Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NV060283.seq
(691 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 24 1.2
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 4.8
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 22 4.8
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 6.3
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 6.3
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 6.3
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 6.3
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 6.3
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 6.3
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 6.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 6.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 6.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 6.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 6.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 6.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 6.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 6.3
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 24.2 bits (50), Expect = 1.2
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 89 IGQYLIDLFKLNSIDILVTV 148
I +YL+ F +N++ ILVTV
Sbjct: 296 IAKYLLFTFIMNTVSILVTV 315
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 4.8
Identities = 12/40 (30%), Positives = 16/40 (40%)
Frame = +3
Query: 318 VQPLKFRYFKLFKVFFVCCSNNYAPFIIVCTNRICFNWVW 437
V PL L++ FF C + F + N IC W
Sbjct: 298 VPPLSLHGQLLWREFFYCAATKNPNFDRMQGNPICVQIPW 337
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 22.2 bits (45), Expect = 4.8
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -2
Query: 681 VRKTGREMVEEYNVDTQVLLR*SLEGERKTWW 586
+R + V EY ++T+ L+ + E WW
Sbjct: 336 IRNYLTKFVSEYWMETRGFLQPVCQNEMNKWW 367
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPP 101
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPP 101
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPP 101
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPP 101
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPP 101
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPP 101
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 81 IIPSHYIEQIPVPVYYGNFPP 101
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPP 350
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPP 350
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPP 350
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPP 350
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPP 350
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPP 350
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 314 IIPSHYIEQIPVPVYYGNFPP 334
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.8 bits (44), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 621 VIKLVYLHYIPLPFLYRSFEP 683
+I Y+ IP+P Y +F P
Sbjct: 330 IIPSHYIEQIPVPVYYGNFPP 350
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,634
Number of Sequences: 438
Number of extensions: 3780
Number of successful extensions: 26
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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