BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060283.seq
(691 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D557F5 Cluster: PREDICTED: similar to CG13901-PA... 104 2e-21
UniRef50_Q9BVM2 Cluster: Deleted in a mouse model of primary cil... 87 5e-16
UniRef50_A7S7K7 Cluster: Predicted protein; n=1; Nematostella ve... 86 9e-16
UniRef50_UPI00015B40BF Cluster: PREDICTED: similar to LOC1000497... 80 6e-14
UniRef50_UPI0000DB6CF7 Cluster: PREDICTED: similar to CG13901-PA... 78 2e-13
UniRef50_Q9W0M5 Cluster: CG13901-PA; n=4; Diptera|Rep: CG13901-P... 76 9e-13
UniRef50_A0EBR8 Cluster: Chromosome undetermined scaffold_88, wh... 69 1e-10
UniRef50_Q7QLC4 Cluster: ENSANGP00000001836; n=1; Anopheles gamb... 64 3e-09
UniRef50_Q4Q862 Cluster: Putative uncharacterized protein; n=6; ... 62 9e-09
UniRef50_A2FD60 Cluster: DPCD protein, putative; n=1; Trichomona... 57 5e-07
UniRef50_Q7R0D4 Cluster: GLP_608_9575_8994; n=1; Giardia lamblia... 49 1e-04
UniRef50_Q8Y804 Cluster: Lmo1115 protein; n=1; Listeria monocyto... 36 0.71
UniRef50_A2F577 Cluster: Putative uncharacterized protein; n=1; ... 34 3.8
UniRef50_Q6W053 Cluster: Olfactory receptor Olfr612; n=9; Theria... 33 5.0
UniRef50_Q057F6 Cluster: Exodeoxyribonuclease V, g chain; n=1; B... 33 5.0
UniRef50_A5FAJ4 Cluster: Putative uncharacterized protein precur... 33 6.6
UniRef50_A3XQK7 Cluster: Putative outer membrane protein; n=1; L... 33 6.6
UniRef50_Q7RIG0 Cluster: Small GTP-binding protein domain, putat... 33 6.6
UniRef50_Q5UQ53 Cluster: Uncharacterized protein R713; n=1; Acan... 33 6.6
UniRef50_Q86HI7 Cluster: Putative uncharacterized protein; n=4; ... 33 8.7
UniRef50_Q5CVC3 Cluster: Putative uncharacterized protein; n=2; ... 33 8.7
>UniRef50_UPI0000D557F5 Cluster: PREDICTED: similar to CG13901-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG13901-PA - Tribolium castaneum
Length = 199
Score = 104 bits (249), Expect = 2e-21
Identities = 48/122 (39%), Positives = 77/122 (63%)
Frame = -3
Query: 617 RAWKVKGKLGGEGKWPCRNW*SHT*CLFQIVIVLK*RMQRPASSIQEEYENKFRMENKNL 438
RAWKVKG++GGEG+W + ++++ +P S + N +NL
Sbjct: 47 RAWKVKGEMGGEGEWDIELGDPEVNPTKEQNLIIRENSGQPVVSRRNTRIN-LEWRIRNL 105
Query: 437 PYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLNIEQANIQSSHHFNTLIIM 258
PYPIETYS++ +N++ C+V++TTNKKY+K ++PEL+RL + + IQ +H +NTLII
Sbjct: 106 PYPIETYSVTVDNEKNCLVVKTTNKKYYKILRVPELDRLRIAPQHEAIQIAHKYNTLIIT 165
Query: 257 YR 252
++
Sbjct: 166 FK 167
>UniRef50_Q9BVM2 Cluster: Deleted in a mouse model of primary
ciliary dyskinesia; n=25; Deuterostomia|Rep: Deleted in
a mouse model of primary ciliary dyskinesia - Homo
sapiens (Human)
Length = 203
Score = 86.6 bits (205), Expect = 5e-16
Identities = 45/123 (36%), Positives = 68/123 (55%)
Frame = -3
Query: 620 VRAWKVKGKLGGEGKWPCRNW*SHT*CLFQIVIVLK*RMQRPASSIQEEYENKFRMENKN 441
VR W+VK LG G+W + L ++++ + F+ +N
Sbjct: 49 VRKWRVKSALGAMGQWQLEVGDPAPLGAGNLGPELIKESNANPIFMRKDTKMSFQWRIRN 108
Query: 440 LPYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLNIEQANIQSSHHFNTLII 261
LPYP + YS+S + ERCI++RTTNKKY+KKF IP+L+R L ++ A + +H TLII
Sbjct: 109 LPYPKDVYSVSVDQKERCIIVRTTNKKYYKKFSIPDLDRHQLPLDDALLSFAHANCTLII 168
Query: 260 MYR 252
Y+
Sbjct: 169 SYQ 171
Score = 35.5 bits (78), Expect = 1.2
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = -2
Query: 282 SFQHINNYV----QKPQQLLDMEKEWYEELKKVKPIKDIPNDCKTQ 157
SF H N + QKP++++ E E +ELKKVK DCKTQ
Sbjct: 158 SFAHANCTLIISYQKPKEVVVAESELQKELKKVKTAHSNDGDCKTQ 203
>UniRef50_A7S7K7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 206
Score = 85.8 bits (203), Expect = 9e-16
Identities = 46/122 (37%), Positives = 67/122 (54%)
Frame = -3
Query: 620 VRAWKVKGKLGGEGKWPCRNW*SHT*CLFQIVIVLK*RMQRPASSIQEEYENKFRMENKN 441
VR WK K LG E KW +++ R I+++ F+ +N
Sbjct: 54 VRKWKKKTTLGKECKWEYEIGEEVQPVNIDSEHIMESRAN--PIFIRKDVNKAFQWRVRN 111
Query: 440 LPYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLNIEQANIQSSHHFNTLII 261
LPYP+E YS++ ++D + I RT NKKYFKKF IP++ R L ++Q++I +H NTLII
Sbjct: 112 LPYPLEVYSVTVDDDRKTITTRTNNKKYFKKFSIPDMVRAELPLDQSSISLAHANNTLII 171
Query: 260 MY 255
Y
Sbjct: 172 SY 173
>UniRef50_UPI00015B40BF Cluster: PREDICTED: similar to LOC100049755
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to LOC100049755 protein - Nasonia vitripennis
Length = 203
Score = 79.8 bits (188), Expect = 6e-14
Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = -3
Query: 617 RAWKVKGKLGGEGKWPCRNW*SHT*CLFQIVIV-LK*RMQRPASSIQEEYENKFRMENKN 441
RAWK KGKLG E W + V ++ P S + + +N
Sbjct: 51 RAWKEKGKLGQEIGWVVEVGDPEPNPADNLESVGIRESSSNPIIS-RRTTKTALEWRIRN 109
Query: 440 LPYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLNIEQANIQSSHHFNTLII 261
L YP + YS++A D+ I +RT+NKKYFKK +P+LER L EQ I +H FNTLII
Sbjct: 110 LSYPKDVYSVTAE-DDGTITVRTSNKKYFKKINVPDLERAGLKPEQDRISFTHQFNTLII 168
Query: 260 MYR 252
Y+
Sbjct: 169 TYK 171
>UniRef50_UPI0000DB6CF7 Cluster: PREDICTED: similar to CG13901-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG13901-PA - Apis mellifera
Length = 166
Score = 78.2 bits (184), Expect = 2e-13
Identities = 47/122 (38%), Positives = 64/122 (52%)
Frame = -3
Query: 617 RAWKVKGKLGGEGKWPCRNW*SHT*CLFQIVIVLK*RMQRPASSIQEEYENKFRMENKNL 438
RAWK KGKLG + W + ++ P + + + +NL
Sbjct: 15 RAWKEKGKLGQDIGWNVEIGDPEPKQNNIDICGIQESSSAPFIT-RRVTKTSLEWRIRNL 73
Query: 437 PYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLNIEQANIQSSHHFNTLIIM 258
PYP YS++A D+ I IRTTNKKYFKK +IP+LER L EQ I +H ++TLII
Sbjct: 74 PYPQNVYSVTAE-DDGTITIRTTNKKYFKKIRIPDLERAGLKPEQDRITFTHQYSTLIIT 132
Query: 257 YR 252
Y+
Sbjct: 133 YK 134
>UniRef50_Q9W0M5 Cluster: CG13901-PA; n=4; Diptera|Rep: CG13901-PA -
Drosophila melanogaster (Fruit fly)
Length = 222
Score = 75.8 bits (178), Expect = 9e-13
Identities = 30/65 (46%), Positives = 48/65 (73%)
Frame = -3
Query: 446 KNLPYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLNIEQANIQSSHHFNTL 267
+N+PY ++TYS++A+ ++R IV+RT+NKKY+K +PEL+R + Q ++ H FNTL
Sbjct: 123 RNMPYSLDTYSVTADPEKRAIVVRTSNKKYYKVIPVPELDRCGVKPAQESLSVHHQFNTL 182
Query: 266 IIMYR 252
II Y+
Sbjct: 183 IITYQ 187
>UniRef50_A0EBR8 Cluster: Chromosome undetermined scaffold_88, whole
genome shotgun sequence; n=3; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_88, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 201
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/77 (37%), Positives = 48/77 (62%)
Frame = -3
Query: 485 IQEEYENKFRMENKNLPYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLNIE 306
++++ F+ +NL YP + Y + + + IVI+TTNKKY+K+F IP++ R NL +E
Sbjct: 90 LRKDTPQHFQFRVRNLSYPEDVYQMEIDEKTQEIVIKTTNKKYYKRFAIPDMRRANLKLE 149
Query: 305 QANIQSSHHFNTLIIMY 255
Q + + NTLI+ Y
Sbjct: 150 QGKVTHVYKNNTLIVSY 166
>UniRef50_Q7QLC4 Cluster: ENSANGP00000001836; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000001836 - Anopheles gambiae
str. PEST
Length = 210
Score = 64.1 bits (149), Expect = 3e-09
Identities = 39/119 (32%), Positives = 60/119 (50%)
Frame = -3
Query: 617 RAWKVKGKLGGEGKWPCRNW*SHT*CLFQIVIVLK*RMQRPASSIQEEYENKFRMENKNL 438
RAWK K L + W S L + +LK P + + N +NL
Sbjct: 50 RAWKNKSTLLHKEDWVLELGESIPAGLKENEEMLKECCTEPLLT-KRVTRNAIEWRIRNL 108
Query: 437 PYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLNIEQANIQSSHHFNTLII 261
PYP+ TY+I+ + +E+ + I+T+N KYFKK +PE +R N +Q ++ + TLII
Sbjct: 109 PYPVTTYTITCSENEKTLTIKTSNNKYFKKINVPEFQRCNFLPKQEHLNVVYKNATLII 167
>UniRef50_Q4Q862 Cluster: Putative uncharacterized protein; n=6;
Trypanosomatidae|Rep: Putative uncharacterized protein -
Leishmania major
Length = 198
Score = 62.5 bits (145), Expect = 9e-09
Identities = 27/82 (32%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Frame = -3
Query: 485 IQEEYENKFRMENKNLPYPIETYSISANNDERC----IVIRTTNKKYFKKFKIPELERLN 318
++++ + + + +NLPYP + +S++ ++ IV+RT+N+KYFK+ IP+LER +
Sbjct: 83 VRQDTKESYVVRIRNLPYPKDVFSVAVEREDGDSVGKIVVRTSNRKYFKRLAIPDLERAH 142
Query: 317 LNIEQANIQSSHHFNTLIIMYR 252
+ +E A++ TLII Y+
Sbjct: 143 IPLESAHLSYDVQHQTLIIQYK 164
>UniRef50_A2FD60 Cluster: DPCD protein, putative; n=1; Trichomonas
vaginalis G3|Rep: DPCD protein, putative - Trichomonas
vaginalis G3
Length = 188
Score = 56.8 bits (131), Expect = 5e-07
Identities = 26/72 (36%), Positives = 45/72 (62%)
Frame = -3
Query: 470 ENKFRMENKNLPYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLNIEQANIQ 291
+N+++ +N+PYP Y+++ + + IVIRTTNKKYFK+ PE E+ + +Q
Sbjct: 89 DNEWQWRVRNIPYPANFYNVTVDEPKNQIVIRTTNKKYFKRIDAPEGEK----FVPSKLQ 144
Query: 290 SSHHFNTLIIMY 255
+ +NTL+I +
Sbjct: 145 WAWSYNTLVIQH 156
>UniRef50_Q7R0D4 Cluster: GLP_608_9575_8994; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_9575_8994 - Giardia lamblia ATCC
50803
Length = 193
Score = 48.8 bits (111), Expect = 1e-04
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Frame = -3
Query: 620 VRAWKVKGKLGGEGKWPCRNW*SHT*CLFQIVIVLK*RMQRPASSIQEEYENKFRMENKN 441
+R W+ + LG E W ++V + P S + + E F + N
Sbjct: 43 LRKWRRRTNLGREMSWEIEVGEVAEASSTEVVAGMYASKSTPTVS-RLDSETAFVFKITN 101
Query: 440 LPYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNL----NIEQANIQSSHHFN 273
LP P Y ++ NDE ++++T NKKYFK+ I +L R L N+ + +Q+ N
Sbjct: 102 LPGPESNYFLTVENDE--LLLKTQNKKYFKRLVIQDLRRAKLPHLANLAKLKLQN----N 155
Query: 272 TLIIMY 255
TLII Y
Sbjct: 156 TLIIAY 161
>UniRef50_Q8Y804 Cluster: Lmo1115 protein; n=1; Listeria
monocytogenes|Rep: Lmo1115 protein - Listeria
monocytogenes
Length = 862
Score = 36.3 bits (80), Expect = 0.71
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = -3
Query: 476 EYENKFRMENKNLPYPIETY--SISANNDERCIVIRT--TNKKYFKKFKIPELERLNLNI 309
EY+ KF EN N YPI Y +++ N+ + RT NK +F +F I +L +
Sbjct: 561 EYDFKFTAENNNATYPIYIYQDTVAVGNETMLKIARTPIINKLHFNEFIIKKLNEQAIFD 620
Query: 308 EQANIQSSH 282
+++ ++ ++
Sbjct: 621 KESGVEFNY 629
>UniRef50_A2F577 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 283
Score = 33.9 bits (74), Expect = 3.8
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 313 FKFSLSSSGILNFLKYFLFVVLITMHLSSLFALIEYVSIGYGRFLFSILNLF 468
F L +S + +FL +F+ V++ +++S LF SIG G FLFSIL F
Sbjct: 104 FLDGLRASLLFSFLCFFMLVMIQQIYISFLFT----ASIGNGFFLFSILPRF 151
>UniRef50_Q6W053 Cluster: Olfactory receptor Olfr612; n=9;
Theria|Rep: Olfactory receptor Olfr612 - Mus musculus
(Mouse)
Length = 317
Score = 33.5 bits (73), Expect = 5.0
Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 1/98 (1%)
Frame = +1
Query: 241 LLRFLYII-INVLK**EDCILACSIFKFSLSSSGILNFLKYFLFVVLITMHLSSLFALIE 417
LL+ LY NVL L I K S SS+ + + + LFVVL TM L L L+
Sbjct: 164 LLKRLYFCHSNVLS--HSYCLHPDIIKLSCSSTTVNSI--FGLFVVLSTMGLDFLLILLS 219
Query: 418 YVSIGYGRFLFSILNLFSYSS*ILEAGLCIRYFSTITI 531
Y I L ++LN+ S+S + CI + + +
Sbjct: 220 YALI-----LKTVLNMASHSGRLKALNTCISHLCAVVL 252
>UniRef50_Q057F6 Cluster: Exodeoxyribonuclease V, g chain; n=1;
Buchnera aphidicola str. Cc (Cinara cedri)|Rep:
Exodeoxyribonuclease V, g chain - Buchnera aphidicola
subsp. Cinara cedri
Length = 1042
Score = 33.5 bits (73), Expect = 5.0
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -3
Query: 368 NKKYFKKFKIPELERLNLNIEQANIQSSHHFNTLIIMYRNLNNYS 234
NKK++K+F IP+L+ + I S FN +Y N+ Y+
Sbjct: 442 NKKHYKEFSIPDLKTYSWEYAIKRITSGFIFNNKNTIYNNIYTYN 486
>UniRef50_A5FAJ4 Cluster: Putative uncharacterized protein
precursor; n=1; Flavobacterium johnsoniae UW101|Rep:
Putative uncharacterized protein precursor -
Flavobacterium johnsoniae UW101
Length = 393
Score = 33.1 bits (72), Expect = 6.6
Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Frame = -3
Query: 611 WKVKGKLGGEGK--WPCRNW*SHT*CLFQIVIVLK*RMQRPASSIQEEYENKFRMENKNL 438
W K L G+ K W + S LF++ L + +I YE +KNL
Sbjct: 119 WTFKDTLAGKTKVTWKAKGTMSF---LFKVYAALNGGSDKVIGTI---YEKSLANIDKNL 172
Query: 437 PYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLN 312
Y +TY++ N V++ T Y K+ E+ ++N N
Sbjct: 173 DYETKTYAVQVNG-----VVKKTETPYIKQTFTSEIPKINKN 209
>UniRef50_A3XQK7 Cluster: Putative outer membrane protein; n=1;
Leeuwenhoekiella blandensis MED217|Rep: Putative outer
membrane protein - Leeuwenhoekiella blandensis MED217
Length = 1857
Score = 33.1 bits (72), Expect = 6.6
Identities = 21/81 (25%), Positives = 36/81 (44%)
Frame = -3
Query: 473 YENKFRMENKNLPYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLNIEQANI 294
Y+N R EN ++ P++++ ++ NN N K K +PE E + +
Sbjct: 921 YDNLSRYENASVYKPLQSFKVTTNN----------NGKATAKINVPEKEGGRYLLRVIDK 970
Query: 293 QSSHHFNTLIIMYRNLNNYST 231
+S H + YRN +N T
Sbjct: 971 ESGHASGLITYFYRNWSNAPT 991
>UniRef50_Q7RIG0 Cluster: Small GTP-binding protein domain,
putative; n=5; Plasmodium (Vinckeia)|Rep: Small
GTP-binding protein domain, putative - Plasmodium yoelii
yoelii
Length = 788
Score = 33.1 bits (72), Expect = 6.6
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Frame = -3
Query: 446 KNLPYPIETYSISANND------ERCIVIRTT--NKKYFKKFKIPELERLNLNIEQANIQ 291
K++ IE Y I N + +C+++ T N+K KKF+I + + + N E NI
Sbjct: 54 KSVINDIENYCIQNNENLITIENNKCLIVDTLGINEKMLKKFEIWKFKNYDKNFENNNI- 112
Query: 290 SSHHFNTLI 264
++FNT+I
Sbjct: 113 IKNYFNTII 121
>UniRef50_Q5UQ53 Cluster: Uncharacterized protein R713; n=1;
Acanthamoeba polyphaga mimivirus|Rep: Uncharacterized
protein R713 - Mimivirus
Length = 976
Score = 33.1 bits (72), Expect = 6.6
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = -3
Query: 488 SIQEEYENKFR-MENKNLPYPIETYSISANNDERCIVIRTTNKKYFKKFKIPE-LERLNL 315
++ +EY + + ++NK + ++ YS+S NN + IV + + K KK I E +E L L
Sbjct: 339 NLTKEYSHTIKTLKNKFVSDDVKNYSLSINNLKIIIVGQDSIKIDVKKIIIGENIELLGL 398
Query: 314 NIEQAN 297
N+E N
Sbjct: 399 NVEYQN 404
>UniRef50_Q86HI7 Cluster: Putative uncharacterized protein; n=4;
Dictyostelium discoideum|Rep: Putative uncharacterized
protein - Dictyostelium discoideum (Slime mold)
Length = 1163
Score = 32.7 bits (71), Expect = 8.7
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = -3
Query: 449 NKNLPYPIETYSISANNDERCIVIRTTNKKYFKKFKIPELERLNLNIEQANIQSSHHFNT 270
N N + Y I NN+ I++ T K K+ K+ E E+ + IE +N+ F
Sbjct: 256 NNNNSISLSNYEIEINNNNNKILVLTPKSKKKKEKKLFENEKKKILIENSNL-IIEGFRE 314
Query: 269 LIIMY-----RNLNNYSTW 228
I Y +NLN ST+
Sbjct: 315 KFIKYNVKYSKNLNMLSTY 333
>UniRef50_Q5CVC3 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 207
Score = 32.7 bits (71), Expect = 8.7
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = -3
Query: 458 RMENKNLPYPIETYSISANNDERCIVIRTTNKKYFKKFKIP----ELERLNLNIEQAN 297
+M+N N P ++ I + + C+++++T K + F++P + + L +NI +AN
Sbjct: 2 KMKNNNYPNKFRSFIIVIHQEYGCLLLKSTKKSEYGIFQLPGGRLDEKDLMINISEAN 59
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,435,468
Number of Sequences: 1657284
Number of extensions: 11404245
Number of successful extensions: 31786
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 30493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31763
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -