVNMAILRFLVLYRGSRSETRIPQC 147
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 14 DAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLN 136
DA +Y+ + + L+ YGV +F ++ K + L LG+N
Sbjct: 321 DAKSKYVHLCRGLKTYGVTFFVVKEKLPGKNKLVPRLLGVN 361
>AC025726-18|AAK73910.1| 996|Caenorhabditis elegans Hypothetical
protein Y71G12B.11b protein.
Length = 996
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 14 DAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLN 136
DA +Y+ + + L+ YGV +F ++ K + L LG+N
Sbjct: 321 DAKSKYVHLCRGLKTYGVTFFVVKEKLPGKNKLVPRLLGVN 361
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 14 DAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLN 136
DA +Y+ + + L+ YGV +F ++ K + L LG+N
Sbjct: 321 DAKSKYVHLCRGLKTYGVTFFVVKEKLPGKNKLVPRLLGVN 361
>U64848-13|AAY86245.1| 339|Caenorhabditis elegans Hypothetical
protein C50E3.15 protein.
Length = 339
Score = 26.2 bits (55), Expect = 8.7
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 32 LKIAQDLEMYGVNYFEIRNKKNTELW-LGVDALGLNIYEKDDKLTPKIGFPWSEIRNISF 208
LK ++ + + Y K++E W + +D +Y DD L K G+ W +
Sbjct: 107 LKTCEEGWKFTLRYNAAYCLKDSEKWGMWIDGKHNGLYFDDDTLHFKAGYNWDDGEPNGI 166
Query: 209 NDRKFII 229
R+F +
Sbjct: 167 GGRRFCL 173
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 7 RRRRHDGIPEDRSGPGDVRRQLLRDPQQEKHRAMAR 114
R+RR P+ R P + R+ R P++E+ R+ R
Sbjct: 152 RKRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPKR 187
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 26.2 bits (55), Expect = 8.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 7 RRRRHDGIPEDRSGPGDVRRQLLRDPQQEKHRAMAR 114
R+RR P+ R P + R+ R P++E+ R+ R
Sbjct: 152 RKRRRSPSPKRRRRPSEKPRKRSRSPRRERPRSPKR 187
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,178,851
Number of Sequences: 27780
Number of extensions: 129250
Number of successful extensions: 379
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 343
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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