Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NV060283.seq
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    24   3.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.9  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.9  
AF525673-2|AAM82610.1|   58|Anopheles gambiae cecropin CecA prot...    23   9.1  
AF200686-1|AAF22649.1|   58|Anopheles gambiae cecropin precursor...    23   9.1  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +2

Query: 89  IGQYLIDLFKLNSIDILVTV 148
           I +YL+  F +N++ ILVTV
Sbjct: 295 IAKYLLFTFIMNTVSILVTV 314


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 505  IRYFSTITI*NRHQVWDHQFLHG 573
            +R   +  I  +H VW H+F+ G
Sbjct: 1199 VRSMDSFGITRKHVVWRHEFVDG 1221


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 505  IRYFSTITI*NRHQVWDHQFLHG 573
            +R   +  I  +H VW H+F+ G
Sbjct: 1200 VRSMDSFGITRKHVVWRHEFVDG 1222


>AF525673-2|AAM82610.1|   58|Anopheles gambiae cecropin CecA
           protein.
          Length = 58

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 343 LNFLKYFLFVVLITMHLSS 399
           +NF K F+FVVL  + L S
Sbjct: 1   MNFSKIFIFVVLAVLLLCS 19


>AF200686-1|AAF22649.1|   58|Anopheles gambiae cecropin precursor
           protein.
          Length = 58

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +1

Query: 343 LNFLKYFLFVVLITMHLSS 399
           +NF K F+FVVL  + L S
Sbjct: 1   MNFSKIFIFVVLAVLLLCS 19


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 625,898
Number of Sequences: 2352
Number of extensions: 11770
Number of successful extensions: 62
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)